RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C MAK21Q12176 1025 aaKnown RBP2.25□□□□□ -2.05
SWI4YER111C COX6P00427 148 aa2.24□□□□□ -2.05
SWI4YER111C NUP42P49686 430 aaKnown RBP2.24□□□□□ -2.05
SWI4YER111C TIF4632P39936 914 aaKnown RBP2.24□□□□□ -2.05
SWI4YER111C BRL1P38770 471 aa2.23□□□□□ -2.05
SWI4YER111C GRE2Q12068 342 aaKnown RBP2.23□□□□□ -2.05
SWI4YER111C TFB3Q03290 321 aa2.23□□□□□ -2.05
SWI4YER111C RPL34BP40525 121 aaKnown RBP2.23□□□□□ -2.05
SWI4YER111C YJL007CP47080 104 aa2.23□□□□□ -2.05
SWI4YER111C YAP5P40574 245 aa2.22□□□□□ -2.05
SWI4YER111C CSN12P47130 423 aa2.22□□□□□ -2.05
SWI4YER111C RAD54P32863 898 aa2.22□□□□□ -2.05
SWI4YER111C GTT3P39996 337 aa2.22□□□□□ -2.05
SWI4YER111C VMA1P17255 1071 aaKnown RBP2.21□□□□□ -2.06
SWI4YER111C PKC1P24583 1151 aa2.21□□□□□ -2.06
SWI4YER111C UBP14P38237 781 aaKnown RBP2.21□□□□□ -2.06
SWI4YER111C GYP5Q12344 894 aa2.21□□□□□ -2.06
SWI4YER111C GUT1P32190 709 aa2.21□□□□□ -2.06
SWI4YER111C DCW1P36091 449 aa2.21□□□□□ -2.06
SWI4YER111C HPC2Q01448 625 aa2.2□□□□□ -2.06
SWI4YER111C SSA2P10592 639 aaKnown RBP2.2□□□□□ -2.06
SWI4YER111C YMR196WQ04336 1088 aa2.2□□□□□ -2.06
SWI4YER111C TYW1Q08960 810 aaKnown RBP2.2□□□□□ -2.06
SWI4YER111C YBL036CP38197 257 aa2.19□□□□□ -2.06
SWI4YER111C BIM1P40013 344 aa2.19□□□□□ -2.06
SWI4YER111C TEA1P47988 759 aa2.19□□□□□ -2.06
SWI4YER111C YLR326WQ06170 240 aaKnown RBP2.19□□□□□ -2.06
SWI4YER111C YDR090CQ03193 310 aa2.19□□□□□ -2.06
SWI4YER111C YGR273CP53329 174 aa2.18□□□□□ -2.06
SWI4YER111C KEX1P09620 729 aa2.18□□□□□ -2.06
SWI4YER111C SET4P42948 560 aa2.18□□□□□ -2.06
SWI4YER111C PCS60P38137 543 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
SWI4YER111C YPR204WQ08995 1032 aa2.18□□□□□ -2.06
SWI4YER111C PSE1P32337 1089 aaKnown RBP2.17□□□□□ -2.06
SWI4YER111C ATG32P40458 529 aa2.17□□□□□ -2.06
SWI4YER111C SSA1P10591 642 aaKnown RBP2.16□□□□□ -2.06
SWI4YER111C TGL3P40308 642 aa2.16□□□□□ -2.06
SWI4YER111C PEX21P50091 288 aa2.16□□□□□ -2.06
SWI4YER111C PKH3Q03306 898 aaPredicted RBP2.16□□□□□ -2.06
SWI4YER111C RPP1BP10622 106 aaKnown RBP2.16□□□□□ -2.06
SWI4YER111C SLX8P40072 274 aa2.16□□□□□ -2.06
SWI4YER111C YML020WQ03722 664 aa2.16□□□□□ -2.06
SWI4YER111C YPR109WQ06104 294 aa2.16□□□□□ -2.06
SWI4YER111C WSC3Q12215 556 aa2.16□□□□□ -2.06
SWI4YER111C ERG12P07277 443 aa2.16□□□□□ -2.06
SWI4YER111C SSA4P22202 642 aaKnown RBP2.16□□□□□ -2.06
SWI4YER111C ARG8P18544 423 aa2.15□□□□□ -2.06
SWI4YER111C ESS1P22696 170 aa2.15□□□□□ -2.06
SWI4YER111C SCJ1P25303 377 aa2.15□□□□□ -2.06
SWI4YER111C CPS1P27614 576 aa2.15□□□□□ -2.06
SWI4YER111C GLN1P32288 370 aaKnown RBP2.15□□□□□ -2.06
SWI4YER111C YNL108CP53929 270 aa2.15□□□□□ -2.06
SWI4YER111C SUB2Q07478 446 aaKnown RBP2.15□□□□□ -2.06
SWI4YER111C MMP1Q12372 583 aa2.15□□□□□ -2.06
SWI4YER111C HTA1P04911 132 aaKnown RBP2.15□□□□□ -2.07
SWI4YER111C HTA2P04912 132 aa2.15□□□□□ -2.07
SWI4YER111C RTG2P32608 588 aaKnown RBP2.15□□□□□ -2.07
SWI4YER111C GEF1P37020 779 aa2.15□□□□□ -2.07
SWI4YER111C SOL3P38858 249 aa2.15□□□□□ -2.07
SWI4YER111C RPL34AP87262 121 aaPredicted RBP2.15□□□□□ -2.07
SWI4YER111C TIF1P10081 395 aaKnown RBP2.15□□□□□ -2.07
SWI4YER111C KTR1P27810 393 aaKnown RBP2.15□□□□□ -2.07
SWI4YER111C SAM3Q08986 587 aa2.15□□□□□ -2.07
SWI4YER111C RGR1P19263 1082 aa2.14□□□□□ -2.07
SWI4YER111C YOL036WQ08206 761 aa2.14□□□□□ -2.07
SWI4YER111C CLB5P30283 435 aa2.14□□□□□ -2.07
SWI4YER111C FPK1P53739 893 aa2.14□□□□□ -2.07
SWI4YER111C NSR1P27476 414 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
SWI4YER111C ORC6P38826 435 aa2.13□□□□□ -2.07
SWI4YER111C MVP1P40959 511 aaKnown RBP2.13□□□□□ -2.07
SWI4YER111C RAD59Q12223 238 aa2.13□□□□□ -2.07
SWI4YER111C NIS1P53939 407 aa2.13□□□□□ -2.07
SWI4YER111C CDC73Q06697 393 aa2.13□□□□□ -2.07
SWI4YER111C TUM1Q08686 304 aaKnown RBP2.13□□□□□ -2.07
SWI4YER111C YJU3P28321 313 aa2.13□□□□□ -2.07
SWI4YER111C SLY41P22215 453 aa2.12□□□□□ -2.07
SWI4YER111C SLD2P34252 453 aa2.12□□□□□ -2.07
SWI4YER111C ILV3P39522 585 aaKnown RBP2.12□□□□□ -2.07
SWI4YER111C CSC1Q06538 782 aa2.12□□□□□ -2.07
SWI4YER111C MPH3P0CE00 602 aa2.12□□□□□ -2.07
SWI4YER111C BIO2P32451 375 aa2.12□□□□□ -2.07
SWI4YER111C TTI1P36097 1038 aa2.12□□□□□ -2.07
SWI4YER111C KTR7P40504 517 aa2.12□□□□□ -2.07
SWI4YER111C SLI15P38283 698 aa2.11□□□□□ -2.07
SWI4YER111C YEL023CP39992 682 aa2.11□□□□□ -2.07
SWI4YER111C DAN4P47179 1161 aa2.11□□□□□ -2.07
SWI4YER111C HST2P53686 357 aa2.11□□□□□ -2.07
SWI4YER111C PEX29Q03370 554 aa2.11□□□□□ -2.07
SWI4YER111C YRR1Q12172 810 aa2.11□□□□□ -2.07
SWI4YER111C AI4P03878 556 aa2.1□□□□□ -2.07
SWI4YER111C YDJ1P25491 409 aaKnown RBP2.1□□□□□ -2.07
SWI4YER111C CDC3P32457 520 aaKnown RBP2.1□□□□□ -2.07
SWI4YER111C CSE4P36012 229 aa2.1□□□□□ -2.07
SWI4YER111C TFB4Q12004 338 aa2.1□□□□□ -2.07
SWI4YER111C TBF1Q02457 562 aa2.09□□□□□ -2.07
SWI4YER111C ENO1P00924 437 aaKnown RBP2.09□□□□□ -2.07
SWI4YER111C NPL4P33755 580 aa2.09□□□□□ -2.07
SWI4YER111C MID1P41821 548 aa2.09□□□□□ -2.07
SWI4YER111C YML083CQ04526 418 aa2.09□□□□□ -2.07
SWI4YER111C ENV9Q08651 330 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms