RNA–Protein interactions for RNA: YDR270W

CCC2, Transcript of Cu(+2)-transporting P-type ATPase, yeastyeast

Gene CCC2, Length 3,015 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCC2YDR270W ESC1Q03661 1658 aaKnown RBP9.56□□□□□ -0.88
CCC2YDR270W IRC20Q06554 1556 aa9.55□□□□□ -0.88
CCC2YDR270W RPA190P10964 1664 aaKnown RBP9.55□□□□□ -0.88
CCC2YDR270W PAN1P32521 1480 aa9.55□□□□□ -0.88
CCC2YDR270W TSC11P40061 1430 aa9.55□□□□□ -0.88
CCC2YDR270W YBT1P32386 1661 aa9.54□□□□□ -0.88
CCC2YDR270W NTE1Q04958 1679 aa9.54□□□□□ -0.88
CCC2YDR270W RPO21P04050 1733 aaKnown RBP9.53□□□□□ -0.88
CCC2YDR270W STH1P32597 1359 aa9.52□□□□□ -0.88
CCC2YDR270W TAF7Q05021 590 aa9.51□□□□□ -0.89
CCC2YDR270W GEA1P47102 1408 aaPredicted RBP9.51□□□□□ -0.89
CCC2YDR270W RQC2Q12532 1038 aaKnown RBP9.5□□□□□ -0.89
CCC2YDR270W DNF1P32660 1571 aa9.44□□□□□ -0.9
CCC2YDR270W PDR10P51533 1564 aa9.44□□□□□ -0.9
CCC2YDR270W SAS10Q12136 610 aaPredicted RBP9.42□□□□□ -0.9
CCC2YDR270W GEA2P39993 1459 aaKnown RBP9.42□□□□□ -0.9
CCC2YDR270W SSM4P40318 1319 aa9.39□□□□□ -0.91
CCC2YDR270W CAT8P39113 1433 aa9.38□□□□□ -0.91
CCC2YDR270W PDR12Q02785 1511 aa9.37□□□□□ -0.91
CCC2YDR270W RSE1Q04693 1361 aaKnown RBP9.36□□□□□ -0.91
CCC2YDR270W VPS15P22219 1454 aa9.34□□□□□ -0.91
CCC2YDR270W YRF1-1P0CX20 1796 aa9.33□□□□□ -0.92
CCC2YDR270W YRF1-5P0CX21 1796 aa9.33□□□□□ -0.92
CCC2YDR270W YRF1-8P0CX22 1796 aa9.33□□□□□ -0.92
CCC2YDR270W ARO1P08566 1588 aaKnown RBP9.31□□□□□ -0.92
CCC2YDR270W GDB1Q06625 1536 aa9.31□□□□□ -0.92
CCC2YDR270W SPO14P36126 1683 aa9.29□□□□□ -0.92
CCC2YDR270W GCN2P15442 1659 aa9.28□□□□□ -0.92
CCC2YDR270W NUP159P40477 1460 aa9.27□□□□□ -0.93
CCC2YDR270W PDR5P33302 1511 aaKnown RBP9.25□□□□□ -0.93
CCC2YDR270W IQG1Q12280 1495 aa9.23□□□□□ -0.93
CCC2YDR270W MET5P47169 1442 aa9.21□□□□□ -0.94
CCC2YDR270W SRB8P25648 1427 aa9.19□□□□□ -0.94
CCC2YDR270W IFH1P39520 1085 aa9.18□□□□□ -0.94
CCC2YDR270W YSP2Q06681 1438 aa9.11□□□□□ -0.95
CCC2YDR270W YOR093CQ12275 1648 aa9.11□□□□□ -0.95
CCC2YDR270W BUD3P25558 1636 aa9.1□□□□□ -0.95
CCC2YDR270W CHC1P22137 1653 aaKnown RBP9.09□□□□□ -0.95
CCC2YDR270W MMS1Q06211 1407 aa9.09□□□□□ -0.95
CCC2YDR270W NUP157P40064 1391 aaKnown RBP9.06□□□□□ -0.96
CCC2YDR270W RTT106P40161 455 aa9.06□□□□□ -0.96
CCC2YDR270W DMA1P38823 416 aa9.06□□□□□ -0.96
CCC2YDR270W MET10P39692 1035 aa9.05□□□□□ -0.96
CCC2YDR270W SEC7P11075 2009 aaKnown RBP9.03□□□□□ -0.96
CCC2YDR270W DOP1Q03921 1698 aa9.03□□□□□ -0.96
CCC2YDR270W VMR1P38735 1592 aa8.97□□□□□ -0.97
CCC2YDR270W TY3B-IQ7LHG5 1498 aaKnown RBP8.96□□□□□ -0.98
CCC2YDR270W TRM3Q07527 1436 aa8.96□□□□□ -0.98
CCC2YDR270W NUP188P52593 1655 aaKnown RBP8.95□□□□□ -0.98
CCC2YDR270W LTE1P07866 1435 aa8.91□□□□□ -0.98
CCC2YDR270W NSR1P27476 414 aaKnown RBP RIP-Chip data8.88□□□□□ -0.99not detected
CCC2YDR270W NUP192P47054 1683 aa8.88□□□□□ -0.99
CCC2YDR270W POL5P39985 1022 aaKnown RBP8.88□□□□□ -0.99
CCC2YDR270W DNF2Q12675 1612 aa8.88□□□□□ -0.99
CCC2YDR270W BNR1P40450 1375 aa8.86□□□□□ -0.99
CCC2YDR270W RAV1P47104 1357 aa8.85□□□□□ -0.99
CCC2YDR270W IML1P47170 1584 aa8.85□□□□□ -0.99
CCC2YDR270W PDR11P40550 1411 aa8.85□□□□□ -0.99
CCC2YDR270W CKB1P43639 278 aa8.85□□□□□ -0.99
CCC2YDR270W BUD21Q08492 214 aaPredicted RBP8.84□□□□□ -0.99
CCC2YDR270W SEC3P33332 1336 aaKnown RBP8.84□□□□□ -0.99
CCC2YDR270W HAP1P0CE41 1502 aa8.83□□□□□ -1
CCC2YDR270W BNI1P41832 1953 aa8.83□□□□□ -1
CCC2YDR270W YLR419WQ06698 1435 aaKnown RBP8.81□□□□□ -1
CCC2YDR270W ISW2Q08773 1120 aa8.8□□□□□ -1
CCC2YDR270W RTC1Q08281 1341 aa8.79□□□□□ -1
CCC2YDR270W ENP1P38333 483 aaKnown RBP8.78□□□□□ -1
CCC2YDR270W MHP1P43638 1398 aa8.77□□□□□ -1.01
CCC2YDR270W RPG1P38249 964 aaKnown RBP8.75□□□□□ -1.01
CCC2YDR270W RPL17AP05740 184 aaKnown RBP8.74□□□□□ -1.01
CCC2YDR270W PTP3P40048 928 aa8.74□□□□□ -1.01
CCC2YDR270W RPL17BP46990 184 aaKnown RBP8.74□□□□□ -1.01
CCC2YDR270W NOP7P53261 605 aaKnown RBP8.72□□□□□ -1.01
CCC2YDR270W DRS2P39524 1355 aa8.72□□□□□ -1.01
CCC2YDR270W SPT7P35177 1332 aa8.7□□□□□ -1.02
CCC2YDR270W SPT21P35209 758 aa8.68□□□□□ -1.02
CCC2YDR270W PAF1P38351 445 aa8.67□□□□□ -1.02
CCC2YDR270W RIM101P33400 625 aa8.66□□□□□ -1.02
CCC2YDR270W BCK1Q01389 1478 aa8.64□□□□□ -1.03
CCC2YDR270W NOP2P40991 618 aaKnown RBP8.62□□□□□ -1.03
CCC2YDR270W LEO1P38439 464 aa8.61□□□□□ -1.03
CCC2YDR270W MLP1Q02455 1875 aaKnown RBP8.6□□□□□ -1.03
CCC2YDR270W PRI1P10363 409 aa8.59□□□□□ -1.03
CCC2YDR270W PRS1P32895 427 aaKnown RBP8.59□□□□□ -1.03
CCC2YDR270W DNF3Q12674 1656 aa8.58□□□□□ -1.04
CCC2YDR270W ESL2P36168 1195 aa8.57□□□□□ -1.04
CCC2YDR270W IOC4Q04213 475 aa8.56□□□□□ -1.04
CCC2YDR270W IPL1P38991 367 aa8.53□□□□□ -1.04
CCC2YDR270W SSP1P38871 571 aa8.53□□□□□ -1.04
CCC2YDR270W ITT1Q04638 464 aa8.53□□□□□ -1.04
CCC2YDR270W PSD2P53037 1138 aaKnown RBP8.52□□□□□ -1.05
CCC2YDR270W SCT1P32784 759 aa8.5□□□□□ -1.05
CCC2YDR270W TAF5P38129 798 aa8.5□□□□□ -1.05
CCC2YDR270W PDS5Q04264 1277 aa8.49□□□□□ -1.05
CCC2YDR270W SNF2P22082 1703 aa8.49□□□□□ -1.05
CCC2YDR270W TYS1P36421 394 aaKnown RBP8.48□□□□□ -1.05
CCC2YDR270W URN1Q06525 465 aaKnown RBP8.48□□□□□ -1.05
CCC2YDR270W REB1P21538 810 aa8.48□□□□□ -1.05
CCC2YDR270W YAP3P38749 330 aa8.47□□□□□ -1.05
CCC2YDR270W YML133CQ03099 1374 aa8.47□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms