RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeastyeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB3YFR024C-A YRF1-1P0CX20 1796 aa14.73□□□□□ -0.05
LSB3YFR024C-A YRF1-5P0CX21 1796 aa14.73□□□□□ -0.05
LSB3YFR024C-A YRF1-8P0CX22 1796 aa14.73□□□□□ -0.05
LSB3YFR024C-A GEA2P39993 1459 aaKnown RBP14.71□□□□□ -0.05
LSB3YFR024C-A SNQ2P32568 1501 aaKnown RBP14.69□□□□□ -0.06
LSB3YFR024C-A VPS15P22219 1454 aa14.68□□□□□ -0.06
LSB3YFR024C-A STH1P32597 1359 aa14.63□□□□□ -0.07
LSB3YFR024C-A SNT2P53127 1403 aa14.6□□□□□ -0.07
LSB3YFR024C-A BNI1P41832 1953 aa14.58□□□□□ -0.08
LSB3YFR024C-A MLP2P40457 1679 aa14.56□□□□□ -0.08
LSB3YFR024C-A ULS1Q08562 1619 aa14.51□□□□□ -0.09
LSB3YFR024C-A DRS2P39524 1355 aa14.49□□□□□ -0.09
LSB3YFR024C-A PDR15Q04182 1529 aaKnown RBP14.48□□□□□ -0.09
LSB3YFR024C-A ITT1Q04638 464 aa14.47□□□□□ -0.09
LSB3YFR024C-A PDR12Q02785 1511 aa14.45□□□□□ -0.1
LSB3YFR024C-A SPO14P36126 1683 aa14.45□□□□□ -0.1
LSB3YFR024C-A RTT106P40161 455 aa14.44□□□□□ -0.1
LSB3YFR024C-A MET10P39692 1035 aa14.43□□□□□ -0.1
LSB3YFR024C-A NUP170P38181 1502 aa14.43□□□□□ -0.1
LSB3YFR024C-A SAS10Q12136 610 aaPredicted RBP14.42□□□□□ -0.1
LSB3YFR024C-A TAF7Q05021 590 aa14.4□□□□□ -0.1
LSB3YFR024C-A IRC20Q06554 1556 aa14.4□□□□□ -0.1
LSB3YFR024C-A MMS1Q06211 1407 aa14.38□□□□□ -0.11
LSB3YFR024C-A GDB1Q06625 1536 aa14.37□□□□□ -0.11
LSB3YFR024C-A IQG1Q12280 1495 aa14.28□□□□□ -0.12
LSB3YFR024C-A NUP157P40064 1391 aaKnown RBP14.28□□□□□ -0.12
LSB3YFR024C-A DOP1Q03921 1698 aa14.25□□□□□ -0.13
LSB3YFR024C-A BUD3P25558 1636 aa14.25□□□□□ -0.13
LSB3YFR024C-A TRM3Q07527 1436 aa14.25□□□□□ -0.13
LSB3YFR024C-A PDR10P51533 1564 aa14.24□□□□□ -0.13
LSB3YFR024C-A GEA1P47102 1408 aaPredicted RBP14.23□□□□□ -0.13
LSB3YFR024C-A DNF2Q12675 1612 aa14.22□□□□□ -0.13
LSB3YFR024C-A IFH1P39520 1085 aa14.21□□□□□ -0.14
LSB3YFR024C-A CAT8P39113 1433 aa14.2□□□□□ -0.14
LSB3YFR024C-A YBT1P32386 1661 aa14.17□□□□□ -0.14
LSB3YFR024C-A MIF2P35201 549 aa14.17□□□□□ -0.14
LSB3YFR024C-A TY3B-GQ99315 1547 aa14.16□□□□□ -0.14
LSB3YFR024C-A ABP1P15891 592 aaKnown RBP14.14□□□□□ -0.15
LSB3YFR024C-A CHC1P22137 1653 aaKnown RBP14.1□□□□□ -0.15
LSB3YFR024C-A ARO1P08566 1588 aaKnown RBP14.07□□□□□ -0.16
LSB3YFR024C-A SEC7P11075 2009 aaKnown RBP13.96□□□□□ -0.17
LSB3YFR024C-A YSP2Q06681 1438 aa13.96□□□□□ -0.18
LSB3YFR024C-A CKB1P43639 278 aa13.93□□□□□ -0.18
LSB3YFR024C-A YOR093CQ12275 1648 aa13.9□□□□□ -0.18
LSB3YFR024C-A BNR1P40450 1375 aa13.89□□□□□ -0.19
LSB3YFR024C-A SRB8P25648 1427 aa13.87□□□□□ -0.19
LSB3YFR024C-A DNF3Q12674 1656 aa13.79□□□□□ -0.2
LSB3YFR024C-A IKI3Q06706 1349 aaKnown RBP13.74□□□□□ -0.21
LSB3YFR024C-A YAP3P38749 330 aa13.7□□□□□ -0.22
LSB3YFR024C-A YFR006WP43590 535 aa13.7□□□□□ -0.22
LSB3YFR024C-A BUD21Q08492 214 aaPredicted RBP13.67□□□□□ -0.22
LSB3YFR024C-A URN1Q06525 465 aaKnown RBP13.66□□□□□ -0.22
LSB3YFR024C-A NUP188P52593 1655 aaKnown RBP13.63□□□□□ -0.23
LSB3YFR024C-A SSM4P40318 1319 aa13.57□□□□□ -0.24
LSB3YFR024C-A VMR1P38735 1592 aa13.56□□□□□ -0.24
LSB3YFR024C-A HAP1P0CE41 1502 aa13.56□□□□□ -0.24
LSB3YFR024C-A IML1P47170 1584 aa13.52□□□□□ -0.25
LSB3YFR024C-A MAK10Q02197 733 aa13.51□□□□□ -0.25
LSB3YFR024C-A GCN2P15442 1659 aa13.5□□□□□ -0.25
LSB3YFR024C-A IPL1P38991 367 aa13.5□□□□□ -0.25
LSB3YFR024C-A PDR5P33302 1511 aaKnown RBP13.48□□□□□ -0.25
LSB3YFR024C-A USO1P25386 1790 aa13.42□□□□□ -0.26
LSB3YFR024C-A TYS1P36421 394 aaKnown RBP13.4□□□□□ -0.26
LSB3YFR024C-A TY1B-NL2Q99337 1749 aaKnown RBP13.37□□□□□ -0.27
LSB3YFR024C-A PDR11P40550 1411 aa13.31□□□□□ -0.28
LSB3YFR024C-A YMR196WQ04336 1088 aa13.24□□□□□ -0.29
LSB3YFR024C-A PAF1P38351 445 aa13.22□□□□□ -0.29
LSB3YFR024C-A RAV1P47104 1357 aa13.22□□□□□ -0.29
LSB3YFR024C-A THI12P42883 340 aa13.16□□□□□ -0.3
LSB3YFR024C-A THI5P43534 340 aa13.16□□□□□ -0.3
LSB3YFR024C-A THI11P47183 340 aa13.16□□□□□ -0.3
LSB3YFR024C-A THI13Q07748 340 aa13.16□□□□□ -0.3
LSB3YFR024C-A BCK1Q01389 1478 aa13.14□□□□□ -0.31
LSB3YFR024C-A BFR2Q06631 534 aaKnown RBP13.13□□□□□ -0.31
LSB3YFR024C-A CFT1Q06632 1357 aaKnown RBP13.12□□□□□ -0.31
LSB3YFR024C-A RTC1Q08281 1341 aa13.12□□□□□ -0.31
LSB3YFR024C-A KRE5P22023 1365 aa13.11□□□□□ -0.31
LSB3YFR024C-A NUP192P47054 1683 aa13.11□□□□□ -0.31
LSB3YFR024C-A NOP7P53261 605 aaKnown RBP13.1□□□□□ -0.31
LSB3YFR024C-A MRX12P47084 519 aa13.09□□□□□ -0.31
LSB3YFR024C-A RIA1P53893 1110 aa13.06□□□□□ -0.32
LSB3YFR024C-A RAD9P14737 1309 aa13□□□□□ -0.33
LSB3YFR024C-A ALD4P46367 519 aaKnown RBP12.99□□□□□ -0.33
LSB3YFR024C-A YNR029CP53729 429 aaKnown RBP12.99□□□□□ -0.33
LSB3YFR024C-A CAB1Q04430 367 aa12.97□□□□□ -0.33
LSB3YFR024C-A FAP1P53971 965 aa12.96□□□□□ -0.33
LSB3YFR024C-A ESL2P36168 1195 aa12.91□□□□□ -0.34
LSB3YFR024C-A NAP1P25293 417 aaKnown RBP12.89□□□□□ -0.35
LSB3YFR024C-A TY3B-IQ7LHG5 1498 aaKnown RBP12.86□□□□□ -0.35
LSB3YFR024C-A TAF5P38129 798 aa12.85□□□□□ -0.35
LSB3YFR024C-A PTP3P40048 928 aa12.84□□□□□ -0.35
LSB3YFR024C-A TAF8Q03750 510 aa12.81□□□□□ -0.36
LSB3YFR024C-A YAH1Q12184 172 aaKnown RBP12.81□□□□□ -0.36
LSB3YFR024C-A CPS1P27614 576 aa12.73□□□□□ -0.37
LSB3YFR024C-A RCM1P53972 490 aa12.72□□□□□ -0.37
LSB3YFR024C-A RRP5Q05022 1729 aaKnown RBP12.71□□□□□ -0.38
LSB3YFR024C-A SPE2P21182 396 aa12.7□□□□□ -0.38
LSB3YFR024C-A KIP3P53086 805 aaKnown RBP12.69□□□□□ -0.38
LSB3YFR024C-A APP1P53933 587 aa12.69□□□□□ -0.38
LSB3YFR024C-A YLR419WQ06698 1435 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms