RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeast

Gene BRP1, Length 378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BRP1	YGL007W	VRP1	P37370	817 aa		4.92	□□□□□ -1.62
BRP1	YGL007W	SSP1	P38871	571 aa		4.92	□□□□□ -1.62
BRP1	YGL007W	XDJ1	P39102	459 aa		4.92	□□□□□ -1.62
BRP1	YGL007W	YEL023C	P39992	682 aa		4.92	□□□□□ -1.62
BRP1	YGL007W	TFA1	P36100	482 aa		4.91	□□□□□ -1.62
BRP1	YGL007W	RCR1	P38212	213 aa		4.88	□□□□□ -1.63
BRP1	YGL007W	MGA2	P40578	1113 aa		4.88	□□□□□ -1.63
BRP1	YGL007W	DPS1	P04802	557 aa	Known RBP	4.85	□□□□□ -1.63
BRP1	YGL007W	ELP4	Q02884	456 aa	Known RBP	4.85	□□□□□ -1.63
BRP1	YGL007W	YDR344C	Q05510	147 aa		4.85	□□□□□ -1.63
BRP1	YGL007W	PML39	Q03760	334 aa		4.84	□□□□□ -1.63
BRP1	YGL007W	RGA2	Q06407	1009 aa		4.8	□□□□□ -1.64
BRP1	YGL007W	ARH1	P48360	493 aa		4.78	□□□□□ -1.64
BRP1	YGL007W	GRE2	Q12068	342 aa	Known RBP	4.78	□□□□□ -1.64
BRP1	YGL007W	MID1	P41821	548 aa		4.74	□□□□□ -1.65
BRP1	YGL007W	SRC1	Q03707	834 aa		4.73	□□□□□ -1.65
BRP1	YGL007W	SPT23	P35210	1082 aa		4.72	□□□□□ -1.65
BRP1	YGL007W	ATH1	P48016	1211 aa		4.72	□□□□□ -1.65
BRP1	YGL007W	GUT1	P32190	709 aa		4.71	□□□□□ -1.66
BRP1	YGL007W	RGA1	P39083	1007 aa		4.71	□□□□□ -1.66
BRP1	YGL007W	MIF2	P35201	549 aa		4.7	□□□□□ -1.66
BRP1	YGL007W	PEX29	Q03370	554 aa		4.7	□□□□□ -1.66
BRP1	YGL007W	PTC3	P34221	468 aa	Known RBP	4.68	□□□□□ -1.66
BRP1	YGL007W	NST1	P53935	1240 aa		4.67	□□□□□ -1.66
BRP1	YGL007W	HAP5	Q02516	242 aa		4.67	□□□□□ -1.66
BRP1	YGL007W	EDS1	P38073	919 aa		4.65	□□□□□ -1.67
BRP1	YGL007W	BNI4	P53858	892 aa		4.65	□□□□□ -1.67
BRP1	YGL007W	YML082W	Q04533	649 aa	Known RBP	4.65	□□□□□ -1.67
BRP1	YGL007W	MPH3	P0CE00	602 aa		4.64	□□□□□ -1.67
BRP1	YGL007W	PTC2	P39966	464 aa	Known RBP	4.64	□□□□□ -1.67
BRP1	YGL007W	AI4	P03878	556 aa		4.63	□□□□□ -1.67
BRP1	YGL007W	MAK11	P20484	414 aa	Known RBP	4.63	□□□□□ -1.67
BRP1	YGL007W	SOL3	P38858	249 aa		4.63	□□□□□ -1.67
BRP1	YGL007W	MPC54	Q08550	464 aa		4.59	□□□□□ -1.67
BRP1	YGL007W	RAS1	P01119	309 aa		4.58	□□□□□ -1.68
BRP1	YGL007W	RAM2	P29703	316 aa		4.58	□□□□□ -1.68
BRP1	YGL007W	ILV3	P39522	585 aa	Known RBP	4.58	□□□□□ -1.68
BRP1	YGL007W	COQ8	P27697	501 aa		4.57	□□□□□ -1.68
BRP1	YGL007W	NMA111	P53920	997 aa		4.57	□□□□□ -1.68
BRP1	YGL007W	YGR273C	P53329	174 aa		4.53	□□□□□ -1.68
BRP1	YGL007W	TRK1	P12685	1235 aa		4.52	□□□□□ -1.69
BRP1	YGL007W	DPL1	Q05567	589 aa		4.52	□□□□□ -1.69
BRP1	YGL007W	SLI15	P38283	698 aa		4.51	□□□□□ -1.69
BRP1	YGL007W	YPR015C	Q12531	247 aa		4.5	□□□□□ -1.69
BRP1	YGL007W	AMS1	P22855	1083 aa		4.49	□□□□□ -1.69
BRP1	YGL007W	GYP1	Q08484	637 aa		4.49	□□□□□ -1.69
BRP1	YGL007W	RAM1	P22007	431 aa		4.47	□□□□□ -1.69
BRP1	YGL007W	ISU2	Q12056	156 aa		4.46	□□□□□ -1.7
BRP1	YGL007W	NOP53	Q12080	455 aa	Known RBP	4.46	□□□□□ -1.7
BRP1	YGL007W	YPL062W	Q02781	134 aa		4.43	□□□□□ -1.7
BRP1	YGL007W	SAS4	Q04003	481 aa		4.43	□□□□□ -1.7
BRP1	YGL007W	INO80	P53115	1489 aa		4.43	□□□□□ -1.7
BRP1	YGL007W	SDH2	P21801	266 aa		4.41	□□□□□ -1.7
BRP1	YGL007W	MON2	P48563	1636 aa	Predicted RBP	4.4	□□□□□ -1.7
BRP1	YGL007W	PDR1	P12383	1068 aa		4.4	□□□□□ -1.71
BRP1	YGL007W	CDC73	Q06697	393 aa		4.4	□□□□□ -1.71
BRP1	YGL007W	YEL077C	Q3E7X8	1277 aa		4.4	□□□□□ -1.71
BRP1	YGL007W	KEX1	P09620	729 aa		4.39	□□□□□ -1.71
BRP1	YGL007W	MRF1	P30775	413 aa	Predicted RBP	4.36	□□□□□ -1.71
BRP1	YGL007W	GAR1	P28007	205 aa	Known RBP	4.34	□□□□□ -1.71
BRP1	YGL007W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
BRP1	YGL007W	BRE2	P43132	505 aa		4.32	□□□□□ -1.72
BRP1	YGL007W	GCR2	Q01722	534 aa		4.32	□□□□□ -1.72
BRP1	YGL007W	YLR326W	Q06170	240 aa	Known RBP	4.31	□□□□□ -1.72
BRP1	YGL007W	PRT1	P06103	763 aa	Known RBP	4.3	□□□□□ -1.72
BRP1	YGL007W	RPP1B	P10622	106 aa	Known RBP	4.3	□□□□□ -1.72
BRP1	YGL007W	UBP14	P38237	781 aa	Known RBP	4.3	□□□□□ -1.72
BRP1	YGL007W	BUD20	Q08004	166 aa	Predicted RBP	4.3	□□□□□ -1.72
BRP1	YGL007W	ERG12	P07277	443 aa		4.29	□□□□□ -1.72
BRP1	YGL007W	VHR2	P40041	505 aa		4.29	□□□□□ -1.72
BRP1	YGL007W	AIR1	P40507	360 aa	Known RBP	4.29	□□□□□ -1.72
BRP1	YGL007W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
BRP1	YGL007W	RAD54	P32863	898 aa		4.27	□□□□□ -1.73
BRP1	YGL007W	YRR1	Q12172	810 aa		4.26	□□□□□ -1.73
BRP1	YGL007W	CST6	P40535	587 aa		4.25	□□□□□ -1.73
BRP1	YGL007W	CLA4	P48562	842 aa		4.25	□□□□□ -1.73
BRP1	YGL007W	STR2	P47164	639 aa		4.24	□□□□□ -1.73
BRP1	YGL007W	PEX21	P50091	288 aa		4.24	□□□□□ -1.73
BRP1	YGL007W	ISM1	P48526	1002 aa		4.23	□□□□□ -1.73
BRP1	YGL007W	SGS1	P35187	1447 aa		4.21	□□□□□ -1.73
BRP1	YGL007W	DNA2	P38859	1522 aa		4.21	□□□□□ -1.73
BRP1	YGL007W	TCB3	Q03640	1545 aa	Known RBP	4.21	□□□□□ -1.73
BRP1	YGL007W	SWR1	Q05471	1514 aa		4.21	□□□□□ -1.73
BRP1	YGL007W	MET22	P32179	357 aa		4.21	□□□□□ -1.74
BRP1	YGL007W	NUD1	P32336	851 aa		4.21	□□□□□ -1.74
BRP1	YGL007W	SET1	P38827	1080 aa	Known RBP	4.21	□□□□□ -1.74
BRP1	YGL007W	CDC4	P07834	779 aa		4.2	□□□□□ -1.74
BRP1	YGL007W	SPT16	P32558	1035 aa	Known RBP	4.2	□□□□□ -1.74
BRP1	YGL007W	NPL4	P33755	580 aa		4.2	□□□□□ -1.74
BRP1	YGL007W	LAM6	Q08001	693 aa		4.2	□□□□□ -1.74
BRP1	YGL007W	GCD11	P32481	527 aa	Known RBP	4.19	□□□□□ -1.74
BRP1	YGL007W	FRK1	Q03002	865 aa	Predicted RBP	4.19	□□□□□ -1.74
BRP1	YGL007W	TUM1	Q08686	304 aa	Known RBP	4.19	□□□□□ -1.74
BRP1	YGL007W	KIC1	P38692	1080 aa		4.18	□□□□□ -1.74
BRP1	YGL007W	CSC1	Q06538	782 aa		4.18	□□□□□ -1.74
BRP1	YGL007W	ENV9	Q08651	330 aa		4.18	□□□□□ -1.74
BRP1	YGL007W	TFB4	Q12004	338 aa		4.18	□□□□□ -1.74
BRP1	YGL007W	YDR090C	Q03193	310 aa		4.17	□□□□□ -1.74
BRP1	YGL007W	TY1B-DR4	Q07793	1604 aa		4.17	□□□□□ -1.74
BRP1	YGL007W	SEC2	P17065	759 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms