RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeastyeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT3YKL146W TAF7Q05021 590 aa7.78□□□□□ -1.16
AVT3YKL146W MLP2P40457 1679 aa7.77□□□□□ -1.17
AVT3YKL146W NTE1Q04958 1679 aa7.72□□□□□ -1.17
AVT3YKL146W PDR15Q04182 1529 aaKnown RBP7.72□□□□□ -1.17
AVT3YKL146W RPO21P04050 1733 aaKnown RBP7.7□□□□□ -1.18
AVT3YKL146W ULS1Q08562 1619 aa7.7□□□□□ -1.18
AVT3YKL146W MET5P47169 1442 aa7.7□□□□□ -1.18
AVT3YKL146W SNT2P53127 1403 aa7.7□□□□□ -1.18
AVT3YKL146W IFH1P39520 1085 aa7.69□□□□□ -1.18
AVT3YKL146W RTT106P40161 455 aa7.68□□□□□ -1.18
AVT3YKL146W NUP159P40477 1460 aa7.68□□□□□ -1.18
AVT3YKL146W GEA1P47102 1408 aaPredicted RBP7.64□□□□□ -1.19
AVT3YKL146W YRF1-1P0CX20 1796 aa7.64□□□□□ -1.19
AVT3YKL146W YRF1-5P0CX21 1796 aa7.64□□□□□ -1.19
AVT3YKL146W YRF1-8P0CX22 1796 aa7.64□□□□□ -1.19
AVT3YKL146W GEA2P39993 1459 aaKnown RBP7.63□□□□□ -1.19
AVT3YKL146W MET10P39692 1035 aa7.59□□□□□ -1.19
AVT3YKL146W IRC20Q06554 1556 aa7.58□□□□□ -1.2
AVT3YKL146W VPS15P22219 1454 aa7.57□□□□□ -1.2
AVT3YKL146W AVT3P36062 692 aa7.56□□□□□ -1.2
AVT3YKL146W SPO14P36126 1683 aa7.55□□□□□ -1.2
AVT3YKL146W TY3B-GQ99315 1547 aa7.55□□□□□ -1.2
AVT3YKL146W PDR12Q02785 1511 aa7.55□□□□□ -1.2
AVT3YKL146W IKI3Q06706 1349 aaKnown RBP7.54□□□□□ -1.2
AVT3YKL146W LTE1P07866 1435 aa7.54□□□□□ -1.2
AVT3YKL146W CAT8P39113 1433 aa7.54□□□□□ -1.2
AVT3YKL146W YBT1P32386 1661 aa7.54□□□□□ -1.2
AVT3YKL146W GDB1Q06625 1536 aa7.52□□□□□ -1.21
AVT3YKL146W NUP157P40064 1391 aaKnown RBP7.52□□□□□ -1.21
AVT3YKL146W PDR10P51533 1564 aa7.5□□□□□ -1.21
AVT3YKL146W NUP170P38181 1502 aa7.48□□□□□ -1.21
AVT3YKL146W CKB1P43639 278 aa7.47□□□□□ -1.21
AVT3YKL146W DIP2Q12220 943 aaPredicted RBP7.46□□□□□ -1.22
AVT3YKL146W ARO1P08566 1588 aaKnown RBP7.46□□□□□ -1.22
AVT3YKL146W IQG1Q12280 1495 aa7.45□□□□□ -1.22
AVT3YKL146W SSM4P40318 1319 aa7.44□□□□□ -1.22
AVT3YKL146W DRS2P39524 1355 aa7.44□□□□□ -1.22
AVT3YKL146W BUD3P25558 1636 aa7.43□□□□□ -1.22
AVT3YKL146W SRB8P25648 1427 aa7.42□□□□□ -1.22
AVT3YKL146W ITT1Q04638 464 aa7.4□□□□□ -1.22
AVT3YKL146W BNI1P41832 1953 aa7.4□□□□□ -1.22
AVT3YKL146W SEC7P11075 2009 aaKnown RBP7.39□□□□□ -1.23
AVT3YKL146W YSP2Q06681 1438 aa7.38□□□□□ -1.23
AVT3YKL146W DOP1Q03921 1698 aa7.38□□□□□ -1.23
AVT3YKL146W BUD21Q08492 214 aaPredicted RBP7.36□□□□□ -1.23
AVT3YKL146W TRM3Q07527 1436 aa7.36□□□□□ -1.23
AVT3YKL146W MMS1Q06211 1407 aa7.35□□□□□ -1.23
AVT3YKL146W BNR1P40450 1375 aa7.34□□□□□ -1.23
AVT3YKL146W CHC1P22137 1653 aaKnown RBP7.32□□□□□ -1.24
AVT3YKL146W GCN2P15442 1659 aa7.28□□□□□ -1.24
AVT3YKL146W DNF2Q12675 1612 aa7.24□□□□□ -1.25
AVT3YKL146W DMA1P38823 416 aa7.21□□□□□ -1.26
AVT3YKL146W YOR093CQ12275 1648 aa7.2□□□□□ -1.26
AVT3YKL146W URN1Q06525 465 aaKnown RBP7.2□□□□□ -1.26
AVT3YKL146W PAF1P38351 445 aa7.19□□□□□ -1.26
AVT3YKL146W NUP188P52593 1655 aaKnown RBP7.19□□□□□ -1.26
AVT3YKL146W ABP1P15891 592 aaKnown RBP7.18□□□□□ -1.26
AVT3YKL146W NOP7P53261 605 aaKnown RBP7.18□□□□□ -1.26
AVT3YKL146W PDR5P33302 1511 aaKnown RBP7.17□□□□□ -1.26
AVT3YKL146W VMR1P38735 1592 aa7.16□□□□□ -1.26
AVT3YKL146W YAP3P38749 330 aa7.16□□□□□ -1.26
AVT3YKL146W IML1P47170 1584 aa7.14□□□□□ -1.27
AVT3YKL146W IPL1P38991 367 aa7.13□□□□□ -1.27
AVT3YKL146W LEO1P38439 464 aa7.12□□□□□ -1.27
AVT3YKL146W PDR11P40550 1411 aa7.11□□□□□ -1.27
AVT3YKL146W TYS1P36421 394 aaKnown RBP7.11□□□□□ -1.27
AVT3YKL146W RAV1P47104 1357 aa7.1□□□□□ -1.27
AVT3YKL146W DNF3Q12674 1656 aa7.09□□□□□ -1.27
AVT3YKL146W RTC1Q08281 1341 aa7.08□□□□□ -1.28
AVT3YKL146W POL5P39985 1022 aaKnown RBP7.04□□□□□ -1.28
AVT3YKL146W HAP1P0CE41 1502 aa7.03□□□□□ -1.28
AVT3YKL146W TAF5P38129 798 aa7.02□□□□□ -1.29
AVT3YKL146W MAK10Q02197 733 aa7.02□□□□□ -1.29
AVT3YKL146W ESL2P36168 1195 aa7.01□□□□□ -1.29
AVT3YKL146W NUP192P47054 1683 aa7.01□□□□□ -1.29
AVT3YKL146W MIF2P35201 549 aa6.99□□□□□ -1.29
AVT3YKL146W ORC1P54784 914 aaPredicted RBP6.99□□□□□ -1.29
AVT3YKL146W ALD4P46367 519 aaKnown RBP6.97□□□□□ -1.29
AVT3YKL146W RAD9P14737 1309 aa6.97□□□□□ -1.29
AVT3YKL146W BCK1Q01389 1478 aa6.96□□□□□ -1.29
AVT3YKL146W MRX12P47084 519 aa6.96□□□□□ -1.29
AVT3YKL146W KIP3P53086 805 aaKnown RBP6.96□□□□□ -1.3
AVT3YKL146W CAB1Q04430 367 aa6.96□□□□□ -1.3
AVT3YKL146W TY3B-IQ7LHG5 1498 aaKnown RBP6.95□□□□□ -1.3
AVT3YKL146W USO1P25386 1790 aa6.95□□□□□ -1.3
AVT3YKL146W NAP1P25293 417 aaKnown RBP6.94□□□□□ -1.3
AVT3YKL146W KRE5P22023 1365 aa6.93□□□□□ -1.3
AVT3YKL146W RIA1P53893 1110 aa6.93□□□□□ -1.3
AVT3YKL146W TAF8Q03750 510 aa6.93□□□□□ -1.3
AVT3YKL146W TY1B-NL2Q99337 1749 aaKnown RBP6.92□□□□□ -1.3
AVT3YKL146W SPE2P21182 396 aa6.91□□□□□ -1.3
AVT3YKL146W SCT1P32784 759 aa6.91□□□□□ -1.3
AVT3YKL146W YLR419WQ06698 1435 aaKnown RBP6.9□□□□□ -1.3
AVT3YKL146W CFT1Q06632 1357 aaKnown RBP6.89□□□□□ -1.31
AVT3YKL146W MHP1P43638 1398 aa6.88□□□□□ -1.31
AVT3YKL146W YMR196WQ04336 1088 aa6.88□□□□□ -1.31
AVT3YKL146W YNR029CP53729 429 aaKnown RBP6.86□□□□□ -1.31
AVT3YKL146W CHZ1P40019 153 aaPredicted RBP6.85□□□□□ -1.31
AVT3YKL146W SEC3P33332 1336 aaKnown RBP6.84□□□□□ -1.31
AVT3YKL146W MLP1Q02455 1875 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms