RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W YAP5P40574 245 aa3.17□□□□□ -1.9
TRM3YDL112W YPK9Q12697 1472 aa3.17□□□□□ -1.9
TRM3YDL112W TY1B-BRQ12193 1756 aa3.15□□□□□ -1.91
TRM3YDL112W TY1B-GR3Q12316 1755 aa3.15□□□□□ -1.91
TRM3YDL112W TY1B-ORQ92393 1755 aa3.15□□□□□ -1.91
TRM3YDL112W RPO31P04051 1460 aa3.15□□□□□ -1.91
TRM3YDL112W MET5P47169 1442 aa3.15□□□□□ -1.91
TRM3YDL112W EDS1P38073 919 aa3.15□□□□□ -1.91
TRM3YDL112W SCC2Q04002 1493 aa3.14□□□□□ -1.91
TRM3YDL112W TY2B-LR1P0C2J3 1770 aa3.14□□□□□ -1.91
TRM3YDL112W TY2B-FP0CX63 1770 aa3.14□□□□□ -1.91
TRM3YDL112W TY2B-GR2P0CX64 1770 aa3.14□□□□□ -1.91
TRM3YDL112W TY2B-CP25384 1770 aa3.14□□□□□ -1.91
TRM3YDL112W TY2B-DR2Q03494 1770 aa3.14□□□□□ -1.91
TRM3YDL112W TY1B-DR1Q03855 1755 aa3.14□□□□□ -1.91
TRM3YDL112W TY2B-DR3Q07791 1770 aaKnown RBP3.14□□□□□ -1.91
TRM3YDL112W TY2B-OR1Q12113 1770 aa3.14□□□□□ -1.91
TRM3YDL112W TY2B-DR1Q12472 1770 aa3.14□□□□□ -1.91
TRM3YDL112W TY2B-OR2Q12501 1770 aa3.14□□□□□ -1.91
TRM3YDL112W YBL029C-AQ3E756 94 aa3.14□□□□□ -1.91
TRM3YDL112W CDC25P04821 1589 aa3.13□□□□□ -1.91
TRM3YDL112W MAK11P20484 414 aaKnown RBP3.13□□□□□ -1.91
TRM3YDL112W GYP5Q12344 894 aa3.12□□□□□ -1.91
TRM3YDL112W KIC1P38692 1080 aa3.12□□□□□ -1.91
TRM3YDL112W GRE2Q12068 342 aaKnown RBP3.12□□□□□ -1.91
TRM3YDL112W TY1B-HO13535 1793 aa3.12□□□□□ -1.91
TRM3YDL112W TY1B-DR5P0C2I2 1755 aa3.12□□□□□ -1.91
TRM3YDL112W TY1B-DR6P0C2I3 1755 aa3.12□□□□□ -1.91
TRM3YDL112W TY1B-LR2P0C2I5 1755 aa3.12□□□□□ -1.91
TRM3YDL112W TY1B-LR3P0C2I6 1755 aaKnown RBP3.12□□□□□ -1.91
TRM3YDL112W TY1B-PR1P0C2I9 1755 aaKnown RBP3.12□□□□□ -1.91
TRM3YDL112W TY1B-PR2P0C2J0 1756 aa3.12□□□□□ -1.91
TRM3YDL112W TY1B-PR3P0C2J1 1755 aaKnown RBP3.12□□□□□ -1.91
TRM3YDL112W TY1B-JR1P47098 1755 aa3.12□□□□□ -1.91
TRM3YDL112W TY1B-ML2Q03434 1755 aaKnown RBP3.12□□□□□ -1.91
TRM3YDL112W TY1B-ER1Q03612 1755 aa3.12□□□□□ -1.91
TRM3YDL112W TY1B-ML1Q04711 1755 aaKnown RBP3.12□□□□□ -1.91
TRM3YDL112W TY1B-GR2Q12269 1755 aa3.12□□□□□ -1.91
TRM3YDL112W TY1B-OLQ12273 1755 aa3.12□□□□□ -1.91
TRM3YDL112W TY1B-PLQ12414 1755 aaKnown RBP3.12□□□□□ -1.91
TRM3YDL112W ESC1Q03661 1658 aaKnown RBP3.11□□□□□ -1.91
TRM3YDL112W VMA1P17255 1071 aaKnown RBP3.11□□□□□ -1.91
TRM3YDL112W RPA190P10964 1664 aaKnown RBP3.11□□□□□ -1.91
TRM3YDL112W PTC3P34221 468 aaKnown RBP3.11□□□□□ -1.91
TRM3YDL112W RKR1Q04781 1562 aa3.11□□□□□ -1.91
TRM3YDL112W GLC3P32775 704 aa3.11□□□□□ -1.91
TRM3YDL112W UFD4P33202 1483 aa3.11□□□□□ -1.91
TRM3YDL112W LTE1P07866 1435 aa3.1□□□□□ -1.91
TRM3YDL112W TY2B-BQ12491 1770 aa3.1□□□□□ -1.91
TRM3YDL112W IES2P40154 320 aa3.1□□□□□ -1.91
TRM3YDL112W SKI3P17883 1432 aaKnown RBP3.1□□□□□ -1.91
TRM3YDL112W CHD1P32657 1468 aa3.1□□□□□ -1.91
TRM3YDL112W TY1B-DR3Q99231 1755 aa3.1□□□□□ -1.91
TRM3YDL112W PBS2P08018 668 aa3.09□□□□□ -1.92
TRM3YDL112W ATF2P53296 535 aa3.09□□□□□ -1.92
TRM3YDL112W PEX29Q03370 554 aa3.09□□□□□ -1.92
TRM3YDL112W BNI1P41832 1953 aa3.08□□□□□ -1.92
TRM3YDL112W DNF1P32660 1571 aa3.08□□□□□ -1.92
TRM3YDL112W PAN1P32521 1480 aa3.08□□□□□ -1.92
TRM3YDL112W SPP1Q03012 353 aa3.08□□□□□ -1.92
TRM3YDL112W DMA2P53924 522 aa3.07□□□□□ -1.92
TRM3YDL112W YOL036WQ08206 761 aa3.07□□□□□ -1.92
TRM3YDL112W TOP2P06786 1428 aaKnown RBP3.07□□□□□ -1.92
TRM3YDL112W TAF2P23255 1407 aa3.07□□□□□ -1.92
TRM3YDL112W TGL3P40308 642 aa3.07□□□□□ -1.92
TRM3YDL112W MAM3Q12296 706 aa3.06□□□□□ -1.92
TRM3YDL112W RAD54P32863 898 aa3.05□□□□□ -1.92
TRM3YDL112W REF2P42073 533 aaPredicted RBP3.05□□□□□ -1.92
TRM3YDL112W ULI1P43604 169 aa3.05□□□□□ -1.92
TRM3YDL112W TY1B-JR2P47100 1755 aaKnown RBP3.04□□□□□ -1.92
TRM3YDL112W TY1B-ER2Q03619 1755 aa3.04□□□□□ -1.92
TRM3YDL112W TY1B-MR1Q04214 1755 aa3.04□□□□□ -1.92
TRM3YDL112W TY1B-MR2Q04670 1755 aaKnown RBP3.04□□□□□ -1.92
TRM3YDL112W TY1B-LR1Q12088 1755 aaKnown RBP3.04□□□□□ -1.92
TRM3YDL112W TY1B-NL1Q12112 1755 aa3.04□□□□□ -1.92
TRM3YDL112W TY1B-GR1Q12141 1755 aa3.04□□□□□ -1.92
TRM3YDL112W TY1B-BLQ12490 1755 aa3.04□□□□□ -1.92
TRM3YDL112W POL1P13382 1468 aa3.04□□□□□ -1.92
TRM3YDL112W YRF1-1P0CX20 1796 aa3.04□□□□□ -1.92
TRM3YDL112W YRF1-5P0CX21 1796 aa3.04□□□□□ -1.92
TRM3YDL112W YRF1-8P0CX22 1796 aa3.04□□□□□ -1.92
TRM3YDL112W SMC4Q12267 1418 aa3.04□□□□□ -1.92
TRM3YDL112W GEA2P39993 1459 aaKnown RBP3.03□□□□□ -1.92
TRM3YDL112W NTE1Q04958 1679 aa3.03□□□□□ -1.92
TRM3YDL112W CKB1P43639 278 aa3.03□□□□□ -1.92
TRM3YDL112W IRC20Q06554 1556 aa3.03□□□□□ -1.92
TRM3YDL112W RPO21P04050 1733 aaKnown RBP3.03□□□□□ -1.92
TRM3YDL112W HTA1P04911 132 aaKnown RBP3.03□□□□□ -1.92
TRM3YDL112W HTA2P04912 132 aa3.03□□□□□ -1.92
TRM3YDL112W DIT2P21595 489 aa3.03□□□□□ -1.92
TRM3YDL112W UBP9P39967 754 aa3.03□□□□□ -1.92
TRM3YDL112W MMS22Q06164 1454 aa3.02□□□□□ -1.93
TRM3YDL112W TFG1P41895 735 aaPredicted RBP3.02□□□□□ -1.93
TRM3YDL112W PEX21P50091 288 aa3.02□□□□□ -1.93
TRM3YDL112W IFH1P39520 1085 aa3.02□□□□□ -1.93
TRM3YDL112W YOR1P53049 1477 aa3.02□□□□□ -1.93
TRM3YDL112W YMR196WQ04336 1088 aa3.02□□□□□ -1.93
TRM3YDL112W SIS1P25294 352 aaKnown RBP3.01□□□□□ -1.93
TRM3YDL112W GUT1P32190 709 aa3.01□□□□□ -1.93
TRM3YDL112W MID1P41821 548 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms