RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C KIN1P13185 1064 aa4.67□□□□□ -1.66
CDH1YGL003C DMA2P53924 522 aa4.67□□□□□ -1.66
CDH1YGL003C GYP5Q12344 894 aa4.67□□□□□ -1.66
CDH1YGL003C ABP1P15891 592 aaKnown RBP4.66□□□□□ -1.66
CDH1YGL003C UBP14P38237 781 aaKnown RBP4.66□□□□□ -1.66
CDH1YGL003C VHR2P40041 505 aa4.66□□□□□ -1.66
CDH1YGL003C DIT2P21595 489 aa4.66□□□□□ -1.66
CDH1YGL003C GLC3P32775 704 aa4.66□□□□□ -1.66
CDH1YGL003C YGR273CP53329 174 aa4.66□□□□□ -1.66
CDH1YGL003C YDR090CQ03193 310 aa4.65□□□□□ -1.67
CDH1YGL003C YLR326WQ06170 240 aaKnown RBP4.65□□□□□ -1.67
CDH1YGL003C KIC1P38692 1080 aa4.63□□□□□ -1.67
CDH1YGL003C RAD54P32863 898 aa4.63□□□□□ -1.67
CDH1YGL003C ATF2P53296 535 aa4.63□□□□□ -1.67
CDH1YGL003C YOL036WQ08206 761 aa4.63□□□□□ -1.67
CDH1YGL003C SOL3P38858 249 aa4.62□□□□□ -1.67
CDH1YGL003C MSB4Q12317 492 aa4.62□□□□□ -1.67
CDH1YGL003C KEX1P09620 729 aa4.61□□□□□ -1.67
CDH1YGL003C SIS1P25294 352 aaKnown RBP4.61□□□□□ -1.67
CDH1YGL003C DCW1P36091 449 aa4.61□□□□□ -1.67
CDH1YGL003C HGH1P48362 394 aaKnown RBP4.61□□□□□ -1.67
CDH1YGL003C HTA1P04911 132 aaKnown RBP4.6□□□□□ -1.67
CDH1YGL003C HTA2P04912 132 aa4.6□□□□□ -1.67
CDH1YGL003C SET4P42948 560 aa4.6□□□□□ -1.67
CDH1YGL003C NST1P53935 1240 aa4.6□□□□□ -1.67
CDH1YGL003C PSE1P32337 1089 aaKnown RBP4.59□□□□□ -1.67
CDH1YGL003C PCS60P38137 543 aaKnown RBP RIP-Chip data4.59□□□□□ -1.67not detected
CDH1YGL003C URN1Q06525 465 aaKnown RBP4.59□□□□□ -1.67
CDH1YGL003C AI4P03878 556 aa4.58□□□□□ -1.68
CDH1YGL003C MPH3P0CE00 602 aa4.58□□□□□ -1.68
CDH1YGL003C EAP1P36041 632 aaKnown RBP4.57□□□□□ -1.68
CDH1YGL003C RLF2Q12495 606 aa4.56□□□□□ -1.68
CDH1YGL003C AIM44Q99299 758 aa4.56□□□□□ -1.68
CDH1YGL003C GUA1P38625 525 aaKnown RBP4.55□□□□□ -1.68
CDH1YGL003C ORC6P38826 435 aa4.55□□□□□ -1.68
CDH1YGL003C HPC2Q01448 625 aa4.55□□□□□ -1.68
CDH1YGL003C WSC3Q12215 556 aa4.55□□□□□ -1.68
CDH1YGL003C RPP1BP10622 106 aaKnown RBP4.54□□□□□ -1.68
CDH1YGL003C ILV3P39522 585 aaKnown RBP4.54□□□□□ -1.68
CDH1YGL003C YEL023CP39992 682 aa4.54□□□□□ -1.68
CDH1YGL003C NAP1P25293 417 aaKnown RBP4.52□□□□□ -1.69
CDH1YGL003C CLB5P30283 435 aa4.52□□□□□ -1.69
CDH1YGL003C DAN4P47179 1161 aa4.52□□□□□ -1.69
CDH1YGL003C JIP4Q03361 876 aa4.52□□□□□ -1.69
CDH1YGL003C SSA2P10592 639 aaKnown RBP4.52□□□□□ -1.69
CDH1YGL003C PTC4P38089 393 aa4.52□□□□□ -1.69
CDH1YGL003C TEA1P47988 759 aa4.52□□□□□ -1.69
CDH1YGL003C TRP5P00931 707 aaKnown RBP4.51□□□□□ -1.69
CDH1YGL003C SLI15P38283 698 aa4.51□□□□□ -1.69
CDH1YGL003C UBP9P39967 754 aa4.51□□□□□ -1.69
CDH1YGL003C VNX1P42839 908 aa4.51□□□□□ -1.69
CDH1YGL003C CSC1Q06538 782 aa4.51□□□□□ -1.69
CDH1YGL003C GAP1P19145 602 aaPredicted RBP4.5□□□□□ -1.69
CDH1YGL003C RGR1P19263 1082 aa4.5□□□□□ -1.69
CDH1YGL003C CSN12P47130 423 aa4.5□□□□□ -1.69
CDH1YGL003C BRL1P38770 471 aa4.49□□□□□ -1.69
CDH1YGL003C TIF11P38912 153 aaKnown RBP4.49□□□□□ -1.69
CDH1YGL003C MVP1P40959 511 aaKnown RBP4.49□□□□□ -1.69
CDH1YGL003C YBL029C-AQ3E756 94 aa4.49□□□□□ -1.69
CDH1YGL003C ULI1P43604 169 aa4.49□□□□□ -1.69
CDH1YGL003C TFB4Q12004 338 aa4.49□□□□□ -1.69
CDH1YGL003C TFB3Q03290 321 aa4.48□□□□□ -1.69
CDH1YGL003C SPP1Q03012 353 aa4.46□□□□□ -1.69
CDH1YGL003C YNL035CP53962 389 aaKnown RBP4.46□□□□□ -1.7
CDH1YGL003C CDC73Q06697 393 aa4.46□□□□□ -1.7
CDH1YGL003C IOC2Q12072 812 aa4.46□□□□□ -1.7
CDH1YGL003C YPR109WQ06104 294 aa4.45□□□□□ -1.7
CDH1YGL003C PEX21P50091 288 aa4.44□□□□□ -1.7
CDH1YGL003C KTR1P27810 393 aaKnown RBP4.43□□□□□ -1.7
CDH1YGL003C HST2P53686 357 aa4.43□□□□□ -1.7
CDH1YGL003C NIS1P53939 407 aa4.43□□□□□ -1.7
CDH1YGL003C YMR196WQ04336 1088 aa4.43□□□□□ -1.7
CDH1YGL003C DPL1Q05567 589 aa4.43□□□□□ -1.7
CDH1YGL003C GLN1P32288 370 aaKnown RBP4.43□□□□□ -1.7
CDH1YGL003C SEC61P32915 480 aa4.43□□□□□ -1.7
CDH1YGL003C FPK1P53739 893 aa4.43□□□□□ -1.7
CDH1YGL003C SIT4P20604 311 aa4.42□□□□□ -1.7
CDH1YGL003C PKC1P24583 1151 aa4.42□□□□□ -1.7
CDH1YGL003C YRB30P53107 440 aaPredicted RBP4.42□□□□□ -1.7
CDH1YGL003C PML39Q03760 334 aa4.42□□□□□ -1.7
CDH1YGL003C MPC54Q08550 464 aa4.42□□□□□ -1.7
CDH1YGL003C RTG1P32607 177 aa4.41□□□□□ -1.7
CDH1YGL003C IOC4Q04213 475 aa4.41□□□□□ -1.7
CDH1YGL003C TUM1Q08686 304 aaKnown RBP4.41□□□□□ -1.7
CDH1YGL003C TYW1Q08960 810 aaKnown RBP4.41□□□□□ -1.7
CDH1YGL003C MMP1Q12372 583 aa4.41□□□□□ -1.7
CDH1YGL003C MID1P41821 548 aa4.41□□□□□ -1.7
CDH1YGL003C ISU2Q12056 156 aa4.41□□□□□ -1.7
CDH1YGL003C PEX29Q03370 554 aa4.4□□□□□ -1.71
CDH1YGL003C LDB19Q12502 818 aa4.4□□□□□ -1.71
CDH1YGL003C TFG1P41895 735 aaPredicted RBP4.39□□□□□ -1.71
CDH1YGL003C CSE4P36012 229 aa4.38□□□□□ -1.71
CDH1YGL003C YBL036CP38197 257 aa4.38□□□□□ -1.71
CDH1YGL003C BIM1P40013 344 aa4.38□□□□□ -1.71
CDH1YGL003C YJL007CP47080 104 aa4.38□□□□□ -1.71
CDH1YGL003C RTF1P53064 558 aa4.38□□□□□ -1.71
CDH1YGL003C PKH3Q03306 898 aaPredicted RBP4.38□□□□□ -1.71
CDH1YGL003C YRR1Q12172 810 aa4.38□□□□□ -1.71
CDH1YGL003C ESS1P22696 170 aa4.38□□□□□ -1.71
CDH1YGL003C YDL129WQ07555 291 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms