RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W IFH1P39520 1085 aa3.53□□□□□ -1.84
NUP100YKL068W UFD4P33202 1483 aa3.53□□□□□ -1.84
NUP100YKL068W ENV9Q08651 330 aa3.53□□□□□ -1.84
NUP100YKL068W RLF2Q12495 606 aa3.53□□□□□ -1.84
NUP100YKL068W YMR074CQ04773 145 aa3.53□□□□□ -1.85
NUP100YKL068W SPO14P36126 1683 aa3.52□□□□□ -1.85
NUP100YKL068W IOC4Q04213 475 aa3.52□□□□□ -1.85
NUP100YKL068W YLR271WQ06152 274 aa3.52□□□□□ -1.85
NUP100YKL068W RPN1P38764 993 aaKnown RBP3.51□□□□□ -1.85
NUP100YKL068W YIL055CP40523 627 aaKnown RBP3.51□□□□□ -1.85
NUP100YKL068W CHC1P22137 1653 aaKnown RBP3.49□□□□□ -1.85
NUP100YKL068W NAP1P25293 417 aaKnown RBP3.49□□□□□ -1.85
NUP100YKL068W AIM44Q99299 758 aa3.49□□□□□ -1.85
NUP100YKL068W NUP159P40477 1460 aa3.49□□□□□ -1.85
NUP100YKL068W MAC1P35192 417 aa3.49□□□□□ -1.85
NUP100YKL068W SIS1P25294 352 aaKnown RBP3.48□□□□□ -1.85
NUP100YKL068W HAP1P0CE41 1502 aa3.47□□□□□ -1.85
NUP100YKL068W GDB1Q06625 1536 aa3.47□□□□□ -1.85
NUP100YKL068W YGL015CP33199 130 aa3.46□□□□□ -1.85
NUP100YKL068W TY1B-NL2Q99337 1749 aaKnown RBP3.46□□□□□ -1.86
NUP100YKL068W PDR10P51533 1564 aa3.45□□□□□ -1.86
NUP100YKL068W XRN1P22147 1528 aaKnown RBP3.45□□□□□ -1.86
NUP100YKL068W BNR1P40450 1375 aa3.45□□□□□ -1.86
NUP100YKL068W TOP2P06786 1428 aaKnown RBP3.44□□□□□ -1.86
NUP100YKL068W ARO1P08566 1588 aaKnown RBP3.44□□□□□ -1.86
NUP100YKL068W SKI3P17883 1432 aaKnown RBP3.44□□□□□ -1.86
NUP100YKL068W GTT3P39996 337 aa3.43□□□□□ -1.86
NUP100YKL068W MGA2P40578 1113 aa3.43□□□□□ -1.86
NUP100YKL068W ORC1P54784 914 aaPredicted RBP3.43□□□□□ -1.86
NUP100YKL068W YMR196WQ04336 1088 aa3.43□□□□□ -1.86
NUP100YKL068W EDE1P34216 1381 aa3.43□□□□□ -1.86
NUP100YKL068W TFC8Q12308 588 aa3.42□□□□□ -1.86
NUP100YKL068W CKB1P43639 278 aa3.42□□□□□ -1.86
NUP100YKL068W DUS1P53759 423 aaKnown RBP3.42□□□□□ -1.86
NUP100YKL068W PSD2P53037 1138 aaKnown RBP3.41□□□□□ -1.86
NUP100YKL068W SPB4P25808 606 aaPredicted RBP3.41□□□□□ -1.86
NUP100YKL068W CST9Q06032 482 aa3.41□□□□□ -1.86
NUP100YKL068W MYO4P32492 1471 aa3.41□□□□□ -1.86
NUP100YKL068W RSM7P47150 247 aa3.41□□□□□ -1.86
NUP100YKL068W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
NUP100YKL068W YOR1P53049 1477 aa3.4□□□□□ -1.87
NUP100YKL068W YML020WQ03722 664 aa3.4□□□□□ -1.87
NUP100YKL068W TY1B-HO13535 1793 aa3.39□□□□□ -1.87
NUP100YKL068W TY1B-DR5P0C2I2 1755 aa3.39□□□□□ -1.87
NUP100YKL068W TY1B-DR6P0C2I3 1755 aa3.39□□□□□ -1.87
NUP100YKL068W TY1B-LR2P0C2I5 1755 aa3.39□□□□□ -1.87
NUP100YKL068W TY1B-LR3P0C2I6 1755 aaKnown RBP3.39□□□□□ -1.87
NUP100YKL068W TY1B-PR1P0C2I9 1755 aaKnown RBP3.39□□□□□ -1.87
NUP100YKL068W TY1B-PR2P0C2J0 1756 aa3.39□□□□□ -1.87
NUP100YKL068W TY1B-PR3P0C2J1 1755 aaKnown RBP3.39□□□□□ -1.87
NUP100YKL068W TY1B-JR1P47098 1755 aa3.39□□□□□ -1.87
NUP100YKL068W BCK1Q01389 1478 aa3.39□□□□□ -1.87
NUP100YKL068W TY1B-ML2Q03434 1755 aaKnown RBP3.39□□□□□ -1.87
NUP100YKL068W TY1B-ER1Q03612 1755 aa3.39□□□□□ -1.87
NUP100YKL068W TY1B-ML1Q04711 1755 aaKnown RBP3.39□□□□□ -1.87
NUP100YKL068W ULS1Q08562 1619 aa3.39□□□□□ -1.87
NUP100YKL068W TY1B-GR2Q12269 1755 aa3.39□□□□□ -1.87
NUP100YKL068W TY1B-OLQ12273 1755 aa3.39□□□□□ -1.87
NUP100YKL068W TY1B-PLQ12414 1755 aaKnown RBP3.39□□□□□ -1.87
NUP100YKL068W USO1P25386 1790 aa3.39□□□□□ -1.87
NUP100YKL068W RPO21P04050 1733 aaKnown RBP3.39□□□□□ -1.87
NUP100YKL068W SDH2P21801 266 aa3.38□□□□□ -1.87
NUP100YKL068W MRPL32P25348 183 aa3.38□□□□□ -1.87
NUP100YKL068W SPP41P38904 1435 aa3.38□□□□□ -1.87
NUP100YKL068W TY2B-LR1P0C2J3 1770 aa3.38□□□□□ -1.87
NUP100YKL068W TY2B-FP0CX63 1770 aa3.38□□□□□ -1.87
NUP100YKL068W TY2B-GR2P0CX64 1770 aa3.38□□□□□ -1.87
NUP100YKL068W TY2B-CP25384 1770 aa3.38□□□□□ -1.87
NUP100YKL068W TY2B-DR2Q03494 1770 aa3.38□□□□□ -1.87
NUP100YKL068W TY1B-DR1Q03855 1755 aa3.38□□□□□ -1.87
NUP100YKL068W TY2B-DR3Q07791 1770 aaKnown RBP3.38□□□□□ -1.87
NUP100YKL068W TY2B-OR1Q12113 1770 aa3.38□□□□□ -1.87
NUP100YKL068W TY2B-DR1Q12472 1770 aa3.38□□□□□ -1.87
NUP100YKL068W TY2B-OR2Q12501 1770 aa3.38□□□□□ -1.87
NUP100YKL068W URN1Q06525 465 aaKnown RBP3.37□□□□□ -1.87
NUP100YKL068W IML1P47170 1584 aa3.36□□□□□ -1.87
NUP100YKL068W TY3B-GQ99315 1547 aa3.36□□□□□ -1.87
NUP100YKL068W HOP09932 586 aa3.36□□□□□ -1.87
NUP100YKL068W CDC27P38042 758 aa3.36□□□□□ -1.87
NUP100YKL068W BUD3P25558 1636 aa3.36□□□□□ -1.87
NUP100YKL068W SNT2P53127 1403 aa3.35□□□□□ -1.87
NUP100YKL068W YTA7P40340 1379 aa3.35□□□□□ -1.87
NUP100YKL068W MMS22Q06164 1454 aa3.35□□□□□ -1.87
NUP100YKL068W YRF1-2P40105 1681 aa3.35□□□□□ -1.87
NUP100YKL068W DCD1P06773 312 aa3.34□□□□□ -1.87
NUP100YKL068W MAK10Q02197 733 aa3.34□□□□□ -1.87
NUP100YKL068W POM152P39685 1337 aa3.34□□□□□ -1.87
NUP100YKL068W VPS70P47161 811 aa3.34□□□□□ -1.87
NUP100YKL068W AI2P03876 854 aa3.33□□□□□ -1.88
NUP100YKL068W KIN1P13185 1064 aa3.33□□□□□ -1.88
NUP100YKL068W RAM2P29703 316 aa3.33□□□□□ -1.88
NUP100YKL068W YPR148CQ06523 435 aa3.33□□□□□ -1.88
NUP100YKL068W BCH2P36122 765 aa3.33□□□□□ -1.88
NUP100YKL068W SLX8P40072 274 aa3.33□□□□□ -1.88
NUP100YKL068W PEX21P50091 288 aa3.33□□□□□ -1.88
NUP100YKL068W NOP8Q08287 484 aaPredicted RBP3.33□□□□□ -1.88
NUP100YKL068W STU1P38198 1513 aa3.32□□□□□ -1.88
NUP100YKL068W POL1P13382 1468 aa3.3□□□□□ -1.88
NUP100YKL068W PUS5Q06244 254 aa3.3□□□□□ -1.88
NUP100YKL068W UBP1P25037 809 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms