RNA–Protein interactions for RNA: YKL185W

ASH1, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene ASH1, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cellular bud, Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASH1YKL185W DCD1P06773 312 aa7.9□□□□□ -1.14
ASH1YKL185W TFC8Q12308 588 aa7.9□□□□□ -1.14
ASH1YKL185W TY1B-BRQ12193 1756 aa7.89□□□□□ -1.15
ASH1YKL185W TY1B-GR3Q12316 1755 aa7.89□□□□□ -1.15
ASH1YKL185W TY1B-ORQ92393 1755 aa7.89□□□□□ -1.15
ASH1YKL185W NSR1P27476 414 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
ASH1YKL185W OXP1P28273 1286 aa7.87□□□□□ -1.15
ASH1YKL185W PDR15Q04182 1529 aaKnown RBP7.86□□□□□ -1.15
ASH1YKL185W STH1P32597 1359 aa7.85□□□□□ -1.15
ASH1YKL185W ULS1Q08562 1619 aa7.85□□□□□ -1.15
ASH1YKL185W IKI3Q06706 1349 aaKnown RBP7.83□□□□□ -1.16
ASH1YKL185W NUP170P38181 1502 aa7.83□□□□□ -1.16
ASH1YKL185W TAF7Q05021 590 aa7.82□□□□□ -1.16
ASH1YKL185W SPP41P38904 1435 aa7.82□□□□□ -1.16
ASH1YKL185W CDC25P04821 1589 aa7.79□□□□□ -1.16
ASH1YKL185W VTH1P40438 1549 aa7.79□□□□□ -1.16
ASH1YKL185W VTH2P40890 1549 aa7.79□□□□□ -1.16
ASH1YKL185W TY1B-JR2P47100 1755 aaKnown RBP7.79□□□□□ -1.16
ASH1YKL185W TY1B-ER2Q03619 1755 aa7.79□□□□□ -1.16
ASH1YKL185W TY1B-MR1Q04214 1755 aa7.79□□□□□ -1.16
ASH1YKL185W TY1B-MR2Q04670 1755 aaKnown RBP7.79□□□□□ -1.16
ASH1YKL185W TY1B-LR1Q12088 1755 aaKnown RBP7.79□□□□□ -1.16
ASH1YKL185W TY1B-NL1Q12112 1755 aa7.79□□□□□ -1.16
ASH1YKL185W TY1B-GR1Q12141 1755 aa7.79□□□□□ -1.16
ASH1YKL185W TY1B-BLQ12490 1755 aa7.79□□□□□ -1.16
ASH1YKL185W GEA1P47102 1408 aaPredicted RBP7.78□□□□□ -1.16
ASH1YKL185W YGL015CP33199 130 aa7.76□□□□□ -1.17
ASH1YKL185W ESC1Q03661 1658 aaKnown RBP7.75□□□□□ -1.17
ASH1YKL185W TSC11P40061 1430 aa7.75□□□□□ -1.17
ASH1YKL185W YIL055CP40523 627 aaKnown RBP7.75□□□□□ -1.17
ASH1YKL185W YAH1Q12184 172 aaKnown RBP7.75□□□□□ -1.17
ASH1YKL185W PTP3P40048 928 aa7.74□□□□□ -1.17
ASH1YKL185W TY3B-GQ99315 1547 aa7.74□□□□□ -1.17
ASH1YKL185W IFH1P39520 1085 aa7.73□□□□□ -1.17
ASH1YKL185W RQC2Q12532 1038 aaKnown RBP7.73□□□□□ -1.17
ASH1YKL185W SSM4P40318 1319 aa7.73□□□□□ -1.17
ASH1YKL185W PAN1P32521 1480 aa7.72□□□□□ -1.17
ASH1YKL185W YBT1P32386 1661 aa7.71□□□□□ -1.17
ASH1YKL185W NTE1Q04958 1679 aa7.71□□□□□ -1.18
ASH1YKL185W SNT2P53127 1403 aa7.69□□□□□ -1.18
ASH1YKL185W RPO21P04050 1733 aaKnown RBP7.68□□□□□ -1.18
ASH1YKL185W RPA190P10964 1664 aaKnown RBP7.68□□□□□ -1.18
ASH1YKL185W BCH2P36122 765 aa7.68□□□□□ -1.18
ASH1YKL185W IRC20Q06554 1556 aa7.66□□□□□ -1.18
ASH1YKL185W MAP2P38174 421 aaKnown RBP7.66□□□□□ -1.18
ASH1YKL185W SSP1P38871 571 aa7.64□□□□□ -1.19
ASH1YKL185W DNF1P32660 1571 aa7.63□□□□□ -1.19
ASH1YKL185W GEA2P39993 1459 aaKnown RBP7.63□□□□□ -1.19
ASH1YKL185W RSM7P47150 247 aa7.63□□□□□ -1.19
ASH1YKL185W UBP10P53874 792 aaPredicted RBP7.63□□□□□ -1.19
ASH1YKL185W VPS15P22219 1454 aa7.62□□□□□ -1.19
ASH1YKL185W YLR271WQ06152 274 aa7.61□□□□□ -1.19
ASH1YKL185W SCY1P53009 804 aa7.61□□□□□ -1.19
ASH1YKL185W CAT8P39113 1433 aa7.58□□□□□ -1.2
ASH1YKL185W ENP1P38333 483 aaKnown RBP7.56□□□□□ -1.2
ASH1YKL185W RTT106P40161 455 aa7.55□□□□□ -1.2
ASH1YKL185W ARO1P08566 1588 aaKnown RBP7.55□□□□□ -1.2
ASH1YKL185W GDB1Q06625 1536 aa7.54□□□□□ -1.2
ASH1YKL185W NUP159P40477 1460 aa7.54□□□□□ -1.2
ASH1YKL185W POL5P39985 1022 aaKnown RBP7.54□□□□□ -1.2
ASH1YKL185W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
ASH1YKL185W EPS1P40557 701 aa7.53□□□□□ -1.2
ASH1YKL185W PDR10P51533 1564 aa7.52□□□□□ -1.2
ASH1YKL185W SPO14P36126 1683 aa7.52□□□□□ -1.21
ASH1YKL185W YRF1-1P0CX20 1796 aa7.52□□□□□ -1.21
ASH1YKL185W YRF1-5P0CX21 1796 aa7.52□□□□□ -1.21
ASH1YKL185W YRF1-8P0CX22 1796 aa7.52□□□□□ -1.21
ASH1YKL185W AI2P03876 854 aa7.52□□□□□ -1.21
ASH1YKL185W GCN2P15442 1659 aa7.51□□□□□ -1.21
ASH1YKL185W PDR12Q02785 1511 aa7.51□□□□□ -1.21
ASH1YKL185W SRB8P25648 1427 aa7.51□□□□□ -1.21
ASH1YKL185W BDF1P35817 686 aa7.48□□□□□ -1.21
ASH1YKL185W BBC1P47068 1157 aa7.48□□□□□ -1.21
ASH1YKL185W SPT7P35177 1332 aa7.47□□□□□ -1.21
ASH1YKL185W BUD3P25558 1636 aa7.46□□□□□ -1.21
ASH1YKL185W SLX5P32828 619 aaKnown RBP7.46□□□□□ -1.22
ASH1YKL185W NUP157P40064 1391 aaKnown RBP7.43□□□□□ -1.22
ASH1YKL185W CKB1P43639 278 aa7.43□□□□□ -1.22
ASH1YKL185W PSD2P53037 1138 aaKnown RBP7.42□□□□□ -1.22
ASH1YKL185W SEC3P33332 1336 aaKnown RBP7.42□□□□□ -1.22
ASH1YKL185W MET10P39692 1035 aa7.41□□□□□ -1.22
ASH1YKL185W IQG1Q12280 1495 aa7.4□□□□□ -1.23
ASH1YKL185W MGA2P40578 1113 aa7.39□□□□□ -1.23
ASH1YKL185W MET5P47169 1442 aa7.39□□□□□ -1.23
ASH1YKL185W YSP2Q06681 1438 aa7.38□□□□□ -1.23
ASH1YKL185W PDR5P33302 1511 aaKnown RBP7.38□□□□□ -1.23
ASH1YKL185W MMS1Q06211 1407 aa7.38□□□□□ -1.23
ASH1YKL185W YOR093CQ12275 1648 aa7.38□□□□□ -1.23
ASH1YKL185W CST9Q06032 482 aa7.38□□□□□ -1.23
ASH1YKL185W BUD21Q08492 214 aaPredicted RBP7.36□□□□□ -1.23
ASH1YKL185W CHC1P22137 1653 aaKnown RBP7.35□□□□□ -1.23
ASH1YKL185W SEC7P11075 2009 aaKnown RBP7.35□□□□□ -1.23
ASH1YKL185W PRS1P32895 427 aaKnown RBP7.34□□□□□ -1.23
ASH1YKL185W LEU3P08638 886 aa7.33□□□□□ -1.24
ASH1YKL185W TIF4632P39936 914 aaKnown RBP7.33□□□□□ -1.24
ASH1YKL185W NOP7P53261 605 aaKnown RBP7.33□□□□□ -1.24
ASH1YKL185W MRM1P25270 412 aa7.29□□□□□ -1.24
ASH1YKL185W BNR1P40450 1375 aa7.28□□□□□ -1.24
ASH1YKL185W LTE1P07866 1435 aa7.28□□□□□ -1.24
ASH1YKL185W DOP1Q03921 1698 aa7.27□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms