RNA–Protein interactions for RNA: YGL166W

CUP2, Transcript of Copper-binding transcription factor, yeastyeast

Gene CUP2, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP2YGL166W YRF1-5P0CX21 1796 aa10.24□□□□□ -0.77
CUP2YGL166W YRF1-8P0CX22 1796 aa10.24□□□□□ -0.77
CUP2YGL166W NTE1Q04958 1679 aa10.23□□□□□ -0.77
CUP2YGL166W VPS15P22219 1454 aa10.23□□□□□ -0.77
CUP2YGL166W MYO4P32492 1471 aa10.23□□□□□ -0.77
CUP2YGL166W BNI1P41832 1953 aa10.22□□□□□ -0.77
CUP2YGL166W RPO21P04050 1733 aaKnown RBP10.19□□□□□ -0.78
CUP2YGL166W DRS2P39524 1355 aa10.17□□□□□ -0.78
CUP2YGL166W STH1P32597 1359 aa10.16□□□□□ -0.78
CUP2YGL166W SNQ2P32568 1501 aaKnown RBP10.16□□□□□ -0.78
CUP2YGL166W MMS1Q06211 1407 aa10.16□□□□□ -0.78
CUP2YGL166W MIF2P35201 549 aa10.15□□□□□ -0.78
CUP2YGL166W RTT106P40161 455 aa10.15□□□□□ -0.78
CUP2YGL166W ABP1P15891 592 aaKnown RBP10.13□□□□□ -0.79
CUP2YGL166W MET10P39692 1035 aa10.12□□□□□ -0.79
CUP2YGL166W SAS10Q12136 610 aaPredicted RBP10.12□□□□□ -0.79
CUP2YGL166W SNT2P53127 1403 aa10.12□□□□□ -0.79
CUP2YGL166W NUP170P38181 1502 aa10.04□□□□□ -0.8
CUP2YGL166W SPO14P36126 1683 aa10.02□□□□□ -0.8
CUP2YGL166W ULS1Q08562 1619 aa10.01□□□□□ -0.81
CUP2YGL166W IFH1P39520 1085 aa10□□□□□ -0.81
CUP2YGL166W MLP2P40457 1679 aa9.99□□□□□ -0.81
CUP2YGL166W NUP157P40064 1391 aaKnown RBP9.99□□□□□ -0.81
CUP2YGL166W PDR15Q04182 1529 aaKnown RBP9.98□□□□□ -0.81
CUP2YGL166W PDR12Q02785 1511 aa9.97□□□□□ -0.81
CUP2YGL166W TAF7Q05021 590 aa9.97□□□□□ -0.81
CUP2YGL166W GDB1Q06625 1536 aa9.93□□□□□ -0.82
CUP2YGL166W IQG1Q12280 1495 aa9.93□□□□□ -0.82
CUP2YGL166W DNF2Q12675 1612 aa9.91□□□□□ -0.82
CUP2YGL166W IRC20Q06554 1556 aa9.9□□□□□ -0.82
CUP2YGL166W PDR10P51533 1564 aa9.89□□□□□ -0.83
CUP2YGL166W DOP1Q03921 1698 aa9.88□□□□□ -0.83
CUP2YGL166W TRM3Q07527 1436 aa9.86□□□□□ -0.83
CUP2YGL166W YFR006WP43590 535 aa9.84□□□□□ -0.83
CUP2YGL166W GEA1P47102 1408 aaPredicted RBP9.83□□□□□ -0.84
CUP2YGL166W BUD3P25558 1636 aa9.83□□□□□ -0.84
CUP2YGL166W CKB1P43639 278 aa9.81□□□□□ -0.84
CUP2YGL166W CAT8P39113 1433 aa9.79□□□□□ -0.84
CUP2YGL166W TY3B-GQ99315 1547 aa9.76□□□□□ -0.85
CUP2YGL166W ARO1P08566 1588 aaKnown RBP9.74□□□□□ -0.85
CUP2YGL166W YBT1P32386 1661 aa9.72□□□□□ -0.85
CUP2YGL166W CHC1P22137 1653 aaKnown RBP9.71□□□□□ -0.86
CUP2YGL166W BNR1P40450 1375 aa9.69□□□□□ -0.86
CUP2YGL166W YSP2Q06681 1438 aa9.69□□□□□ -0.86
CUP2YGL166W SEC7P11075 2009 aaKnown RBP9.68□□□□□ -0.86
CUP2YGL166W YOR093CQ12275 1648 aa9.67□□□□□ -0.86
CUP2YGL166W YAP3P38749 330 aa9.63□□□□□ -0.87
CUP2YGL166W SRB8P25648 1427 aa9.59□□□□□ -0.87
CUP2YGL166W DNF3Q12674 1656 aa9.58□□□□□ -0.88
CUP2YGL166W URN1Q06525 465 aaKnown RBP9.56□□□□□ -0.88
CUP2YGL166W BUD21Q08492 214 aaPredicted RBP9.56□□□□□ -0.88
CUP2YGL166W MAK10Q02197 733 aa9.53□□□□□ -0.88
CUP2YGL166W IPL1P38991 367 aa9.46□□□□□ -0.9
CUP2YGL166W TYS1P36421 394 aaKnown RBP9.44□□□□□ -0.9
CUP2YGL166W IKI3Q06706 1349 aaKnown RBP9.43□□□□□ -0.9
CUP2YGL166W NUP188P52593 1655 aaKnown RBP9.39□□□□□ -0.91
CUP2YGL166W SSM4P40318 1319 aa9.39□□□□□ -0.91
CUP2YGL166W USO1P25386 1790 aa9.36□□□□□ -0.91
CUP2YGL166W VMR1P38735 1592 aa9.36□□□□□ -0.91
CUP2YGL166W IML1P47170 1584 aa9.36□□□□□ -0.91
CUP2YGL166W PDR5P33302 1511 aaKnown RBP9.35□□□□□ -0.91
CUP2YGL166W THI12P42883 340 aa9.31□□□□□ -0.92
CUP2YGL166W THI5P43534 340 aa9.31□□□□□ -0.92
CUP2YGL166W THI11P47183 340 aa9.31□□□□□ -0.92
CUP2YGL166W YMR196WQ04336 1088 aa9.31□□□□□ -0.92
CUP2YGL166W THI13Q07748 340 aa9.31□□□□□ -0.92
CUP2YGL166W HAP1P0CE41 1502 aa9.27□□□□□ -0.93
CUP2YGL166W PDR11P40550 1411 aa9.26□□□□□ -0.93
CUP2YGL166W TY1B-NL2Q99337 1749 aaKnown RBP9.23□□□□□ -0.93
CUP2YGL166W GCN2P15442 1659 aa9.21□□□□□ -0.93
CUP2YGL166W MRX12P47084 519 aa9.21□□□□□ -0.94
CUP2YGL166W KRE5P22023 1365 aa9.21□□□□□ -0.94
CUP2YGL166W PAF1P38351 445 aa9.2□□□□□ -0.94
CUP2YGL166W RIA1P53893 1110 aa9.2□□□□□ -0.94
CUP2YGL166W RAV1P47104 1357 aa9.13□□□□□ -0.95
CUP2YGL166W CAB1Q04430 367 aa9.13□□□□□ -0.95
CUP2YGL166W YNR029CP53729 429 aaKnown RBP9.12□□□□□ -0.95
CUP2YGL166W BFR2Q06631 534 aaKnown RBP9.12□□□□□ -0.95
CUP2YGL166W CFT1Q06632 1357 aaKnown RBP9.12□□□□□ -0.95
CUP2YGL166W NOP7P53261 605 aaKnown RBP9.11□□□□□ -0.95
CUP2YGL166W BCK1Q01389 1478 aa9.09□□□□□ -0.95
CUP2YGL166W RAD9P14737 1309 aa9.09□□□□□ -0.95
CUP2YGL166W RTC1Q08281 1341 aa9.07□□□□□ -0.96
CUP2YGL166W ALD4P46367 519 aaKnown RBP9.07□□□□□ -0.96
CUP2YGL166W FAP1P53971 965 aa9.06□□□□□ -0.96
CUP2YGL166W APP1P53933 587 aa9.05□□□□□ -0.96
CUP2YGL166W YAH1Q12184 172 aaKnown RBP9.04□□□□□ -0.96
CUP2YGL166W PTP3P40048 928 aa9.03□□□□□ -0.96
CUP2YGL166W NUP192P47054 1683 aa9.01□□□□□ -0.97
CUP2YGL166W TAF5P38129 798 aa9□□□□□ -0.97
CUP2YGL166W TY3B-IQ7LHG5 1498 aaKnown RBP8.99□□□□□ -0.97
CUP2YGL166W NAP1P25293 417 aaKnown RBP8.98□□□□□ -0.97
CUP2YGL166W TAF8Q03750 510 aa8.98□□□□□ -0.97
CUP2YGL166W REB1P21538 810 aa8.95□□□□□ -0.98
CUP2YGL166W GLN1P32288 370 aaKnown RBP8.95□□□□□ -0.98
CUP2YGL166W ESL2P36168 1195 aa8.95□□□□□ -0.98
CUP2YGL166W YIL055CP40523 627 aaKnown RBP8.95□□□□□ -0.98
CUP2YGL166W ENT1Q12518 454 aa8.94□□□□□ -0.98
CUP2YGL166W RCM1P53972 490 aa8.93□□□□□ -0.98
CUP2YGL166W ENV9Q08651 330 aa8.9□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms