RNA–Protein interactions for RNA: YDR337W

MRPS28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene MRPS28, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPS28YDR337W NUP159P40477 1460 aa9.93□□□□□ -0.82
MRPS28YDR337W GEA1P47102 1408 aaPredicted RBP9.92□□□□□ -0.82
MRPS28YDR337W ESC1Q03661 1658 aaKnown RBP9.92□□□□□ -0.82
MRPS28YDR337W PDR15Q04182 1529 aaKnown RBP9.91□□□□□ -0.82
MRPS28YDR337W RPA190P10964 1664 aaKnown RBP9.9□□□□□ -0.83
MRPS28YDR337W IKI3Q06706 1349 aaKnown RBP9.86□□□□□ -0.83
MRPS28YDR337W VPS15P22219 1454 aa9.84□□□□□ -0.83
MRPS28YDR337W GEA2P39993 1459 aaKnown RBP9.83□□□□□ -0.84
MRPS28YDR337W ULS1Q08562 1619 aa9.82□□□□□ -0.84
MRPS28YDR337W CKB1P43639 278 aa9.82□□□□□ -0.84
MRPS28YDR337W TY1B-JR2P47100 1755 aaKnown RBP9.82□□□□□ -0.84
MRPS28YDR337W TY1B-ER2Q03619 1755 aa9.82□□□□□ -0.84
MRPS28YDR337W TY1B-MR1Q04214 1755 aa9.82□□□□□ -0.84
MRPS28YDR337W TY1B-MR2Q04670 1755 aaKnown RBP9.82□□□□□ -0.84
MRPS28YDR337W TY1B-LR1Q12088 1755 aaKnown RBP9.82□□□□□ -0.84
MRPS28YDR337W TY1B-NL1Q12112 1755 aa9.82□□□□□ -0.84
MRPS28YDR337W TY1B-GR1Q12141 1755 aa9.82□□□□□ -0.84
MRPS28YDR337W TY1B-BLQ12490 1755 aa9.82□□□□□ -0.84
MRPS28YDR337W NUP157P40064 1391 aaKnown RBP9.79□□□□□ -0.84
MRPS28YDR337W MLP2P40457 1679 aa9.79□□□□□ -0.84
MRPS28YDR337W SSM4P40318 1319 aa9.77□□□□□ -0.85
MRPS28YDR337W CAT8P39113 1433 aa9.75□□□□□ -0.85
MRPS28YDR337W NTE1Q04958 1679 aa9.74□□□□□ -0.85
MRPS28YDR337W LTE1P07866 1435 aa9.73□□□□□ -0.85
MRPS28YDR337W RPO21P04050 1733 aaKnown RBP9.73□□□□□ -0.85
MRPS28YDR337W ITT1Q04638 464 aa9.72□□□□□ -0.85
MRPS28YDR337W TY3B-GQ99315 1547 aa9.72□□□□□ -0.85
MRPS28YDR337W IRC20Q06554 1556 aa9.71□□□□□ -0.86
MRPS28YDR337W PDR12Q02785 1511 aa9.7□□□□□ -0.86
MRPS28YDR337W YRF1-1P0CX20 1796 aa9.68□□□□□ -0.86
MRPS28YDR337W YRF1-5P0CX21 1796 aa9.68□□□□□ -0.86
MRPS28YDR337W YRF1-8P0CX22 1796 aa9.68□□□□□ -0.86
MRPS28YDR337W PDR10P51533 1564 aa9.67□□□□□ -0.86
MRPS28YDR337W GDB1Q06625 1536 aa9.67□□□□□ -0.86
MRPS28YDR337W BUD21Q08492 214 aaPredicted RBP9.67□□□□□ -0.86
MRPS28YDR337W DRS2P39524 1355 aa9.64□□□□□ -0.87
MRPS28YDR337W SPO14P36126 1683 aa9.64□□□□□ -0.87
MRPS28YDR337W SRB8P25648 1427 aa9.64□□□□□ -0.87
MRPS28YDR337W IQG1Q12280 1495 aa9.63□□□□□ -0.87
MRPS28YDR337W YSP2Q06681 1438 aa9.62□□□□□ -0.87
MRPS28YDR337W NUP170P38181 1502 aa9.59□□□□□ -0.87
MRPS28YDR337W BNR1P40450 1375 aa9.58□□□□□ -0.88
MRPS28YDR337W ARO1P08566 1588 aaKnown RBP9.56□□□□□ -0.88
MRPS28YDR337W BUD3P25558 1636 aa9.56□□□□□ -0.88
MRPS28YDR337W MMS1Q06211 1407 aa9.54□□□□□ -0.88
MRPS28YDR337W YBT1P32386 1661 aa9.54□□□□□ -0.88
MRPS28YDR337W TRM3Q07527 1436 aa9.46□□□□□ -0.9
MRPS28YDR337W BNI1P41832 1953 aa9.45□□□□□ -0.9
MRPS28YDR337W TSR3Q12094 313 aaKnown RBP9.44□□□□□ -0.9
MRPS28YDR337W ABP1P15891 592 aaKnown RBP9.42□□□□□ -0.9
MRPS28YDR337W PAF1P38351 445 aa9.42□□□□□ -0.9
MRPS28YDR337W URN1Q06525 465 aaKnown RBP9.42□□□□□ -0.9
MRPS28YDR337W ISW2Q08773 1120 aa9.41□□□□□ -0.9
MRPS28YDR337W NOP7P53261 605 aaKnown RBP9.4□□□□□ -0.9
MRPS28YDR337W YAP3P38749 330 aa9.38□□□□□ -0.91
MRPS28YDR337W RPG1P38249 964 aaKnown RBP9.37□□□□□ -0.91
MRPS28YDR337W TYS1P36421 394 aaKnown RBP9.36□□□□□ -0.91
MRPS28YDR337W IPL1P38991 367 aa9.36□□□□□ -0.91
MRPS28YDR337W BFR2Q06631 534 aaKnown RBP9.35□□□□□ -0.91
MRPS28YDR337W SEC7P11075 2009 aaKnown RBP9.34□□□□□ -0.91
MRPS28YDR337W DOP1Q03921 1698 aa9.32□□□□□ -0.92
MRPS28YDR337W PDR11P40550 1411 aa9.3□□□□□ -0.92
MRPS28YDR337W ORC1P54784 914 aaPredicted RBP9.27□□□□□ -0.93
MRPS28YDR337W RTC1Q08281 1341 aa9.26□□□□□ -0.93
MRPS28YDR337W PDR5P33302 1511 aaKnown RBP9.26□□□□□ -0.93
MRPS28YDR337W RAV1P47104 1357 aa9.25□□□□□ -0.93
MRPS28YDR337W POL5P39985 1022 aaKnown RBP9.25□□□□□ -0.93
MRPS28YDR337W GCN2P15442 1659 aa9.24□□□□□ -0.93
MRPS28YDR337W TAF5P38129 798 aa9.24□□□□□ -0.93
MRPS28YDR337W CHC1P22137 1653 aaKnown RBP9.21□□□□□ -0.93
MRPS28YDR337W ESL2P36168 1195 aa9.2□□□□□ -0.94
MRPS28YDR337W MAK10Q02197 733 aa9.2□□□□□ -0.94
MRPS28YDR337W DNF2Q12675 1612 aa9.2□□□□□ -0.94
MRPS28YDR337W IML1P47170 1584 aa9.19□□□□□ -0.94
MRPS28YDR337W VMR1P38735 1592 aa9.18□□□□□ -0.94
MRPS28YDR337W YOR093CQ12275 1648 aa9.16□□□□□ -0.94
MRPS28YDR337W ALD4P46367 519 aaKnown RBP9.16□□□□□ -0.94
MRPS28YDR337W NUP188P52593 1655 aaKnown RBP9.16□□□□□ -0.94
MRPS28YDR337W KIP3P53086 805 aaKnown RBP9.15□□□□□ -0.94
MRPS28YDR337W CAB1Q04430 367 aa9.14□□□□□ -0.95
MRPS28YDR337W MIF2P35201 549 aa9.13□□□□□ -0.95
MRPS28YDR337W MRX12P47084 519 aa9.13□□□□□ -0.95
MRPS28YDR337W RAD9P14737 1309 aa9.12□□□□□ -0.95
MRPS28YDR337W YGL015CP33199 130 aa9.12□□□□□ -0.95
MRPS28YDR337W TAF8Q03750 510 aa9.12□□□□□ -0.95
MRPS28YDR337W SPE2P21182 396 aa9.09□□□□□ -0.95
MRPS28YDR337W RIA1P53893 1110 aa9.09□□□□□ -0.95
MRPS28YDR337W NAP1P25293 417 aaKnown RBP9.07□□□□□ -0.96
MRPS28YDR337W MRPL32P25348 183 aa9.07□□□□□ -0.96
MRPS28YDR337W KRE5P22023 1365 aa9.07□□□□□ -0.96
MRPS28YDR337W CHZ1P40019 153 aaPredicted RBP9.03□□□□□ -0.96
MRPS28YDR337W BUD31P25337 157 aaPredicted RBP9.01□□□□□ -0.97
MRPS28YDR337W SCT1P32784 759 aa9.01□□□□□ -0.97
MRPS28YDR337W TY3B-IQ7LHG5 1498 aaKnown RBP9.01□□□□□ -0.97
MRPS28YDR337W PDS5Q04264 1277 aa9□□□□□ -0.97
MRPS28YDR337W DNF3Q12674 1656 aa9□□□□□ -0.97
MRPS28YDR337W YNR029CP53729 429 aaKnown RBP8.99□□□□□ -0.97
MRPS28YDR337W YMR196WQ04336 1088 aa8.99□□□□□ -0.97
MRPS28YDR337W BCK1Q01389 1478 aa8.99□□□□□ -0.97
MRPS28YDR337W HAP1P0CE41 1502 aa8.99□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms