RNA–Protein interactions for RNA: YHR135C

YCK1, Transcript of Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform, yeast

Gene YCK1, Length 1,617 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCK1	YHR135C	TY1B-GR3	Q12316	1755 aa		9.43	□□□□□ -0.9
YCK1	YHR135C	TY1B-OR	Q92393	1755 aa		9.43	□□□□□ -0.9
YCK1	YHR135C	TY1B-H	O13535	1793 aa		9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-DR5	P0C2I2	1755 aa		9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-DR6	P0C2I3	1755 aa		9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-LR2	P0C2I5	1755 aa		9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-PR2	P0C2J0	1756 aa		9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-JR1	P47098	1755 aa		9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-ML2	Q03434	1755 aa	Known RBP	9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-ER1	Q03612	1755 aa		9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-ML1	Q04711	1755 aa	Known RBP	9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-GR2	Q12269	1755 aa		9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-OL	Q12273	1755 aa		9.42	□□□□□ -0.9
YCK1	YHR135C	TY1B-PL	Q12414	1755 aa	Known RBP	9.42	□□□□□ -0.9
YCK1	YHR135C	YTA7	P40340	1379 aa		9.41	□□□□□ -0.9
YCK1	YHR135C	SMC4	Q12267	1418 aa		9.41	□□□□□ -0.9
YCK1	YHR135C	MYO4	P32492	1471 aa		9.39	□□□□□ -0.91
YCK1	YHR135C	CDC25	P04821	1589 aa		9.34	□□□□□ -0.91
YCK1	YHR135C	MLP2	P40457	1679 aa		9.31	□□□□□ -0.92
YCK1	YHR135C	BUD31	P25337	157 aa	Predicted RBP	9.31	□□□□□ -0.92
YCK1	YHR135C	SAS10	Q12136	610 aa	Predicted RBP	9.31	□□□□□ -0.92
YCK1	YHR135C	ESC1	Q03661	1658 aa	Known RBP	9.3	□□□□□ -0.92
YCK1	YHR135C	PSD2	P53037	1138 aa	Known RBP	9.3	□□□□□ -0.92
YCK1	YHR135C	SNQ2	P32568	1501 aa	Known RBP	9.28	□□□□□ -0.92
YCK1	YHR135C	RQC2	Q12532	1038 aa	Known RBP	9.27	□□□□□ -0.92
YCK1	YHR135C	SPP41	P38904	1435 aa		9.27	□□□□□ -0.93
YCK1	YHR135C	TY1B-JR2	P47100	1755 aa	Known RBP	9.26	□□□□□ -0.93
YCK1	YHR135C	TY1B-ER2	Q03619	1755 aa		9.26	□□□□□ -0.93
YCK1	YHR135C	TY1B-MR1	Q04214	1755 aa		9.26	□□□□□ -0.93
YCK1	YHR135C	TY1B-MR2	Q04670	1755 aa	Known RBP	9.26	□□□□□ -0.93
YCK1	YHR135C	TY1B-LR1	Q12088	1755 aa	Known RBP	9.26	□□□□□ -0.93
YCK1	YHR135C	TY1B-NL1	Q12112	1755 aa		9.26	□□□□□ -0.93
YCK1	YHR135C	TY1B-GR1	Q12141	1755 aa		9.26	□□□□□ -0.93
YCK1	YHR135C	TY1B-BL	Q12490	1755 aa		9.26	□□□□□ -0.93
YCK1	YHR135C	UBP9	P39967	754 aa		9.24	□□□□□ -0.93
YCK1	YHR135C	MGA2	P40578	1113 aa		9.23	□□□□□ -0.93
YCK1	YHR135C	PAN1	P32521	1480 aa		9.23	□□□□□ -0.93
YCK1	YHR135C	VTH1	P40438	1549 aa		9.23	□□□□□ -0.93
YCK1	YHR135C	VTH2	P40890	1549 aa		9.23	□□□□□ -0.93
YCK1	YHR135C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	9.23	□□□□□ -0.93	not detected
YCK1	YHR135C	ULS1	Q08562	1619 aa		9.22	□□□□□ -0.93
YCK1	YHR135C	PDR15	Q04182	1529 aa	Known RBP	9.22	□□□□□ -0.93
YCK1	YHR135C	RPA190	P10964	1664 aa	Known RBP	9.21	□□□□□ -0.94
YCK1	YHR135C	YOR238W	Q08634	303 aa		9.2	□□□□□ -0.94
YCK1	YHR135C	STH1	P32597	1359 aa		9.2	□□□□□ -0.94
YCK1	YHR135C	DNF1	P32660	1571 aa		9.19	□□□□□ -0.94
YCK1	YHR135C	TSC11	P40061	1430 aa		9.18	□□□□□ -0.94
YCK1	YHR135C	YAP5	P40574	245 aa		9.18	□□□□□ -0.94
YCK1	YHR135C	NTE1	Q04958	1679 aa		9.17	□□□□□ -0.94
YCK1	YHR135C	MST1	P07236	462 aa		9.16	□□□□□ -0.94
YCK1	YHR135C	MRM1	P25270	412 aa		9.16	□□□□□ -0.94
YCK1	YHR135C	TRM732	Q03496	1420 aa		9.14	□□□□□ -0.95
YCK1	YHR135C	RPO21	P04050	1733 aa	Known RBP	9.14	□□□□□ -0.95
YCK1	YHR135C	CST9	Q06032	482 aa		9.11	□□□□□ -0.95
YCK1	YHR135C	TAF7	Q05021	590 aa		9.09	□□□□□ -0.95
YCK1	YHR135C	SNT2	P53127	1403 aa		9.08	□□□□□ -0.96
YCK1	YHR135C	IFH1	P39520	1085 aa		9.08	□□□□□ -0.96
YCK1	YHR135C	GEA1	P47102	1408 aa	Predicted RBP	9.08	□□□□□ -0.96
YCK1	YHR135C	TY3B-G	Q99315	1547 aa		9.07	□□□□□ -0.96
YCK1	YHR135C	YBT1	P32386	1661 aa		9.05	□□□□□ -0.96
YCK1	YHR135C	RTG3	P38165	486 aa		9.05	□□□□□ -0.96
YCK1	YHR135C	YRF1-1	P0CX20	1796 aa		9.03	□□□□□ -0.96
YCK1	YHR135C	YRF1-5	P0CX21	1796 aa		9.03	□□□□□ -0.96
YCK1	YHR135C	YRF1-8	P0CX22	1796 aa		9.03	□□□□□ -0.96
YCK1	YHR135C	IRC20	Q06554	1556 aa		9.03	□□□□□ -0.96
YCK1	YHR135C	NUP170	P38181	1502 aa		9.02	□□□□□ -0.97
YCK1	YHR135C	NUP159	P40477	1460 aa		9.01	□□□□□ -0.97
YCK1	YHR135C	GEA2	P39993	1459 aa	Known RBP	9	□□□□□ -0.97
YCK1	YHR135C	IKI3	Q06706	1349 aa	Known RBP	8.99	□□□□□ -0.97
YCK1	YHR135C	GTT3	P39996	337 aa		8.98	□□□□□ -0.97
YCK1	YHR135C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	8.97	□□□□□ -0.97	not detected
YCK1	YHR135C	SPO14	P36126	1683 aa		8.96	□□□□□ -0.98
YCK1	YHR135C	SSM4	P40318	1319 aa		8.94	□□□□□ -0.98
YCK1	YHR135C	VPS15	P22219	1454 aa		8.94	□□□□□ -0.98
YCK1	YHR135C	VPS29	P38759	282 aa		8.94	□□□□□ -0.98
YCK1	YHR135C	RTT106	P40161	455 aa		8.94	□□□□□ -0.98
YCK1	YHR135C	YBL029C-A	Q3E756	94 aa		8.93	□□□□□ -0.98
YCK1	YHR135C	MET5	P47169	1442 aa		8.92	□□□□□ -0.98
YCK1	YHR135C	SIS1	P25294	352 aa	Known RBP	8.91	□□□□□ -0.98
YCK1	YHR135C	GDB1	Q06625	1536 aa		8.9	□□□□□ -0.98
YCK1	YHR135C	PIB1	Q06651	286 aa		8.9	□□□□□ -0.99
YCK1	YHR135C	DBP1	P24784	617 aa	Known RBP	8.89	□□□□□ -0.99
YCK1	YHR135C	PDR12	Q02785	1511 aa		8.89	□□□□□ -0.99
YCK1	YHR135C	ARO1	P08566	1588 aa	Known RBP	8.89	□□□□□ -0.99
YCK1	YHR135C	PDR10	P51533	1564 aa		8.89	□□□□□ -0.99
YCK1	YHR135C	VNX1	P42839	908 aa		8.88	□□□□□ -0.99
YCK1	YHR135C	WSC3	Q12215	556 aa		8.88	□□□□□ -0.99
YCK1	YHR135C	CAT8	P39113	1433 aa		8.88	□□□□□ -0.99
YCK1	YHR135C	BUD3	P25558	1636 aa		8.85	□□□□□ -0.99
YCK1	YHR135C	RCR1	P38212	213 aa		8.84	□□□□□ -0.99
YCK1	YHR135C	SPP1	Q03012	353 aa		8.84	□□□□□ -0.99
YCK1	YHR135C	NUP157	P40064	1391 aa	Known RBP	8.83	□□□□□ -1
YCK1	YHR135C	MET10	P39692	1035 aa		8.82	□□□□□ -1
YCK1	YHR135C	YFR006W	P43590	535 aa		8.82	□□□□□ -1
YCK1	YHR135C	STS1	P38637	319 aa		8.8	□□□□□ -1
YCK1	YHR135C	MSB4	Q12317	492 aa		8.8	□□□□□ -1
YCK1	YHR135C	TIF11	P38912	153 aa	Known RBP	8.79	□□□□□ -1

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms