RNA–Protein interactions for RNA: YIL016W

SNL1, Transcript of Ribosome-associated protein, yeast

Gene SNL1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNL1	YIL016W	TFB3	Q03290	321 aa		7.52	□□□□□ -1.21
SNL1	YIL016W	HPC2	Q01448	625 aa		7.5	□□□□□ -1.21
SNL1	YIL016W	ATH1	P48016	1211 aa		7.49	□□□□□ -1.21
SNL1	YIL016W	VMA1	P17255	1071 aa	Known RBP	7.48	□□□□□ -1.21
SNL1	YIL016W	KIC1	P38692	1080 aa		7.47	□□□□□ -1.21
SNL1	YIL016W	YLR326W	Q06170	240 aa	Known RBP	7.47	□□□□□ -1.21
SNL1	YIL016W	PKC1	P24583	1151 aa		7.46	□□□□□ -1.22
SNL1	YIL016W	YAP5	P40574	245 aa		7.46	□□□□□ -1.22
SNL1	YIL016W	GRE2	Q12068	342 aa	Known RBP	7.46	□□□□□ -1.22
SNL1	YIL016W	GUT1	P32190	709 aa		7.45	□□□□□ -1.22
SNL1	YIL016W	BRL1	P38770	471 aa		7.45	□□□□□ -1.22
SNL1	YIL016W	TIF4632	P39936	914 aa	Known RBP	7.45	□□□□□ -1.22
SNL1	YIL016W	CSN12	P47130	423 aa		7.43	□□□□□ -1.22
SNL1	YIL016W	YGR273C	P53329	174 aa		7.42	□□□□□ -1.22
SNL1	YIL016W	RAD54	P32863	898 aa		7.41	□□□□□ -1.22
SNL1	YIL016W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	7.4	□□□□□ -1.22	RIP-Chip
SNL1	YIL016W	PSE1	P32337	1089 aa	Known RBP	7.4	□□□□□ -1.22
SNL1	YIL016W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	7.4	□□□□□ -1.22	not detected
SNL1	YIL016W	YJL007C	P47080	104 aa		7.4	□□□□□ -1.22
SNL1	YIL016W	KEX1	P09620	729 aa		7.39	□□□□□ -1.23
SNL1	YIL016W	SSA2	P10592	639 aa	Known RBP	7.39	□□□□□ -1.23
SNL1	YIL016W	BIM1	P40013	344 aa		7.38	□□□□□ -1.23
SNL1	YIL016W	TGL3	P40308	642 aa		7.38	□□□□□ -1.23
SNL1	YIL016W	SOL3	P38858	249 aa		7.37	□□□□□ -1.23
SNL1	YIL016W	GYP5	Q12344	894 aa		7.37	□□□□□ -1.23
SNL1	YIL016W	TEA1	P47988	759 aa		7.35	□□□□□ -1.23
SNL1	YIL016W	TYW1	Q08960	810 aa	Known RBP	7.35	□□□□□ -1.23
SNL1	YIL016W	SAM3	Q08986	587 aa		7.34	□□□□□ -1.23
SNL1	YIL016W	GLN1	P32288	370 aa	Known RBP	7.33	□□□□□ -1.24
SNL1	YIL016W	DCW1	P36091	449 aa		7.33	□□□□□ -1.24
SNL1	YIL016W	ATG32	P40458	529 aa		7.33	□□□□□ -1.24
SNL1	YIL016W	KTR1	P27810	393 aa	Known RBP	7.32	□□□□□ -1.24
SNL1	YIL016W	SUB2	Q07478	446 aa	Known RBP	7.32	□□□□□ -1.24
SNL1	YIL016W	ORC6	P38826	435 aa		7.3	□□□□□ -1.24
SNL1	YIL016W	SSA1	P10591	642 aa	Known RBP	7.29	□□□□□ -1.24
SNL1	YIL016W	YML020W	Q03722	664 aa		7.29	□□□□□ -1.24
SNL1	YIL016W	RGR1	P19263	1082 aa		7.28	□□□□□ -1.24
SNL1	YIL016W	GTT3	P39996	337 aa		7.28	□□□□□ -1.24
SNL1	YIL016W	RPL34B	P40525	121 aa	Known RBP	7.28	□□□□□ -1.24
SNL1	YIL016W	GEF1	P37020	779 aa		7.27	□□□□□ -1.25
SNL1	YIL016W	SLX8	P40072	274 aa		7.27	□□□□□ -1.25
SNL1	YIL016W	ERG12	P07277	443 aa		7.26	□□□□□ -1.25
SNL1	YIL016W	TIF1	P10081	395 aa	Known RBP	7.26	□□□□□ -1.25
SNL1	YIL016W	YBL036C	P38197	257 aa		7.26	□□□□□ -1.25
SNL1	YIL016W	MVP1	P40959	511 aa	Known RBP	7.25	□□□□□ -1.25
SNL1	YIL016W	NST1	P53935	1240 aa		7.25	□□□□□ -1.25
SNL1	YIL016W	SET4	P42948	560 aa		7.24	□□□□□ -1.25
SNL1	YIL016W	SSA4	P22202	642 aa	Known RBP	7.23	□□□□□ -1.25
SNL1	YIL016W	NIS1	P53939	407 aa		7.23	□□□□□ -1.25
SNL1	YIL016W	YOL036W	Q08206	761 aa		7.23	□□□□□ -1.25
SNL1	YIL016W	MPH3	P0CE00	602 aa		7.22	□□□□□ -1.25
SNL1	YIL016W	SCJ1	P25303	377 aa		7.22	□□□□□ -1.25
SNL1	YIL016W	FPK1	P53739	893 aa		7.22	□□□□□ -1.25
SNL1	YIL016W	YPR109W	Q06104	294 aa		7.22	□□□□□ -1.25
SNL1	YIL016W	YPR204W	Q08995	1032 aa		7.22	□□□□□ -1.25
SNL1	YIL016W	HTA1	P04911	132 aa	Known RBP	7.21	□□□□□ -1.26
SNL1	YIL016W	HTA2	P04912	132 aa		7.21	□□□□□ -1.26
SNL1	YIL016W	CPS1	P27614	576 aa		7.21	□□□□□ -1.26
SNL1	YIL016W	ILV3	P39522	585 aa	Known RBP	7.21	□□□□□ -1.26
SNL1	YIL016W	PKH3	Q03306	898 aa	Predicted RBP	7.21	□□□□□ -1.26
SNL1	YIL016W	YMR196W	Q04336	1088 aa		7.21	□□□□□ -1.26
SNL1	YIL016W	MMP1	Q12372	583 aa		7.21	□□□□□ -1.26
SNL1	YIL016W	MST1	P07236	462 aa		7.2	□□□□□ -1.26
SNL1	YIL016W	ESS1	P22696	170 aa		7.2	□□□□□ -1.26
SNL1	YIL016W	CLB5	P30283	435 aa		7.2	□□□□□ -1.26
SNL1	YIL016W	RTG2	P32608	588 aa	Known RBP	7.2	□□□□□ -1.26
SNL1	YIL016W	YNL108C	P53929	270 aa		7.2	□□□□□ -1.26
SNL1	YIL016W	AI4	P03878	556 aa		7.19	□□□□□ -1.26
SNL1	YIL016W	BIO2	P32451	375 aa		7.19	□□□□□ -1.26
SNL1	YIL016W	SLI15	P38283	698 aa		7.18	□□□□□ -1.26
SNL1	YIL016W	HST2	P53686	357 aa		7.18	□□□□□ -1.26
SNL1	YIL016W	RAD59	Q12223	238 aa		7.18	□□□□□ -1.26
SNL1	YIL016W	YJU3	P28321	313 aa		7.17	□□□□□ -1.26
SNL1	YIL016W	CSC1	Q06538	782 aa		7.17	□□□□□ -1.26
SNL1	YIL016W	NOP8	Q08287	484 aa	Predicted RBP	7.17	□□□□□ -1.26
SNL1	YIL016W	TTI1	P36097	1038 aa		7.16	□□□□□ -1.26
SNL1	YIL016W	DAN4	P47179	1161 aa		7.16	□□□□□ -1.26
SNL1	YIL016W	CDC73	Q06697	393 aa		7.16	□□□□□ -1.26
SNL1	YIL016W	RPP1B	P10622	106 aa	Known RBP	7.15	□□□□□ -1.26
SNL1	YIL016W	GAP1	P19145	602 aa	Predicted RBP	7.15	□□□□□ -1.26
SNL1	YIL016W	ARG8	P18544	423 aa		7.14	□□□□□ -1.27
SNL1	YIL016W	CSE4	P36012	229 aa		7.14	□□□□□ -1.27
SNL1	YIL016W	YEL023C	P39992	682 aa		7.13	□□□□□ -1.27
SNL1	YIL016W	PEX21	P50091	288 aa		7.13	□□□□□ -1.27
SNL1	YIL016W	RPL34A	P87262	121 aa	Predicted RBP	7.13	□□□□□ -1.27
SNL1	YIL016W	NOB1	Q08444	459 aa	Known RBP	7.12	□□□□□ -1.27
SNL1	YIL016W	TUM1	Q08686	304 aa	Known RBP	7.11	□□□□□ -1.27
SNL1	YIL016W	WSC3	Q12215	556 aa		7.11	□□□□□ -1.27
SNL1	YIL016W	SUP45	P12385	437 aa	Known RBP	7.1	□□□□□ -1.27
SNL1	YIL016W	YDJ1	P25491	409 aa	Known RBP	7.1	□□□□□ -1.27
SNL1	YIL016W	TFB4	Q12004	338 aa		7.1	□□□□□ -1.27
SNL1	YIL016W	SIT4	P20604	311 aa		7.09	□□□□□ -1.27
SNL1	YIL016W	SLY41	P22215	453 aa		7.08	□□□□□ -1.28
SNL1	YIL016W	MSB4	Q12317	492 aa		7.08	□□□□□ -1.28
SNL1	YIL016W	ENO2	P00925	437 aa	Known RBP	7.07	□□□□□ -1.28
SNL1	YIL016W	PTC4	P38089	393 aa		7.07	□□□□□ -1.28
SNL1	YIL016W	ENO1	P00924	437 aa	Known RBP	7.06	□□□□□ -1.28
SNL1	YIL016W	YML083C	Q04526	418 aa		7.06	□□□□□ -1.28
SNL1	YIL016W	CDC3	P32457	520 aa	Known RBP	7.05	□□□□□ -1.28
SNL1	YIL016W	SLD2	P34252	453 aa		7.05	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms