RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeastyeast

Gene TFB3, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB3YDR460W XRN1P22147 1528 aaKnown RBP6.72□□□□□ -1.33
TFB3YDR460W GTT3P39996 337 aa6.72□□□□□ -1.33
TFB3YDR460W EDS1P38073 919 aa6.71□□□□□ -1.34
TFB3YDR460W TIF11P38912 153 aaKnown RBP6.71□□□□□ -1.34
TFB3YDR460W NOP53Q12080 455 aaKnown RBP6.71□□□□□ -1.34
TFB3YDR460W VPS70P47161 811 aa6.7□□□□□ -1.34
TFB3YDR460W AIR2Q12476 344 aaKnown RBP6.7□□□□□ -1.34
TFB3YDR460W FKH1P40466 484 aa6.69□□□□□ -1.34
TFB3YDR460W VMA1P17255 1071 aaKnown RBP6.67□□□□□ -1.34
TFB3YDR460W CKB1P43639 278 aa6.67□□□□□ -1.34
TFB3YDR460W YCF1P39109 1515 aaKnown RBP6.66□□□□□ -1.34
TFB3YDR460W PTC3P34221 468 aaKnown RBP6.65□□□□□ -1.34
TFB3YDR460W LEU3P08638 886 aa6.64□□□□□ -1.35
TFB3YDR460W YJL171CP46992 396 aa6.63□□□□□ -1.35
TFB3YDR460W LDB19Q12502 818 aa6.62□□□□□ -1.35
TFB3YDR460W ULI1P43604 169 aa6.6□□□□□ -1.35
TFB3YDR460W SAM3Q08986 587 aa6.6□□□□□ -1.35
TFB3YDR460W SPB4P25808 606 aaPredicted RBP6.59□□□□□ -1.35
TFB3YDR460W LEO1P38439 464 aa6.59□□□□□ -1.35
TFB3YDR460W IOC2Q12072 812 aa6.59□□□□□ -1.35
TFB3YDR460W TAF2P23255 1407 aa6.59□□□□□ -1.36
TFB3YDR460W GRE2Q12068 342 aaKnown RBP6.58□□□□□ -1.36
TFB3YDR460W SSK2P53599 1579 aa6.57□□□□□ -1.36
TFB3YDR460W ATH1P48016 1211 aa6.56□□□□□ -1.36
TFB3YDR460W GUT1P32190 709 aa6.55□□□□□ -1.36
TFB3YDR460W REF2P42073 533 aaPredicted RBP6.55□□□□□ -1.36
TFB3YDR460W GYP5Q12344 894 aa6.55□□□□□ -1.36
TFB3YDR460W SKI3P17883 1432 aaKnown RBP6.55□□□□□ -1.36
TFB3YDR460W PBS2P08018 668 aa6.54□□□□□ -1.36
TFB3YDR460W BNI1P41832 1953 aa6.53□□□□□ -1.36
TFB3YDR460W MYO2P19524 1574 aaKnown RBP6.53□□□□□ -1.36
TFB3YDR460W DSF2P38213 736 aa6.53□□□□□ -1.36
TFB3YDR460W YOL036WQ08206 761 aa6.53□□□□□ -1.36
TFB3YDR460W MSB4Q12317 492 aa6.53□□□□□ -1.36
TFB3YDR460W BMT6Q12291 365 aa6.52□□□□□ -1.37
TFB3YDR460W MET5P47169 1442 aa6.51□□□□□ -1.37
TFB3YDR460W ABP1P15891 592 aaKnown RBP6.5□□□□□ -1.37
TFB3YDR460W NOP2P40991 618 aaKnown RBP6.5□□□□□ -1.37
TFB3YDR460W SET4P42948 560 aa6.5□□□□□ -1.37
TFB3YDR460W LTE1P07866 1435 aa6.5□□□□□ -1.37
TFB3YDR460W EAP1P36041 632 aaKnown RBP6.49□□□□□ -1.37
TFB3YDR460W CDC25P04821 1589 aa6.48□□□□□ -1.37
TFB3YDR460W DCW1P36091 449 aa6.48□□□□□ -1.37
TFB3YDR460W UFD4P33202 1483 aa6.47□□□□□ -1.37
TFB3YDR460W RPN1P38764 993 aaKnown RBP6.47□□□□□ -1.37
TFB3YDR460W YGR273CP53329 174 aa6.47□□□□□ -1.37
TFB3YDR460W MAK21Q12176 1025 aaKnown RBP6.47□□□□□ -1.37
TFB3YDR460W DNF1P32660 1571 aa6.47□□□□□ -1.37
TFB3YDR460W SIN3P22579 1536 aa6.46□□□□□ -1.37
TFB3YDR460W TRP5P00931 707 aaKnown RBP6.46□□□□□ -1.38
TFB3YDR460W RTG1P32607 177 aa6.46□□□□□ -1.38
TFB3YDR460W SOL3P38858 249 aa6.46□□□□□ -1.38
TFB3YDR460W VHR2P40041 505 aa6.46□□□□□ -1.38
TFB3YDR460W MAM3Q12296 706 aa6.46□□□□□ -1.38
TFB3YDR460W RPA190P10964 1664 aaKnown RBP6.45□□□□□ -1.38
TFB3YDR460W COX6P00427 148 aa6.45□□□□□ -1.38
TFB3YDR460W HTA1P04911 132 aaKnown RBP6.45□□□□□ -1.38
TFB3YDR460W HTA2P04912 132 aa6.45□□□□□ -1.38
TFB3YDR460W UBP14P38237 781 aaKnown RBP6.45□□□□□ -1.38
TFB3YDR460W ITT1Q04638 464 aa6.44□□□□□ -1.38
TFB3YDR460W YLR326WQ06170 240 aaKnown RBP6.44□□□□□ -1.38
TFB3YDR460W IES2P40154 320 aa6.42□□□□□ -1.38
TFB3YDR460W NST1P53935 1240 aa6.42□□□□□ -1.38
TFB3YDR460W YDR090CQ03193 310 aa6.42□□□□□ -1.38
TFB3YDR460W ESC1Q03661 1658 aaKnown RBP6.42□□□□□ -1.38
TFB3YDR460W CHD1P32657 1468 aa6.41□□□□□ -1.38
TFB3YDR460W ESP1Q03018 1630 aa6.41□□□□□ -1.38
TFB3YDR460W NCR1Q12200 1170 aa6.41□□□□□ -1.38
TFB3YDR460W KEX1P09620 729 aa6.4□□□□□ -1.38
TFB3YDR460W CAB3P36076 571 aa6.4□□□□□ -1.38
TFB3YDR460W YNL035CP53962 389 aaKnown RBP6.4□□□□□ -1.38
TFB3YDR460W KIC1P38692 1080 aa6.39□□□□□ -1.39
TFB3YDR460W YNR021WP53723 404 aaKnown RBP6.39□□□□□ -1.39
TFB3YDR460W RKR1Q04781 1562 aa6.39□□□□□ -1.39
TFB3YDR460W MPH3P0CE00 602 aa6.38□□□□□ -1.39
TFB3YDR460W RAD54P32863 898 aa6.38□□□□□ -1.39
TFB3YDR460W SEC61P32915 480 aa6.38□□□□□ -1.39
TFB3YDR460W YEL023CP39992 682 aa6.38□□□□□ -1.39
TFB3YDR460W NUP42P49686 430 aaKnown RBP6.38□□□□□ -1.39
TFB3YDR460W GEA2P39993 1459 aaKnown RBP6.37□□□□□ -1.39
TFB3YDR460W SCC2Q04002 1493 aa6.37□□□□□ -1.39
TFB3YDR460W AI4P03878 556 aa6.37□□□□□ -1.39
TFB3YDR460W DIT2P21595 489 aa6.37□□□□□ -1.39
TFB3YDR460W PCS60P38137 543 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
TFB3YDR460W TY1B-BRQ12193 1756 aa6.36□□□□□ -1.39
TFB3YDR460W TY1B-GR3Q12316 1755 aa6.36□□□□□ -1.39
TFB3YDR460W TY1B-ORQ92393 1755 aa6.36□□□□□ -1.39
TFB3YDR460W RPO31P04051 1460 aa6.36□□□□□ -1.39
TFB3YDR460W PTC4P38089 393 aa6.35□□□□□ -1.39
TFB3YDR460W ILV3P39522 585 aaKnown RBP6.35□□□□□ -1.39
TFB3YDR460W MMS1Q06211 1407 aa6.34□□□□□ -1.39
TFB3YDR460W JIP4Q03361 876 aa6.34□□□□□ -1.39
TFB3YDR460W IRC20Q06554 1556 aa6.34□□□□□ -1.39
TFB3YDR460W PAN1P32521 1480 aa6.34□□□□□ -1.4
TFB3YDR460W TY2B-LR1P0C2J3 1770 aa6.34□□□□□ -1.4
TFB3YDR460W TY2B-FP0CX63 1770 aa6.34□□□□□ -1.4
TFB3YDR460W TY2B-GR2P0CX64 1770 aa6.34□□□□□ -1.4
TFB3YDR460W TY2B-CP25384 1770 aa6.34□□□□□ -1.4
TFB3YDR460W TY2B-DR2Q03494 1770 aa6.34□□□□□ -1.4
TFB3YDR460W TY1B-DR1Q03855 1755 aa6.34□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms