RNA–Protein interactions for RNA: YDR083W

RRP8, Transcript of Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase, yeastyeast

Gene RRP8, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP8YDR083W RPN1P38764 993 aaKnown RBP8.04□□□□□ -1.12
RRP8YDR083W TAF7Q05021 590 aa8.04□□□□□ -1.12
RRP8YDR083W LDB19Q12502 818 aa8.04□□□□□ -1.12
RRP8YDR083W REF2P42073 533 aaPredicted RBP8.03□□□□□ -1.12
RRP8YDR083W IOC2Q12072 812 aa8.03□□□□□ -1.12
RRP8YDR083W GRE2Q12068 342 aaKnown RBP8.01□□□□□ -1.13
RRP8YDR083W ATH1P48016 1211 aa8□□□□□ -1.13
RRP8YDR083W SAM3Q08986 587 aa8□□□□□ -1.13
RRP8YDR083W BMT6Q12291 365 aa8□□□□□ -1.13
RRP8YDR083W YOL036WQ08206 761 aa7.98□□□□□ -1.13
RRP8YDR083W MAM3Q12296 706 aa7.98□□□□□ -1.13
RRP8YDR083W GUT1P32190 709 aa7.97□□□□□ -1.13
RRP8YDR083W IES2P40154 320 aa7.95□□□□□ -1.14
RRP8YDR083W GYP5Q12344 894 aa7.95□□□□□ -1.14
RRP8YDR083W SET4P42948 560 aa7.94□□□□□ -1.14
RRP8YDR083W MAK21Q12176 1025 aaKnown RBP7.94□□□□□ -1.14
RRP8YDR083W VHR2P40041 505 aa7.93□□□□□ -1.14
RRP8YDR083W COX6P00427 148 aa7.91□□□□□ -1.14
RRP8YDR083W TRP5P00931 707 aaKnown RBP7.91□□□□□ -1.14
RRP8YDR083W ABP1P15891 592 aaKnown RBP7.91□□□□□ -1.14
RRP8YDR083W YNR021WP53723 404 aaKnown RBP7.91□□□□□ -1.14
RRP8YDR083W RTG1P32607 177 aa7.9□□□□□ -1.14
RRP8YDR083W YGR273CP53329 174 aa7.9□□□□□ -1.14
RRP8YDR083W YNL035CP53962 389 aaKnown RBP7.89□□□□□ -1.15
RRP8YDR083W YDR090CQ03193 310 aa7.89□□□□□ -1.15
RRP8YDR083W YLR326WQ06170 240 aaKnown RBP7.89□□□□□ -1.15
RRP8YDR083W SEC61P32915 480 aa7.88□□□□□ -1.15
RRP8YDR083W DCW1P36091 449 aa7.88□□□□□ -1.15
RRP8YDR083W UBP14P38237 781 aaKnown RBP7.88□□□□□ -1.15
RRP8YDR083W NUP42P49686 430 aaKnown RBP7.88□□□□□ -1.15
RRP8YDR083W NCR1Q12200 1170 aa7.88□□□□□ -1.15
RRP8YDR083W GLC3P32775 704 aa7.87□□□□□ -1.15
RRP8YDR083W SOL3P38858 249 aa7.87□□□□□ -1.15
RRP8YDR083W DIT2P21595 489 aa7.85□□□□□ -1.15
RRP8YDR083W TFG1P41895 735 aaPredicted RBP7.85□□□□□ -1.15
RRP8YDR083W HTA1P04911 132 aaKnown RBP7.83□□□□□ -1.16
RRP8YDR083W HTA2P04912 132 aa7.83□□□□□ -1.16
RRP8YDR083W KEX1P09620 729 aa7.83□□□□□ -1.16
RRP8YDR083W KIC1P38692 1080 aa7.83□□□□□ -1.16
RRP8YDR083W NST1P53935 1240 aa7.83□□□□□ -1.16
RRP8YDR083W JIP4Q03361 876 aa7.83□□□□□ -1.16
RRP8YDR083W RAD54P32863 898 aa7.82□□□□□ -1.16
RRP8YDR083W KIN1P13185 1064 aa7.81□□□□□ -1.16
RRP8YDR083W AIM7Q12156 149 aa7.81□□□□□ -1.16
RRP8YDR083W PCS60P38137 543 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
RRP8YDR083W DMA2P53924 522 aa7.79□□□□□ -1.16
RRP8YDR083W ILV3P39522 585 aaKnown RBP7.77□□□□□ -1.17
RRP8YDR083W AI4P03878 556 aa7.76□□□□□ -1.17
RRP8YDR083W MPH3P0CE00 602 aa7.75□□□□□ -1.17
RRP8YDR083W YEL023CP39992 682 aa7.75□□□□□ -1.17
RRP8YDR083W DAN4P47179 1161 aa7.73□□□□□ -1.17
RRP8YDR083W ATF2P53296 535 aa7.73□□□□□ -1.17
RRP8YDR083W PTC4P38089 393 aa7.72□□□□□ -1.17
RRP8YDR083W ORC6P38826 435 aa7.72□□□□□ -1.17
RRP8YDR083W PSE1P32337 1089 aaKnown RBP7.71□□□□□ -1.18
RRP8YDR083W YDL129WQ07555 291 aa7.71□□□□□ -1.18
RRP8YDR083W SLI15P38283 698 aa7.67□□□□□ -1.18
RRP8YDR083W SAP30P38429 201 aa7.67□□□□□ -1.18
RRP8YDR083W RGA1P39083 1007 aa7.66□□□□□ -1.18
RRP8YDR083W CHL1P22516 861 aaPredicted RBP7.64□□□□□ -1.19
RRP8YDR083W GUA1P38625 525 aaKnown RBP7.64□□□□□ -1.19
RRP8YDR083W GAP1P19145 602 aaPredicted RBP7.61□□□□□ -1.19
RRP8YDR083W RPP1BP10622 106 aaKnown RBP7.6□□□□□ -1.19
RRP8YDR083W RGR1P19263 1082 aa7.6□□□□□ -1.19
RRP8YDR083W PRE3P38624 215 aa7.6□□□□□ -1.19
RRP8YDR083W CDC73Q06697 393 aa7.6□□□□□ -1.19
RRP8YDR083W MVP1P40959 511 aaKnown RBP7.59□□□□□ -1.19
RRP8YDR083W TEA1P47988 759 aa7.59□□□□□ -1.19
RRP8YDR083W BCK2P33306 851 aa7.58□□□□□ -1.2
RRP8YDR083W CSC1Q06538 782 aa7.58□□□□□ -1.2
RRP8YDR083W HGH1P48362 394 aaKnown RBP7.57□□□□□ -1.2
RRP8YDR083W HPC2Q01448 625 aa7.57□□□□□ -1.2
RRP8YDR083W CLB5P30283 435 aa7.56□□□□□ -1.2
RRP8YDR083W PML39Q03760 334 aa7.56□□□□□ -1.2
RRP8YDR083W MID1P41821 548 aa7.55□□□□□ -1.2
RRP8YDR083W SSA2P10592 639 aaKnown RBP7.53□□□□□ -1.2
RRP8YDR083W CSN12P47130 423 aa7.53□□□□□ -1.2
RRP8YDR083W TFB3Q03290 321 aa7.53□□□□□ -1.2
RRP8YDR083W TFB4Q12004 338 aa7.53□□□□□ -1.2
RRP8YDR083W PEX21P50091 288 aa7.52□□□□□ -1.21
RRP8YDR083W DPL1Q05567 589 aa7.52□□□□□ -1.21
RRP8YDR083W MPC54Q08550 464 aa7.52□□□□□ -1.21
RRP8YDR083W YPR109WQ06104 294 aa7.51□□□□□ -1.21
RRP8YDR083W BRL1P38770 471 aa7.5□□□□□ -1.21
RRP8YDR083W NIS1P53939 407 aa7.5□□□□□ -1.21
RRP8YDR083W PEX29Q03370 554 aa7.5□□□□□ -1.21
RRP8YDR083W RLF2Q12495 606 aa7.5□□□□□ -1.21
RRP8YDR083W KTR1P27810 393 aaKnown RBP7.49□□□□□ -1.21
RRP8YDR083W ELP4Q02884 456 aaKnown RBP7.48□□□□□ -1.21
RRP8YDR083W TUM1Q08686 304 aaKnown RBP7.48□□□□□ -1.21
RRP8YDR083W TYW1Q08960 810 aaKnown RBP7.48□□□□□ -1.21
RRP8YDR083W FPK1P53739 893 aa7.47□□□□□ -1.21
RRP8YDR083W YMR196WQ04336 1088 aa7.47□□□□□ -1.21
RRP8YDR083W PKC1P24583 1151 aa7.45□□□□□ -1.22
RRP8YDR083W HST2P53686 357 aa7.45□□□□□ -1.22
RRP8YDR083W YRR1Q12172 810 aa7.45□□□□□ -1.22
RRP8YDR083W GLN1P32288 370 aaKnown RBP7.44□□□□□ -1.22
RRP8YDR083W ARH1P48360 493 aa7.44□□□□□ -1.22
RRP8YDR083W ISU2Q12056 156 aa7.44□□□□□ -1.22
RRP8YDR083W XDJ1P39102 459 aa7.42□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms