RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeastyeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRT3YLR097C MSB4Q12317 492 aa8.7□□□□□ -1.02
HRT3YLR097C DCW1P36091 449 aa8.69□□□□□ -1.02
HRT3YLR097C COX6P00427 148 aa8.68□□□□□ -1.02
HRT3YLR097C VHR2P40041 505 aa8.68□□□□□ -1.02
HRT3YLR097C YGR273CP53329 174 aa8.67□□□□□ -1.02
HRT3YLR097C WSC3Q12215 556 aa8.67□□□□□ -1.02
HRT3YLR097C UBP14P38237 781 aaKnown RBP8.66□□□□□ -1.02
HRT3YLR097C HTA1P04911 132 aaKnown RBP8.65□□□□□ -1.02
HRT3YLR097C HTA2P04912 132 aa8.65□□□□□ -1.02
HRT3YLR097C IES2P40154 320 aa8.64□□□□□ -1.03
HRT3YLR097C SOL3P38858 249 aa8.63□□□□□ -1.03
HRT3YLR097C YNR021WP53723 404 aaKnown RBP8.63□□□□□ -1.03
HRT3YLR097C YLR326WQ06170 240 aaKnown RBP8.63□□□□□ -1.03
HRT3YLR097C KIC1P38692 1080 aa8.62□□□□□ -1.03
HRT3YLR097C EAP1P36041 632 aaKnown RBP8.61□□□□□ -1.03
HRT3YLR097C YDR090CQ03193 310 aa8.61□□□□□ -1.03
HRT3YLR097C TAF7Q05021 590 aa8.6□□□□□ -1.03
HRT3YLR097C YBL029C-AQ3E756 94 aa8.6□□□□□ -1.03
HRT3YLR097C KEX1P09620 729 aa8.59□□□□□ -1.03
HRT3YLR097C NUP42P49686 430 aaKnown RBP8.59□□□□□ -1.03
HRT3YLR097C RAD54P32863 898 aa8.58□□□□□ -1.04
HRT3YLR097C VNX1P42839 908 aa8.58□□□□□ -1.04
HRT3YLR097C DIT2P21595 489 aa8.57□□□□□ -1.04
HRT3YLR097C NST1P53935 1240 aa8.57□□□□□ -1.04
HRT3YLR097C TRP5P00931 707 aaKnown RBP8.54□□□□□ -1.04
HRT3YLR097C AI4P03878 556 aa8.54□□□□□ -1.04
HRT3YLR097C MPH3P0CE00 602 aa8.54□□□□□ -1.04
HRT3YLR097C PCS60P38137 543 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
HRT3YLR097C TIF11P38912 153 aaKnown RBP8.54□□□□□ -1.04
HRT3YLR097C YEL023CP39992 682 aa8.54□□□□□ -1.04
HRT3YLR097C GLC3P32775 704 aa8.53□□□□□ -1.04
HRT3YLR097C ULI1P43604 169 aa8.53□□□□□ -1.04
HRT3YLR097C AIM7Q12156 149 aa8.53□□□□□ -1.04
HRT3YLR097C SPP1Q03012 353 aa8.52□□□□□ -1.05
HRT3YLR097C KIN1P13185 1064 aa8.51□□□□□ -1.05
HRT3YLR097C PTC4P38089 393 aa8.51□□□□□ -1.05
HRT3YLR097C JIP4Q03361 876 aa8.5□□□□□ -1.05
HRT3YLR097C ATF2P53296 535 aa8.49□□□□□ -1.05
HRT3YLR097C ILV3P39522 585 aaKnown RBP8.48□□□□□ -1.05
HRT3YLR097C DAN4P47179 1161 aa8.48□□□□□ -1.05
HRT3YLR097C PSE1P32337 1089 aaKnown RBP8.46□□□□□ -1.06
HRT3YLR097C IOC2Q12072 812 aa8.44□□□□□ -1.06
HRT3YLR097C RPP1BP10622 106 aaKnown RBP8.42□□□□□ -1.06
HRT3YLR097C SLI15P38283 698 aa8.42□□□□□ -1.06
HRT3YLR097C ORC6P38826 435 aa8.42□□□□□ -1.06
HRT3YLR097C DMA2P53924 522 aa8.42□□□□□ -1.06
HRT3YLR097C YNL035CP53962 389 aaKnown RBP8.42□□□□□ -1.06
HRT3YLR097C LDB19Q12502 818 aa8.38□□□□□ -1.07
HRT3YLR097C RTG1P32607 177 aa8.37□□□□□ -1.07
HRT3YLR097C SEC61P32915 480 aa8.36□□□□□ -1.07
HRT3YLR097C CSC1Q06538 782 aa8.35□□□□□ -1.07
HRT3YLR097C RGR1P19263 1082 aa8.34□□□□□ -1.07
HRT3YLR097C PML39Q03760 334 aa8.34□□□□□ -1.07
HRT3YLR097C MVP1P40959 511 aaKnown RBP8.33□□□□□ -1.08
HRT3YLR097C TEA1P47988 759 aa8.33□□□□□ -1.08
HRT3YLR097C CDC73Q06697 393 aa8.33□□□□□ -1.08
HRT3YLR097C GAP1P19145 602 aaPredicted RBP8.32□□□□□ -1.08
HRT3YLR097C CLB5P30283 435 aa8.32□□□□□ -1.08
HRT3YLR097C TFG1P41895 735 aaPredicted RBP8.32□□□□□ -1.08
HRT3YLR097C HGH1P48362 394 aaKnown RBP8.32□□□□□ -1.08
HRT3YLR097C GUA1P38625 525 aaKnown RBP8.31□□□□□ -1.08
HRT3YLR097C MID1P41821 548 aa8.31□□□□□ -1.08
HRT3YLR097C TFB4Q12004 338 aa8.31□□□□□ -1.08
HRT3YLR097C PEX21P50091 288 aa8.3□□□□□ -1.08
HRT3YLR097C NCR1Q12200 1170 aa8.3□□□□□ -1.08
HRT3YLR097C DPL1Q05567 589 aa8.29□□□□□ -1.08
HRT3YLR097C PEX29Q03370 554 aa8.28□□□□□ -1.08
HRT3YLR097C YPR109WQ06104 294 aa8.27□□□□□ -1.09
HRT3YLR097C MPC54Q08550 464 aa8.27□□□□□ -1.09
HRT3YLR097C HPC2Q01448 625 aa8.26□□□□□ -1.09
HRT3YLR097C YDL129WQ07555 291 aa8.26□□□□□ -1.09
HRT3YLR097C CSN12P47130 423 aa8.25□□□□□ -1.09
HRT3YLR097C SSA2P10592 639 aaKnown RBP8.24□□□□□ -1.09
HRT3YLR097C ISU2Q12056 156 aa8.23□□□□□ -1.09
HRT3YLR097C FKH1P40466 484 aa8.22□□□□□ -1.09
HRT3YLR097C TUM1Q08686 304 aaKnown RBP8.22□□□□□ -1.09
HRT3YLR097C NMA111P53920 997 aa8.2□□□□□ -1.1
HRT3YLR097C NIS1P53939 407 aa8.2□□□□□ -1.1
HRT3YLR097C YMR196WQ04336 1088 aa8.2□□□□□ -1.1
HRT3YLR097C YRR1Q12172 810 aa8.19□□□□□ -1.1
HRT3YLR097C BRL1P38770 471 aa8.18□□□□□ -1.1
HRT3YLR097C SAP30P38429 201 aa8.17□□□□□ -1.1
HRT3YLR097C FPK1P53739 893 aa8.17□□□□□ -1.1
HRT3YLR097C TFB3Q03290 321 aa8.17□□□□□ -1.1
HRT3YLR097C GLN1P32288 370 aaKnown RBP8.16□□□□□ -1.1
HRT3YLR097C HST2P53686 357 aa8.16□□□□□ -1.1
HRT3YLR097C TYW1Q08960 810 aaKnown RBP8.15□□□□□ -1.1
HRT3YLR097C AIR2Q12476 344 aaKnown RBP8.15□□□□□ -1.1
HRT3YLR097C SIT4P20604 311 aa8.14□□□□□ -1.11
HRT3YLR097C KTR1P27810 393 aaKnown RBP8.14□□□□□ -1.11
HRT3YLR097C HAP5Q02516 242 aa8.14□□□□□ -1.11
HRT3YLR097C RLF2Q12495 606 aa8.14□□□□□ -1.11
HRT3YLR097C ARH1P48360 493 aa8.13□□□□□ -1.11
HRT3YLR097C MMP1Q12372 583 aa8.13□□□□□ -1.11
HRT3YLR097C NUD1P32336 851 aa8.09□□□□□ -1.11
HRT3YLR097C ELP4Q02884 456 aaKnown RBP8.09□□□□□ -1.11
HRT3YLR097C ESS1P22696 170 aa8.08□□□□□ -1.12
HRT3YLR097C SCJ1P25303 377 aa8.08□□□□□ -1.12
HRT3YLR097C RTF1P53064 558 aa8.08□□□□□ -1.12
HRT3YLR097C PKC1P24583 1151 aa8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms