RNA–Protein interactions for RNA: YIR012W

SQT1, Transcript of Protein involved in 60S ribosomal subunit assembly or modification, yeastyeast

Gene SQT1, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQT1YIR012W TY1B-ORQ92393 1755 aa9.38□□□□□ -0.91
SQT1YIR012W PDR15Q04182 1529 aaKnown RBP9.38□□□□□ -0.91
SQT1YIR012W MLP2P40457 1679 aa9.38□□□□□ -0.91
SQT1YIR012W CDC25P04821 1589 aa9.35□□□□□ -0.91
SQT1YIR012W TSC11P40061 1430 aa9.35□□□□□ -0.91
SQT1YIR012W NUP170P38181 1502 aa9.35□□□□□ -0.91
SQT1YIR012W VTH1P40438 1549 aa9.35□□□□□ -0.91
SQT1YIR012W VTH2P40890 1549 aa9.35□□□□□ -0.91
SQT1YIR012W ULS1Q08562 1619 aa9.34□□□□□ -0.91
SQT1YIR012W GEA1P47102 1408 aaPredicted RBP9.32□□□□□ -0.92
SQT1YIR012W RQC2Q12532 1038 aaKnown RBP9.31□□□□□ -0.92
SQT1YIR012W PAN1P32521 1480 aa9.31□□□□□ -0.92
SQT1YIR012W SNT2P53127 1403 aa9.29□□□□□ -0.92
SQT1YIR012W IFH1P39520 1085 aa9.28□□□□□ -0.92
SQT1YIR012W SSM4P40318 1319 aa9.26□□□□□ -0.93
SQT1YIR012W TY3B-GQ99315 1547 aa9.25□□□□□ -0.93
SQT1YIR012W ESC1Q03661 1658 aaKnown RBP9.23□□□□□ -0.93
SQT1YIR012W TY1B-JR2P47100 1755 aaKnown RBP9.23□□□□□ -0.93
SQT1YIR012W TY1B-ER2Q03619 1755 aa9.23□□□□□ -0.93
SQT1YIR012W TY1B-MR1Q04214 1755 aa9.23□□□□□ -0.93
SQT1YIR012W TY1B-MR2Q04670 1755 aaKnown RBP9.23□□□□□ -0.93
SQT1YIR012W TY1B-LR1Q12088 1755 aaKnown RBP9.23□□□□□ -0.93
SQT1YIR012W TY1B-NL1Q12112 1755 aa9.23□□□□□ -0.93
SQT1YIR012W TY1B-GR1Q12141 1755 aa9.23□□□□□ -0.93
SQT1YIR012W TY1B-BLQ12490 1755 aa9.23□□□□□ -0.93
SQT1YIR012W DNF1P32660 1571 aa9.19□□□□□ -0.94
SQT1YIR012W NTE1Q04958 1679 aa9.17□□□□□ -0.94
SQT1YIR012W GEA2P39993 1459 aaKnown RBP9.17□□□□□ -0.94
SQT1YIR012W BUD31P25337 157 aaPredicted RBP9.17□□□□□ -0.94
SQT1YIR012W RPA190P10964 1664 aaKnown RBP9.16□□□□□ -0.94
SQT1YIR012W IRC20Q06554 1556 aa9.16□□□□□ -0.94
SQT1YIR012W RPO21P04050 1733 aaKnown RBP9.14□□□□□ -0.95
SQT1YIR012W VPS15P22219 1454 aa9.14□□□□□ -0.95
SQT1YIR012W YBT1P32386 1661 aa9.13□□□□□ -0.95
SQT1YIR012W CAT8P39113 1433 aa9.13□□□□□ -0.95
SQT1YIR012W RTT106P40161 455 aa9.11□□□□□ -0.95
SQT1YIR012W SPT21P35209 758 aa9.1□□□□□ -0.95
SQT1YIR012W NUP159P40477 1460 aa9.09□□□□□ -0.95
SQT1YIR012W CDC27P38042 758 aa9.07□□□□□ -0.96
SQT1YIR012W UBP10P53874 792 aaPredicted RBP9.07□□□□□ -0.96
SQT1YIR012W GDB1Q06625 1536 aa9.04□□□□□ -0.96
SQT1YIR012W PDR12Q02785 1511 aa9.03□□□□□ -0.96
SQT1YIR012W PDR10P51533 1564 aa9.03□□□□□ -0.96
SQT1YIR012W SRB8P25648 1427 aa9.02□□□□□ -0.97
SQT1YIR012W ARO1P08566 1588 aaKnown RBP9.02□□□□□ -0.97
SQT1YIR012W SPO14P36126 1683 aa8.98□□□□□ -0.97
SQT1YIR012W MET10P39692 1035 aa8.97□□□□□ -0.97
SQT1YIR012W NUP157P40064 1391 aaKnown RBP8.97□□□□□ -0.97
SQT1YIR012W MET5P47169 1442 aa8.97□□□□□ -0.97
SQT1YIR012W YRF1-1P0CX20 1796 aa8.96□□□□□ -0.98
SQT1YIR012W YRF1-5P0CX21 1796 aa8.96□□□□□ -0.98
SQT1YIR012W YRF1-8P0CX22 1796 aa8.96□□□□□ -0.98
SQT1YIR012W RIM101P33400 625 aa8.94□□□□□ -0.98
SQT1YIR012W CKB1P43639 278 aa8.93□□□□□ -0.98
SQT1YIR012W GCN2P15442 1659 aa8.91□□□□□ -0.98
SQT1YIR012W YSP2Q06681 1438 aa8.9□□□□□ -0.98
SQT1YIR012W MMS1Q06211 1407 aa8.89□□□□□ -0.99
SQT1YIR012W YKR023WP36119 530 aaKnown RBP8.89□□□□□ -0.99
SQT1YIR012W MAP2P38174 421 aaKnown RBP8.89□□□□□ -0.99
SQT1YIR012W BUD3P25558 1636 aa8.89□□□□□ -0.99
SQT1YIR012W IQG1Q12280 1495 aa8.89□□□□□ -0.99
SQT1YIR012W POL5P39985 1022 aaKnown RBP8.88□□□□□ -0.99
SQT1YIR012W BUD21Q08492 214 aaPredicted RBP8.86□□□□□ -0.99
SQT1YIR012W NSR1P27476 414 aaKnown RBP RIP-Chip data8.82□□□□□ -1not detected
SQT1YIR012W PDR5P33302 1511 aaKnown RBP8.81□□□□□ -1
SQT1YIR012W NOP7P53261 605 aaKnown RBP8.78□□□□□ -1
SQT1YIR012W YOR093CQ12275 1648 aa8.78□□□□□ -1
SQT1YIR012W BNR1P40450 1375 aa8.77□□□□□ -1.01
SQT1YIR012W LTE1P07866 1435 aa8.73□□□□□ -1.01
SQT1YIR012W CHC1P22137 1653 aaKnown RBP8.73□□□□□ -1.01
SQT1YIR012W TFC8Q12308 588 aa8.73□□□□□ -1.01
SQT1YIR012W SEC3P33332 1336 aaKnown RBP8.73□□□□□ -1.01
SQT1YIR012W SEC7P11075 2009 aaKnown RBP8.72□□□□□ -1.01
SQT1YIR012W PAF1P38351 445 aa8.72□□□□□ -1.01
SQT1YIR012W TRM3Q07527 1436 aa8.71□□□□□ -1.01
SQT1YIR012W ENP1P38333 483 aaKnown RBP8.71□□□□□ -1.02
SQT1YIR012W SPT7P35177 1332 aa8.7□□□□□ -1.02
SQT1YIR012W TIF4632P39936 914 aaKnown RBP8.68□□□□□ -1.02
SQT1YIR012W DOP1Q03921 1698 aa8.68□□□□□ -1.02
SQT1YIR012W VMR1P38735 1592 aa8.67□□□□□ -1.02
SQT1YIR012W TGL3P40308 642 aa8.67□□□□□ -1.02
SQT1YIR012W RAV1P47104 1357 aa8.67□□□□□ -1.02
SQT1YIR012W PDR11P40550 1411 aa8.66□□□□□ -1.02
SQT1YIR012W HOP09932 586 aa8.66□□□□□ -1.02
SQT1YIR012W TY3B-IQ7LHG5 1498 aaKnown RBP8.65□□□□□ -1.02
SQT1YIR012W MHP1P43638 1398 aa8.65□□□□□ -1.02
SQT1YIR012W UBP9P39967 754 aa8.65□□□□□ -1.02
SQT1YIR012W DRS2P39524 1355 aa8.64□□□□□ -1.03
SQT1YIR012W RTC1Q08281 1341 aa8.64□□□□□ -1.03
SQT1YIR012W NUP188P52593 1655 aaKnown RBP8.63□□□□□ -1.03
SQT1YIR012W IML1P47170 1584 aa8.63□□□□□ -1.03
SQT1YIR012W OXP1P28273 1286 aa8.61□□□□□ -1.03
SQT1YIR012W SIS1P25294 352 aaKnown RBP8.6□□□□□ -1.03
SQT1YIR012W NOP2P40991 618 aaKnown RBP8.6□□□□□ -1.03
SQT1YIR012W ORC1P54784 914 aaPredicted RBP8.58□□□□□ -1.04
SQT1YIR012W DCD1P06773 312 aa8.57□□□□□ -1.04
SQT1YIR012W SLX5P32828 619 aaKnown RBP8.57□□□□□ -1.04
SQT1YIR012W DNF2Q12675 1612 aa8.57□□□□□ -1.04
SQT1YIR012W YLR419WQ06698 1435 aaKnown RBP8.56□□□□□ -1.04
SQT1YIR012W TAF5P38129 798 aa8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms