RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W PDR15Q04182 1529 aaKnown RBP14.33□□□□□ -0.12
SED1YDR077W NTE1Q04958 1679 aa14.32□□□□□ -0.12
SED1YDR077W ULS1Q08562 1619 aa14.3□□□□□ -0.12
SED1YDR077W RPO21P04050 1733 aaKnown RBP14.24□□□□□ -0.13
SED1YDR077W SNT2P53127 1403 aa14.23□□□□□ -0.13
SED1YDR077W NUP159P40477 1460 aa14.17□□□□□ -0.14
SED1YDR077W GEA1P47102 1408 aaPredicted RBP14.16□□□□□ -0.14
SED1YDR077W MET5P47169 1442 aa14.15□□□□□ -0.14
SED1YDR077W GEA2P39993 1459 aaKnown RBP14.14□□□□□ -0.15
SED1YDR077W IFH1P39520 1085 aa14.12□□□□□ -0.15
SED1YDR077W RTT106P40161 455 aa14.08□□□□□ -0.16
SED1YDR077W IRC20Q06554 1556 aa14.07□□□□□ -0.16
SED1YDR077W TY3B-GQ99315 1547 aa14.03□□□□□ -0.16
SED1YDR077W YRF1-1P0CX20 1796 aa14.02□□□□□ -0.16
SED1YDR077W YRF1-5P0CX21 1796 aa14.02□□□□□ -0.16
SED1YDR077W YRF1-8P0CX22 1796 aa14.02□□□□□ -0.16
SED1YDR077W IKI3Q06706 1349 aaKnown RBP14.02□□□□□ -0.17
SED1YDR077W YBT1P32386 1661 aa14□□□□□ -0.17
SED1YDR077W NUP170P38181 1502 aa13.99□□□□□ -0.17
SED1YDR077W VPS15P22219 1454 aa13.99□□□□□ -0.17
SED1YDR077W PDR12Q02785 1511 aa13.98□□□□□ -0.17
SED1YDR077W CAT8P39113 1433 aa13.98□□□□□ -0.17
SED1YDR077W SPO14P36126 1683 aa13.95□□□□□ -0.18
SED1YDR077W FAP1P53971 965 aa13.94□□□□□ -0.18
SED1YDR077W GDB1Q06625 1536 aa13.93□□□□□ -0.18
SED1YDR077W MET10P39692 1035 aa13.9□□□□□ -0.18
SED1YDR077W PDR10P51533 1564 aa13.89□□□□□ -0.19
SED1YDR077W LTE1P07866 1435 aa13.86□□□□□ -0.19
SED1YDR077W NUP157P40064 1391 aaKnown RBP13.85□□□□□ -0.19
SED1YDR077W ARO1P08566 1588 aaKnown RBP13.83□□□□□ -0.19
SED1YDR077W SSM4P40318 1319 aa13.8□□□□□ -0.2
SED1YDR077W IQG1Q12280 1495 aa13.76□□□□□ -0.21
SED1YDR077W BUD3P25558 1636 aa13.75□□□□□ -0.21
SED1YDR077W SRB8P25648 1427 aa13.74□□□□□ -0.21
SED1YDR077W CKB1P43639 278 aa13.69□□□□□ -0.22
SED1YDR077W DRS2P39524 1355 aa13.67□□□□□ -0.22
SED1YDR077W DOP1Q03921 1698 aa13.64□□□□□ -0.23
SED1YDR077W TRM3Q07527 1436 aa13.64□□□□□ -0.23
SED1YDR077W YSP2Q06681 1438 aa13.63□□□□□ -0.23
SED1YDR077W MMS1Q06211 1407 aa13.62□□□□□ -0.23
SED1YDR077W CHC1P22137 1653 aaKnown RBP13.58□□□□□ -0.24
SED1YDR077W SEC7P11075 2009 aaKnown RBP13.54□□□□□ -0.24
SED1YDR077W GCN2P15442 1659 aa13.54□□□□□ -0.24
SED1YDR077W BNI1P41832 1953 aa13.54□□□□□ -0.24
SED1YDR077W BNR1P40450 1375 aa13.53□□□□□ -0.24
SED1YDR077W BUD21Q08492 214 aaPredicted RBP13.52□□□□□ -0.25
SED1YDR077W ITT1Q04638 464 aa13.47□□□□□ -0.25
SED1YDR077W YOR093CQ12275 1648 aa13.42□□□□□ -0.26
SED1YDR077W PDR5P33302 1511 aaKnown RBP13.36□□□□□ -0.27
SED1YDR077W DNF2Q12675 1612 aa13.35□□□□□ -0.27
SED1YDR077W NUP188P52593 1655 aaKnown RBP13.32□□□□□ -0.28
SED1YDR077W VMR1P38735 1592 aa13.3□□□□□ -0.28
SED1YDR077W NOP7P53261 605 aaKnown RBP13.27□□□□□ -0.29
SED1YDR077W IML1P47170 1584 aa13.27□□□□□ -0.29
SED1YDR077W PAF1P38351 445 aa13.26□□□□□ -0.29
SED1YDR077W URN1Q06525 465 aaKnown RBP13.18□□□□□ -0.3
SED1YDR077W BFR2Q06631 534 aaKnown RBP13.17□□□□□ -0.3
SED1YDR077W RAV1P47104 1357 aa13.16□□□□□ -0.3
SED1YDR077W PDR11P40550 1411 aa13.13□□□□□ -0.31
SED1YDR077W PRY3P47033 881 aa13.12□□□□□ -0.31
SED1YDR077W RTC1Q08281 1341 aa13.09□□□□□ -0.31
SED1YDR077W DNF3Q12674 1656 aa13.08□□□□□ -0.31
SED1YDR077W YAP3P38749 330 aa13.08□□□□□ -0.32
SED1YDR077W IPL1P38991 367 aa13.07□□□□□ -0.32
SED1YDR077W POL5P39985 1022 aaKnown RBP13.07□□□□□ -0.32
SED1YDR077W HAP1P0CE41 1502 aa13.06□□□□□ -0.32
SED1YDR077W TYS1P36421 394 aaKnown RBP13.02□□□□□ -0.33
SED1YDR077W ABP1P15891 592 aaKnown RBP13□□□□□ -0.33
SED1YDR077W NUP192P47054 1683 aa12.99□□□□□ -0.33
SED1YDR077W TY3B-IQ7LHG5 1498 aaKnown RBP12.97□□□□□ -0.33
SED1YDR077W ESL2P36168 1195 aa12.93□□□□□ -0.34
SED1YDR077W PRI1P10363 409 aa12.92□□□□□ -0.34
SED1YDR077W TAF5P38129 798 aa12.91□□□□□ -0.34
SED1YDR077W AAD16Q02895 342 aa12.88□□□□□ -0.35
SED1YDR077W BCK1Q01389 1478 aa12.88□□□□□ -0.35
SED1YDR077W YLR419WQ06698 1435 aaKnown RBP12.85□□□□□ -0.35
SED1YDR077W MHP1P43638 1398 aa12.84□□□□□ -0.35
SED1YDR077W MAK10Q02197 733 aa12.83□□□□□ -0.36
SED1YDR077W ORC1P54784 914 aaPredicted RBP12.82□□□□□ -0.36
SED1YDR077W RAD9P14737 1309 aa12.82□□□□□ -0.36
SED1YDR077W SCT1P32784 759 aa12.81□□□□□ -0.36
SED1YDR077W KIP3P53086 805 aaKnown RBP12.81□□□□□ -0.36
SED1YDR077W ALD4P46367 519 aaKnown RBP12.8□□□□□ -0.36
SED1YDR077W SEC3P33332 1336 aaKnown RBP12.8□□□□□ -0.36
SED1YDR077W NAP1P25293 417 aaKnown RBP12.79□□□□□ -0.36
SED1YDR077W MRX12P47084 519 aa12.77□□□□□ -0.37
SED1YDR077W CAB1Q04430 367 aa12.77□□□□□ -0.37
SED1YDR077W TY1B-NL2Q99337 1749 aaKnown RBP12.76□□□□□ -0.37
SED1YDR077W KRE5P22023 1365 aa12.76□□□□□ -0.37
SED1YDR077W SPE2P21182 396 aa12.75□□□□□ -0.37
SED1YDR077W TAF8Q03750 510 aa12.75□□□□□ -0.37
SED1YDR077W USO1P25386 1790 aa12.73□□□□□ -0.37
SED1YDR077W CFT1Q06632 1357 aaKnown RBP12.72□□□□□ -0.37
SED1YDR077W RIA1P53893 1110 aa12.7□□□□□ -0.38
SED1YDR077W SPT7P35177 1332 aa12.66□□□□□ -0.38
SED1YDR077W MIF2P35201 549 aa12.64□□□□□ -0.39
SED1YDR077W PDS5Q04264 1277 aa12.64□□□□□ -0.39
SED1YDR077W MLP1Q02455 1875 aaKnown RBP12.61□□□□□ -0.39
SED1YDR077W ENP1P38333 483 aaKnown RBP12.59□□□□□ -0.39
SED1YDR077W CHZ1P40019 153 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms