RNA–Protein interactions for RNA: YDL130W

RPP1B, Transcript of Ribosomal protein P1 beta, yeastyeast

Gene RPP1B, Length 321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP1BYDL130W YRF1-1P0CX20 1796 aa24.73■■□□□ 1.55
RPP1BYDL130W YRF1-5P0CX21 1796 aa24.73■■□□□ 1.55
RPP1BYDL130W YRF1-8P0CX22 1796 aa24.73■■□□□ 1.55
RPP1BYDL130W RPO21P04050 1733 aaKnown RBP24.71■■□□□ 1.55
RPP1BYDL130W VPS15P22219 1454 aa24.67■■□□□ 1.54
RPP1BYDL130W STH1P32597 1359 aa24.66■■□□□ 1.54
RPP1BYDL130W SNQ2P32568 1501 aaKnown RBP24.66■■□□□ 1.54
RPP1BYDL130W SNT2P53127 1403 aa24.56■■□□□ 1.52
RPP1BYDL130W ITT1Q04638 464 aa24.55■■□□□ 1.52
RPP1BYDL130W BNI1P41832 1953 aa24.54■■□□□ 1.52
RPP1BYDL130W RTT106P40161 455 aa24.45■■□□□ 1.5
RPP1BYDL130W SAS10Q12136 610 aaPredicted RBP24.45■■□□□ 1.5
RPP1BYDL130W DRS2P39524 1355 aa24.44■■□□□ 1.5
RPP1BYDL130W MET10P39692 1035 aa24.41■■□□□ 1.5
RPP1BYDL130W MLP2P40457 1679 aa24.34■■□□□ 1.49
RPP1BYDL130W ULS1Q08562 1619 aa24.31■■□□□ 1.48
RPP1BYDL130W PDR15Q04182 1529 aaKnown RBP24.29■■□□□ 1.48
RPP1BYDL130W MMS1Q06211 1407 aa24.28■■□□□ 1.48
RPP1BYDL130W TAF7Q05021 590 aa24.28■■□□□ 1.48
RPP1BYDL130W SPO14P36126 1683 aa24.25■■□□□ 1.47
RPP1BYDL130W PDR12Q02785 1511 aa24.24■■□□□ 1.47
RPP1BYDL130W NUP170P38181 1502 aa24.23■■□□□ 1.47
RPP1BYDL130W IRC20Q06554 1556 aa24.11■■□□□ 1.45
RPP1BYDL130W GDB1Q06625 1536 aa24.1■■□□□ 1.45
RPP1BYDL130W IFH1P39520 1085 aa24.1■■□□□ 1.45
RPP1BYDL130W NUP157P40064 1391 aaKnown RBP24.09■■□□□ 1.45
RPP1BYDL130W ABP1P15891 592 aaKnown RBP24.06■■□□□ 1.44
RPP1BYDL130W MIF2P35201 549 aa24.06■■□□□ 1.44
RPP1BYDL130W IQG1Q12280 1495 aa24.02■■□□□ 1.44
RPP1BYDL130W GEA1P47102 1408 aaPredicted RBP23.93■■□□□ 1.42
RPP1BYDL130W PDR10P51533 1564 aa23.91■■□□□ 1.42
RPP1BYDL130W BUD3P25558 1636 aa23.88■■□□□ 1.41
RPP1BYDL130W TRM3Q07527 1436 aa23.88■■□□□ 1.41
RPP1BYDL130W DNF2Q12675 1612 aa23.86■■□□□ 1.41
RPP1BYDL130W DOP1Q03921 1698 aa23.85■■□□□ 1.41
RPP1BYDL130W CAT8P39113 1433 aa23.83■■□□□ 1.4
RPP1BYDL130W TY3B-GQ99315 1547 aa23.75■■□□□ 1.39
RPP1BYDL130W YBT1P32386 1661 aa23.69■■□□□ 1.38
RPP1BYDL130W CKB1P43639 278 aa23.61■■□□□ 1.37
RPP1BYDL130W ARO1P08566 1588 aaKnown RBP23.59■■□□□ 1.37
RPP1BYDL130W CHC1P22137 1653 aaKnown RBP23.55■■□□□ 1.36
RPP1BYDL130W YSP2Q06681 1438 aa23.51■■□□□ 1.35
RPP1BYDL130W BNR1P40450 1375 aa23.44■■□□□ 1.34
RPP1BYDL130W SEC7P11075 2009 aaKnown RBP23.43■■□□□ 1.34
RPP1BYDL130W YOR093CQ12275 1648 aa23.33■■□□□ 1.32
RPP1BYDL130W SRB8P25648 1427 aa23.33■■□□□ 1.32
RPP1BYDL130W YFR006WP43590 535 aa23.31■■□□□ 1.32
RPP1BYDL130W YAP3P38749 330 aa23.18■■□□□ 1.3
RPP1BYDL130W BUD21Q08492 214 aaPredicted RBP23.13■■□□□ 1.29
RPP1BYDL130W DNF3Q12674 1656 aa23.13■■□□□ 1.29
RPP1BYDL130W IKI3Q06706 1349 aaKnown RBP23.12■■□□□ 1.29
RPP1BYDL130W URN1Q06525 465 aaKnown RBP23.1■■□□□ 1.29
RPP1BYDL130W MAK10Q02197 733 aa22.89■■□□□ 1.25
RPP1BYDL130W SSM4P40318 1319 aa22.88■■□□□ 1.25
RPP1BYDL130W IPL1P38991 367 aa22.84■■□□□ 1.25
RPP1BYDL130W NUP188P52593 1655 aaKnown RBP22.83■■□□□ 1.24
RPP1BYDL130W VMR1P38735 1592 aa22.74■■□□□ 1.23
RPP1BYDL130W TYS1P36421 394 aaKnown RBP22.72■■□□□ 1.23
RPP1BYDL130W HAP1P0CE41 1502 aa22.67■■□□□ 1.22
RPP1BYDL130W IML1P47170 1584 aa22.66■■□□□ 1.22
RPP1BYDL130W PDR5P33302 1511 aaKnown RBP22.61■■□□□ 1.21
RPP1BYDL130W GCN2P15442 1659 aa22.56■■□□□ 1.2
RPP1BYDL130W USO1P25386 1790 aa22.52■■□□□ 1.2
RPP1BYDL130W PDR11P40550 1411 aa22.44■■□□□ 1.18
RPP1BYDL130W YMR196WQ04336 1088 aa22.4■■□□□ 1.18
RPP1BYDL130W TY1B-NL2Q99337 1749 aaKnown RBP22.39■■□□□ 1.17
RPP1BYDL130W PAF1P38351 445 aa22.33■■□□□ 1.17
RPP1BYDL130W THI12P42883 340 aa22.31■■□□□ 1.16
RPP1BYDL130W THI5P43534 340 aa22.31■■□□□ 1.16
RPP1BYDL130W THI11P47183 340 aa22.31■■□□□ 1.16
RPP1BYDL130W THI13Q07748 340 aa22.31■■□□□ 1.16
RPP1BYDL130W RAV1P47104 1357 aa22.24■■□□□ 1.15
RPP1BYDL130W BFR2Q06631 534 aaKnown RBP22.18■■□□□ 1.14
RPP1BYDL130W MRX12P47084 519 aa22.17■■□□□ 1.14
RPP1BYDL130W KRE5P22023 1365 aa22.16■■□□□ 1.14
RPP1BYDL130W NOP7P53261 605 aaKnown RBP22.13■■□□□ 1.13
RPP1BYDL130W RIA1P53893 1110 aa22.12■■□□□ 1.13
RPP1BYDL130W RTC1Q08281 1341 aa22.1■■□□□ 1.13
RPP1BYDL130W CFT1Q06632 1357 aaKnown RBP22.09■■□□□ 1.13
RPP1BYDL130W BCK1Q01389 1478 aa22.09■■□□□ 1.13
RPP1BYDL130W ALD4P46367 519 aaKnown RBP21.99■■□□□ 1.11
RPP1BYDL130W CAB1Q04430 367 aa21.99■■□□□ 1.11
RPP1BYDL130W RAD9P14737 1309 aa21.98■■□□□ 1.11
RPP1BYDL130W YNR029CP53729 429 aaKnown RBP21.97■■□□□ 1.11
RPP1BYDL130W NUP192P47054 1683 aa21.95■■□□□ 1.1
RPP1BYDL130W ESL2P36168 1195 aa21.8■■□□□ 1.08
RPP1BYDL130W NAP1P25293 417 aaKnown RBP21.77■■□□□ 1.08
RPP1BYDL130W TAF5P38129 798 aa21.77■■□□□ 1.08
RPP1BYDL130W PTP3P40048 928 aa21.73■■□□□ 1.07
RPP1BYDL130W TAF8Q03750 510 aa21.71■■□□□ 1.07
RPP1BYDL130W TY3B-IQ7LHG5 1498 aaKnown RBP21.7■■□□□ 1.06
RPP1BYDL130W YAH1Q12184 172 aaKnown RBP21.69■■□□□ 1.06
RPP1BYDL130W APP1P53933 587 aa21.58■■□□□ 1.05
RPP1BYDL130W RCM1P53972 490 aa21.55■■□□□ 1.04
RPP1BYDL130W CPS1P27614 576 aa21.53■■□□□ 1.04
RPP1BYDL130W KIP3P53086 805 aaKnown RBP21.49■■□□□ 1.03
RPP1BYDL130W SPE2P21182 396 aa21.47■■□□□ 1.03
RPP1BYDL130W REB1P21538 810 aa21.47■■□□□ 1.03
RPP1BYDL130W PPH3P32345 308 aa21.44■■□□□ 1.02
RPP1BYDL130W ENT1Q12518 454 aa21.43■■□□□ 1.02
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms