RNA–Protein interactions for RNA: YLR103C

CDC45, Transcript of DNA replication initiation factor, yeastyeast

Gene CDC45, Length 1,953 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC45YLR103C SMC4Q12267 1418 aa5.61□□□□□ -1.51
CDC45YLR103C RQC2Q12532 1038 aaKnown RBP5.6□□□□□ -1.51
CDC45YLR103C MMS22Q06164 1454 aa5.6□□□□□ -1.51
CDC45YLR103C TY1B-BRQ12193 1756 aa5.59□□□□□ -1.51
CDC45YLR103C TY1B-GR3Q12316 1755 aa5.59□□□□□ -1.51
CDC45YLR103C TY1B-ORQ92393 1755 aa5.59□□□□□ -1.51
CDC45YLR103C MYO4P32492 1471 aa5.59□□□□□ -1.52
CDC45YLR103C TY1B-HO13535 1793 aa5.58□□□□□ -1.52
CDC45YLR103C TY1B-DR5P0C2I2 1755 aa5.58□□□□□ -1.52
CDC45YLR103C TY1B-DR6P0C2I3 1755 aa5.58□□□□□ -1.52
CDC45YLR103C TY1B-LR2P0C2I5 1755 aa5.58□□□□□ -1.52
CDC45YLR103C TY1B-LR3P0C2I6 1755 aaKnown RBP5.58□□□□□ -1.52
CDC45YLR103C TY1B-PR1P0C2I9 1755 aaKnown RBP5.58□□□□□ -1.52
CDC45YLR103C TY1B-PR2P0C2J0 1756 aa5.58□□□□□ -1.52
CDC45YLR103C TY1B-PR3P0C2J1 1755 aaKnown RBP5.58□□□□□ -1.52
CDC45YLR103C TY1B-JR1P47098 1755 aa5.58□□□□□ -1.52
CDC45YLR103C TY1B-ML2Q03434 1755 aaKnown RBP5.58□□□□□ -1.52
CDC45YLR103C TY1B-ER1Q03612 1755 aa5.58□□□□□ -1.52
CDC45YLR103C TY1B-ML1Q04711 1755 aaKnown RBP5.58□□□□□ -1.52
CDC45YLR103C TY1B-GR2Q12269 1755 aa5.58□□□□□ -1.52
CDC45YLR103C TY1B-OLQ12273 1755 aa5.58□□□□□ -1.52
CDC45YLR103C TY1B-PLQ12414 1755 aaKnown RBP5.58□□□□□ -1.52
CDC45YLR103C BBC1P47068 1157 aa5.58□□□□□ -1.52
CDC45YLR103C SAS10Q12136 610 aaPredicted RBP5.58□□□□□ -1.52
CDC45YLR103C CDC25P04821 1589 aa5.56□□□□□ -1.52
CDC45YLR103C PSD2P53037 1138 aaKnown RBP5.54□□□□□ -1.52
CDC45YLR103C SPP41P38904 1435 aa5.53□□□□□ -1.52
CDC45YLR103C ESC1Q03661 1658 aaKnown RBP5.53□□□□□ -1.52
CDC45YLR103C PAN1P32521 1480 aa5.52□□□□□ -1.53
CDC45YLR103C MST1P07236 462 aa5.52□□□□□ -1.53
CDC45YLR103C SNQ2P32568 1501 aaKnown RBP5.51□□□□□ -1.53
CDC45YLR103C STH1P32597 1359 aa5.51□□□□□ -1.53
CDC45YLR103C MLP2P40457 1679 aa5.5□□□□□ -1.53
CDC45YLR103C VTH1P40438 1549 aa5.49□□□□□ -1.53
CDC45YLR103C VTH2P40890 1549 aa5.49□□□□□ -1.53
CDC45YLR103C NSR1P27476 414 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
CDC45YLR103C TSC11P40061 1430 aa5.49□□□□□ -1.53
CDC45YLR103C TAF7Q05021 590 aa5.49□□□□□ -1.53
CDC45YLR103C TY1B-JR2P47100 1755 aaKnown RBP5.49□□□□□ -1.53
CDC45YLR103C TY1B-ER2Q03619 1755 aa5.49□□□□□ -1.53
CDC45YLR103C TY1B-MR1Q04214 1755 aa5.49□□□□□ -1.53
CDC45YLR103C TY1B-MR2Q04670 1755 aaKnown RBP5.49□□□□□ -1.53
CDC45YLR103C TY1B-LR1Q12088 1755 aaKnown RBP5.49□□□□□ -1.53
CDC45YLR103C TY1B-NL1Q12112 1755 aa5.49□□□□□ -1.53
CDC45YLR103C TY1B-GR1Q12141 1755 aa5.49□□□□□ -1.53
CDC45YLR103C TY1B-BLQ12490 1755 aa5.49□□□□□ -1.53
CDC45YLR103C DNF1P32660 1571 aa5.48□□□□□ -1.53
CDC45YLR103C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53 RIP-Chip
CDC45YLR103C TRM732Q03496 1420 aa5.47□□□□□ -1.53
CDC45YLR103C RPA190P10964 1664 aaKnown RBP5.47□□□□□ -1.53
CDC45YLR103C PDR15Q04182 1529 aaKnown RBP5.46□□□□□ -1.54
CDC45YLR103C YOR238WQ08634 303 aa5.46□□□□□ -1.54
CDC45YLR103C ULS1Q08562 1619 aa5.45□□□□□ -1.54
CDC45YLR103C IFH1P39520 1085 aa5.44□□□□□ -1.54
CDC45YLR103C MGA2P40578 1113 aa5.44□□□□□ -1.54
CDC45YLR103C CST9Q06032 482 aa5.44□□□□□ -1.54
CDC45YLR103C NTE1Q04958 1679 aa5.43□□□□□ -1.54
CDC45YLR103C MRM1P25270 412 aa5.43□□□□□ -1.54
CDC45YLR103C YAP5P40574 245 aa5.43□□□□□ -1.54
CDC45YLR103C RPO21P04050 1733 aaKnown RBP5.42□□□□□ -1.54
CDC45YLR103C SNT2P53127 1403 aa5.42□□□□□ -1.54
CDC45YLR103C YBL029C-AQ3E756 94 aa5.41□□□□□ -1.54
CDC45YLR103C GEA1P47102 1408 aaPredicted RBP5.41□□□□□ -1.54
CDC45YLR103C RTT106P40161 455 aa5.4□□□□□ -1.54
CDC45YLR103C NUP159P40477 1460 aa5.4□□□□□ -1.55
CDC45YLR103C MET5P47169 1442 aa5.37□□□□□ -1.55
CDC45YLR103C YRF1-1P0CX20 1796 aa5.37□□□□□ -1.55
CDC45YLR103C YRF1-5P0CX21 1796 aa5.37□□□□□ -1.55
CDC45YLR103C YRF1-8P0CX22 1796 aa5.37□□□□□ -1.55
CDC45YLR103C GEA2P39993 1459 aaKnown RBP5.37□□□□□ -1.55
CDC45YLR103C IKI3Q06706 1349 aaKnown RBP5.36□□□□□ -1.55
CDC45YLR103C VNX1P42839 908 aa5.36□□□□□ -1.55
CDC45YLR103C TY3B-GQ99315 1547 aa5.35□□□□□ -1.55
CDC45YLR103C VPS29P38759 282 aa5.35□□□□□ -1.55
CDC45YLR103C PIB1Q06651 286 aa5.35□□□□□ -1.55
CDC45YLR103C IRC20Q06554 1556 aa5.34□□□□□ -1.55
CDC45YLR103C VPS15P22219 1454 aa5.34□□□□□ -1.55
CDC45YLR103C YBT1P32386 1661 aa5.34□□□□□ -1.56
CDC45YLR103C MET10P39692 1035 aa5.33□□□□□ -1.56
CDC45YLR103C SPO14P36126 1683 aa5.32□□□□□ -1.56
CDC45YLR103C RCR1P38212 213 aa5.32□□□□□ -1.56
CDC45YLR103C WSC3Q12215 556 aa5.32□□□□□ -1.56
CDC45YLR103C CAT8P39113 1433 aa5.31□□□□□ -1.56
CDC45YLR103C NUP170P38181 1502 aa5.31□□□□□ -1.56
CDC45YLR103C PDR12Q02785 1511 aa5.31□□□□□ -1.56
CDC45YLR103C RTG3P38165 486 aa5.29□□□□□ -1.56
CDC45YLR103C SSM4P40318 1319 aa5.29□□□□□ -1.56
CDC45YLR103C GDB1Q06625 1536 aa5.29□□□□□ -1.56
CDC45YLR103C PDR10P51533 1564 aa5.29□□□□□ -1.56
CDC45YLR103C NUP157P40064 1391 aaKnown RBP5.29□□□□□ -1.56
CDC45YLR103C STS1P38637 319 aa5.28□□□□□ -1.56
CDC45YLR103C DMA1P38823 416 aa5.28□□□□□ -1.56
CDC45YLR103C YMR1P47147 688 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
CDC45YLR103C CKB1P43639 278 aa5.27□□□□□ -1.57
CDC45YLR103C SPP1Q03012 353 aa5.27□□□□□ -1.57
CDC45YLR103C GTT3P39996 337 aa5.27□□□□□ -1.57
CDC45YLR103C YFR006WP43590 535 aa5.27□□□□□ -1.57
CDC45YLR103C ARO1P08566 1588 aaKnown RBP5.26□□□□□ -1.57
CDC45YLR103C DBP1P24784 617 aaKnown RBP5.26□□□□□ -1.57
CDC45YLR103C LTE1P07866 1435 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms