RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C SOL3P38858 249 aa3.8□□□□□ -1.8
SWI5YDR146C GYP5Q12344 894 aa3.8□□□□□ -1.8
SWI5YDR146C ABP1P15891 592 aaKnown RBP3.79□□□□□ -1.8
SWI5YDR146C SET4P42948 560 aa3.79□□□□□ -1.8
SWI5YDR146C ATH1P48016 1211 aa3.79□□□□□ -1.8
SWI5YDR146C DSF2P38213 736 aa3.77□□□□□ -1.81
SWI5YDR146C REF2P42073 533 aaPredicted RBP3.76□□□□□ -1.81
SWI5YDR146C YGR273CP53329 174 aa3.76□□□□□ -1.81
SWI5YDR146C LDB19Q12502 818 aa3.76□□□□□ -1.81
SWI5YDR146C UBP14P38237 781 aaKnown RBP3.76□□□□□ -1.81
SWI5YDR146C HTA1P04911 132 aaKnown RBP3.75□□□□□ -1.81
SWI5YDR146C HTA2P04912 132 aa3.75□□□□□ -1.81
SWI5YDR146C DCW1P36091 449 aa3.75□□□□□ -1.81
SWI5YDR146C YDR090CQ03193 310 aa3.75□□□□□ -1.81
SWI5YDR146C YLR326WQ06170 240 aaKnown RBP3.75□□□□□ -1.81
SWI5YDR146C IOC2Q12072 812 aa3.75□□□□□ -1.81
SWI5YDR146C TRP5P00931 707 aaKnown RBP3.74□□□□□ -1.81
SWI5YDR146C PBS2P08018 668 aa3.74□□□□□ -1.81
SWI5YDR146C EAP1P36041 632 aaKnown RBP3.74□□□□□ -1.81
SWI5YDR146C ILV3P39522 585 aaKnown RBP3.74□□□□□ -1.81
SWI5YDR146C AI4P03878 556 aa3.73□□□□□ -1.81
SWI5YDR146C MAK21Q12176 1025 aaKnown RBP3.73□□□□□ -1.81
SWI5YDR146C MPH3P0CE00 602 aa3.73□□□□□ -1.81
SWI5YDR146C ULI1P43604 169 aa3.73□□□□□ -1.81
SWI5YDR146C COX6P00427 148 aa3.72□□□□□ -1.81
SWI5YDR146C KEX1P09620 729 aa3.72□□□□□ -1.81
SWI5YDR146C YEL023CP39992 682 aa3.72□□□□□ -1.81
SWI5YDR146C VHR2P40041 505 aa3.72□□□□□ -1.81
SWI5YDR146C DAN4P47179 1161 aa3.72□□□□□ -1.81
SWI5YDR146C SPB4P25808 606 aaPredicted RBP3.7□□□□□ -1.82
SWI5YDR146C PTC4P38089 393 aa3.7□□□□□ -1.82
SWI5YDR146C PCS60P38137 543 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
SWI5YDR146C RGA1P39083 1007 aa3.7□□□□□ -1.82
SWI5YDR146C NUP42P49686 430 aaKnown RBP3.7□□□□□ -1.82
SWI5YDR146C JIP4Q03361 876 aa3.7□□□□□ -1.82
SWI5YDR146C LEO1P38439 464 aa3.7□□□□□ -1.82
SWI5YDR146C MAM3Q12296 706 aa3.7□□□□□ -1.82
SWI5YDR146C IES2P40154 320 aa3.68□□□□□ -1.82
SWI5YDR146C YNL035CP53962 389 aaKnown RBP3.68□□□□□ -1.82
SWI5YDR146C RAD54P32863 898 aa3.68□□□□□ -1.82
SWI5YDR146C SLI15P38283 698 aa3.67□□□□□ -1.82
SWI5YDR146C ORC6P38826 435 aa3.67□□□□□ -1.82
SWI5YDR146C GAP1P19145 602 aaPredicted RBP3.66□□□□□ -1.82
SWI5YDR146C RTG1P32607 177 aa3.66□□□□□ -1.82
SWI5YDR146C SEC61P32915 480 aa3.66□□□□□ -1.82
SWI5YDR146C YNR021WP53723 404 aaKnown RBP3.66□□□□□ -1.82
SWI5YDR146C DIT2P21595 489 aa3.65□□□□□ -1.82
SWI5YDR146C RPN1P38764 993 aaKnown RBP3.65□□□□□ -1.82
SWI5YDR146C PSE1P32337 1089 aaKnown RBP3.63□□□□□ -1.83
SWI5YDR146C KIC1P38692 1080 aa3.63□□□□□ -1.83
SWI5YDR146C AIM7Q12156 149 aa3.63□□□□□ -1.83
SWI5YDR146C BCK2P33306 851 aa3.62□□□□□ -1.83
SWI5YDR146C PML39Q03760 334 aa3.62□□□□□ -1.83
SWI5YDR146C NCR1Q12200 1170 aa3.62□□□□□ -1.83
SWI5YDR146C GLC3P32775 704 aa3.62□□□□□ -1.83
SWI5YDR146C MID1P41821 548 aa3.62□□□□□ -1.83
SWI5YDR146C TFG1P41895 735 aaPredicted RBP3.62□□□□□ -1.83
SWI5YDR146C CDC73Q06697 393 aa3.61□□□□□ -1.83
SWI5YDR146C MPC54Q08550 464 aa3.61□□□□□ -1.83
SWI5YDR146C YDL129WQ07555 291 aa3.61□□□□□ -1.83
SWI5YDR146C RGR1P19263 1082 aa3.6□□□□□ -1.83
SWI5YDR146C MVP1P40959 511 aaKnown RBP3.59□□□□□ -1.83
SWI5YDR146C CSC1Q06538 782 aa3.59□□□□□ -1.83
SWI5YDR146C YDR344CQ05510 147 aa3.59□□□□□ -1.84
SWI5YDR146C DPL1Q05567 589 aa3.59□□□□□ -1.84
SWI5YDR146C KIN1P13185 1064 aa3.58□□□□□ -1.84
SWI5YDR146C TFB4Q12004 338 aa3.58□□□□□ -1.84
SWI5YDR146C PEX29Q03370 554 aa3.57□□□□□ -1.84
SWI5YDR146C ARH1P48360 493 aa3.56□□□□□ -1.84
SWI5YDR146C RPP1BP10622 106 aaKnown RBP3.56□□□□□ -1.84
SWI5YDR146C SAP30P38429 201 aa3.56□□□□□ -1.84
SWI5YDR146C ISU2Q12056 156 aa3.56□□□□□ -1.84
SWI5YDR146C CLB5P30283 435 aa3.55□□□□□ -1.84
SWI5YDR146C NMA111P53920 997 aa3.55□□□□□ -1.84
SWI5YDR146C ATF2P53296 535 aa3.55□□□□□ -1.84
SWI5YDR146C TEA1P47988 759 aa3.54□□□□□ -1.84
SWI5YDR146C HAP5Q02516 242 aa3.54□□□□□ -1.84
SWI5YDR146C YPR109WQ06104 294 aa3.54□□□□□ -1.84
SWI5YDR146C RAM1P22007 431 aa3.53□□□□□ -1.84
SWI5YDR146C CHL1P22516 861 aaPredicted RBP3.53□□□□□ -1.84
SWI5YDR146C NIS1P53939 407 aa3.53□□□□□ -1.84
SWI5YDR146C SIT4P20604 311 aa3.52□□□□□ -1.85
SWI5YDR146C BNI4P53858 892 aa3.52□□□□□ -1.85
SWI5YDR146C TUM1Q08686 304 aaKnown RBP3.52□□□□□ -1.85
SWI5YDR146C YRR1Q12172 810 aa3.52□□□□□ -1.85
SWI5YDR146C GUA1P38625 525 aaKnown RBP3.52□□□□□ -1.85
SWI5YDR146C KTR1P27810 393 aaKnown RBP3.51□□□□□ -1.85
SWI5YDR146C PRE3P38624 215 aa3.51□□□□□ -1.85
SWI5YDR146C PEX21P50091 288 aa3.51□□□□□ -1.85
SWI5YDR146C PDR1P12383 1068 aa3.5□□□□□ -1.85
SWI5YDR146C FPK1P53739 893 aa3.5□□□□□ -1.85
SWI5YDR146C YPR015CQ12531 247 aa3.5□□□□□ -1.85
SWI5YDR146C SPT23P35210 1082 aa3.5□□□□□ -1.85
SWI5YDR146C STR2P47164 639 aa3.5□□□□□ -1.85
SWI5YDR146C HST2P53686 357 aa3.5□□□□□ -1.85
SWI5YDR146C HPC2Q01448 625 aa3.5□□□□□ -1.85
SWI5YDR146C NUD1P32336 851 aa3.49□□□□□ -1.85
SWI5YDR146C YML082WQ04533 649 aaKnown RBP3.49□□□□□ -1.85
SWI5YDR146C ELP4Q02884 456 aaKnown RBP3.49□□□□□ -1.85
SWI5YDR146C TY1A-DR4O74302 440 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms