RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C DNF1P32660 1571 aa19.25■□□□□ 0.67
PHO4YFR034C NTE1Q04958 1679 aa19.21■□□□□ 0.67
PHO4YFR034C TRM732Q03496 1420 aa19.21■□□□□ 0.67
PHO4YFR034C SNT2P53127 1403 aa19.17■□□□□ 0.66
PHO4YFR034C RPO21P04050 1733 aaKnown RBP19.14■□□□□ 0.65
PHO4YFR034C GEA1P47102 1408 aaPredicted RBP19.12■□□□□ 0.65
PHO4YFR034C IFH1P39520 1085 aa19.05■□□□□ 0.64
PHO4YFR034C IKI3Q06706 1349 aaKnown RBP19■□□□□ 0.63
PHO4YFR034C GEA2P39993 1459 aaKnown RBP19■□□□□ 0.63
PHO4YFR034C NUP170P38181 1502 aa19■□□□□ 0.63
PHO4YFR034C TY3B-GQ99315 1547 aa18.99■□□□□ 0.63
PHO4YFR034C NUP159P40477 1460 aa18.97■□□□□ 0.63
PHO4YFR034C IRC20Q06554 1556 aa18.97■□□□□ 0.63
PHO4YFR034C YBT1P32386 1661 aa18.92■□□□□ 0.62
PHO4YFR034C RTT106P40161 455 aa18.88■□□□□ 0.61
PHO4YFR034C MET5P47169 1442 aa18.87■□□□□ 0.61
PHO4YFR034C YRF1-1P0CX20 1796 aa18.85■□□□□ 0.61
PHO4YFR034C YRF1-5P0CX21 1796 aa18.85■□□□□ 0.61
PHO4YFR034C YRF1-8P0CX22 1796 aa18.85■□□□□ 0.61
PHO4YFR034C VPS15P22219 1454 aa18.82■□□□□ 0.6
PHO4YFR034C CAT8P39113 1433 aa18.8■□□□□ 0.6
PHO4YFR034C PDR12Q02785 1511 aa18.77■□□□□ 0.6
PHO4YFR034C SPO14P36126 1683 aa18.76■□□□□ 0.59
PHO4YFR034C SSM4P40318 1319 aa18.74■□□□□ 0.59
PHO4YFR034C GDB1Q06625 1536 aa18.72■□□□□ 0.59
PHO4YFR034C PDR10P51533 1564 aa18.68■□□□□ 0.58
PHO4YFR034C ARO1P08566 1588 aaKnown RBP18.65■□□□□ 0.58
PHO4YFR034C MET10P39692 1035 aa18.64■□□□□ 0.57
PHO4YFR034C NUP157P40064 1391 aaKnown RBP18.59■□□□□ 0.57
PHO4YFR034C SRB8P25648 1427 aa18.52■□□□□ 0.56
PHO4YFR034C BUD3P25558 1636 aa18.45■□□□□ 0.54
PHO4YFR034C IQG1Q12280 1495 aa18.44■□□□□ 0.54
PHO4YFR034C LTE1P07866 1435 aa18.43■□□□□ 0.54
PHO4YFR034C CKB1P43639 278 aa18.42■□□□□ 0.54
PHO4YFR034C YSP2Q06681 1438 aa18.36■□□□□ 0.53
PHO4YFR034C GCN2P15442 1659 aa18.32■□□□□ 0.52
PHO4YFR034C MMS1Q06211 1407 aa18.31■□□□□ 0.52
PHO4YFR034C DOP1Q03921 1698 aa18.26■□□□□ 0.51
PHO4YFR034C SEC7P11075 2009 aaKnown RBP18.22■□□□□ 0.51
PHO4YFR034C TRM3Q07527 1436 aa18.21■□□□□ 0.51
PHO4YFR034C CHC1P22137 1653 aaKnown RBP18.21■□□□□ 0.51
PHO4YFR034C BUD21Q08492 214 aaPredicted RBP18.2■□□□□ 0.5
PHO4YFR034C DRS2P39524 1355 aa18.19■□□□□ 0.5
PHO4YFR034C BNR1P40450 1375 aa18.17■□□□□ 0.5
PHO4YFR034C YOR093CQ12275 1648 aa18.11■□□□□ 0.49
PHO4YFR034C BNI1P41832 1953 aa18.09■□□□□ 0.49
PHO4YFR034C PDR5P33302 1511 aaKnown RBP18.03■□□□□ 0.48
PHO4YFR034C ITT1Q04638 464 aa17.96■□□□□ 0.47
PHO4YFR034C VMR1P38735 1592 aa17.94■□□□□ 0.46
PHO4YFR034C NUP188P52593 1655 aaKnown RBP17.93■□□□□ 0.46
PHO4YFR034C NOP7P53261 605 aaKnown RBP17.9■□□□□ 0.46
PHO4YFR034C DNF2Q12675 1612 aa17.89■□□□□ 0.45
PHO4YFR034C IML1P47170 1584 aa17.84■□□□□ 0.45
PHO4YFR034C PAF1P38351 445 aa17.84■□□□□ 0.45
PHO4YFR034C POL5P39985 1022 aaKnown RBP17.79■□□□□ 0.44
PHO4YFR034C PDR11P40550 1411 aa17.77■□□□□ 0.44
PHO4YFR034C BFR2Q06631 534 aaKnown RBP17.76■□□□□ 0.43
PHO4YFR034C RAV1P47104 1357 aa17.76■□□□□ 0.43
PHO4YFR034C RTC1Q08281 1341 aa17.67■□□□□ 0.42
PHO4YFR034C URN1Q06525 465 aaKnown RBP17.61■□□□□ 0.41
PHO4YFR034C NUP192P47054 1683 aa17.6■□□□□ 0.41
PHO4YFR034C TY3B-IQ7LHG5 1498 aaKnown RBP17.57■□□□□ 0.4
PHO4YFR034C IPL1P38991 367 aa17.56■□□□□ 0.4
PHO4YFR034C TYS1P36421 394 aaKnown RBP17.52■□□□□ 0.4
PHO4YFR034C DNF3Q12674 1656 aa17.5■□□□□ 0.39
PHO4YFR034C HAP1P0CE41 1502 aa17.49■□□□□ 0.39
PHO4YFR034C YAP3P38749 330 aa17.49■□□□□ 0.39
PHO4YFR034C TAF5P38129 798 aa17.45■□□□□ 0.38
PHO4YFR034C ESL2P36168 1195 aa17.44■□□□□ 0.38
PHO4YFR034C MHP1P43638 1398 aa17.43■□□□□ 0.38
PHO4YFR034C SEC3P33332 1336 aaKnown RBP17.43■□□□□ 0.38
PHO4YFR034C ORC1P54784 914 aaPredicted RBP17.4■□□□□ 0.38
PHO4YFR034C YLR419WQ06698 1435 aaKnown RBP17.39■□□□□ 0.38
PHO4YFR034C BCK1Q01389 1478 aa17.34■□□□□ 0.37
PHO4YFR034C KIP3P53086 805 aaKnown RBP17.33■□□□□ 0.36
PHO4YFR034C SPT7P35177 1332 aa17.31■□□□□ 0.36
PHO4YFR034C RAD9P14737 1309 aa17.28■□□□□ 0.36
PHO4YFR034C NSR1P27476 414 aaKnown RBP RIP-Chip data17.25■□□□□ 0.35 RIP-Chip
PHO4YFR034C ALD4P46367 519 aaKnown RBP17.25■□□□□ 0.35
PHO4YFR034C ENP1P38333 483 aaKnown RBP17.23■□□□□ 0.35
PHO4YFR034C ABP1P15891 592 aaKnown RBP17.22■□□□□ 0.35
PHO4YFR034C SPE2P21182 396 aa17.21■□□□□ 0.35
PHO4YFR034C SCT1P32784 759 aa17.21■□□□□ 0.35
PHO4YFR034C TAF8Q03750 510 aa17.2■□□□□ 0.34
PHO4YFR034C CAB1Q04430 367 aa17.18■□□□□ 0.34
PHO4YFR034C PDS5Q04264 1277 aa17.16■□□□□ 0.34
PHO4YFR034C KRE5P22023 1365 aa17.14■□□□□ 0.33
PHO4YFR034C NAP1P25293 417 aaKnown RBP17.13■□□□□ 0.33
PHO4YFR034C PSD2P53037 1138 aaKnown RBP17.13■□□□□ 0.33
PHO4YFR034C MAK10Q02197 733 aa17.13■□□□□ 0.33
PHO4YFR034C MLP1Q02455 1875 aaKnown RBP17.12■□□□□ 0.33
PHO4YFR034C MRX12P47084 519 aa17.11■□□□□ 0.33
PHO4YFR034C CFT1Q06632 1357 aaKnown RBP17.09■□□□□ 0.33
PHO4YFR034C LEU3P08638 886 aa17.07■□□□□ 0.32
PHO4YFR034C USO1P25386 1790 aa17.07■□□□□ 0.32
PHO4YFR034C TY1B-NL2Q99337 1749 aaKnown RBP17.06■□□□□ 0.32
PHO4YFR034C RIA1P53893 1110 aa17.03■□□□□ 0.32
PHO4YFR034C CHZ1P40019 153 aaPredicted RBP17.01■□□□□ 0.31
PHO4YFR034C NST1P53935 1240 aa16.95■□□□□ 0.3
PHO4YFR034C RTG3P38165 486 aa16.94■□□□□ 0.3
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms