RNA–Protein interactions for RNA: YCR012W

PGK1, Transcript of 3-phosphoglycerate kinase, yeastyeast

Gene PGK1, Length 1,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGK1YCR012W TY1B-OLQ12273 1755 aa8.37□□□□□ -1.07
PGK1YCR012W TY1B-PLQ12414 1755 aaKnown RBP8.37□□□□□ -1.07
PGK1YCR012W NSR1P27476 414 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
PGK1YCR012W RPA190P10964 1664 aaKnown RBP8.35□□□□□ -1.07
PGK1YCR012W TY1B-BRQ12193 1756 aa8.35□□□□□ -1.07
PGK1YCR012W TY1B-GR3Q12316 1755 aa8.35□□□□□ -1.07
PGK1YCR012W TY1B-ORQ92393 1755 aa8.35□□□□□ -1.07
PGK1YCR012W SNT2P53127 1403 aa8.33□□□□□ -1.08
PGK1YCR012W TY3B-GQ99315 1547 aa8.33□□□□□ -1.08
PGK1YCR012W MMS1Q06211 1407 aa8.32□□□□□ -1.08
PGK1YCR012W POL5P39985 1022 aaKnown RBP8.32□□□□□ -1.08
PGK1YCR012W DRS2P39524 1355 aa8.32□□□□□ -1.08
PGK1YCR012W NOP2P40991 618 aaKnown RBP8.3□□□□□ -1.08
PGK1YCR012W VPS15P22219 1454 aa8.3□□□□□ -1.08
PGK1YCR012W BNI1P41832 1953 aa8.3□□□□□ -1.08
PGK1YCR012W RTT106P40161 455 aa8.28□□□□□ -1.08
PGK1YCR012W CAT8P39113 1433 aa8.25□□□□□ -1.09
PGK1YCR012W NUP159P40477 1460 aa8.25□□□□□ -1.09
PGK1YCR012W TY1B-JR2P47100 1755 aaKnown RBP8.25□□□□□ -1.09
PGK1YCR012W TY1B-ER2Q03619 1755 aa8.25□□□□□ -1.09
PGK1YCR012W TY1B-MR1Q04214 1755 aa8.25□□□□□ -1.09
PGK1YCR012W TY1B-MR2Q04670 1755 aaKnown RBP8.25□□□□□ -1.09
PGK1YCR012W TY1B-LR1Q12088 1755 aaKnown RBP8.25□□□□□ -1.09
PGK1YCR012W TY1B-NL1Q12112 1755 aa8.25□□□□□ -1.09
PGK1YCR012W TY1B-GR1Q12141 1755 aa8.25□□□□□ -1.09
PGK1YCR012W TY1B-BLQ12490 1755 aa8.25□□□□□ -1.09
PGK1YCR012W YBT1P32386 1661 aa8.24□□□□□ -1.09
PGK1YCR012W ENP1P38333 483 aaKnown RBP8.22□□□□□ -1.09
PGK1YCR012W IRC20Q06554 1556 aa8.22□□□□□ -1.09
PGK1YCR012W SRB8P25648 1427 aa8.19□□□□□ -1.1
PGK1YCR012W SEC3P33332 1336 aaKnown RBP8.18□□□□□ -1.1
PGK1YCR012W NTE1Q04958 1679 aa8.18□□□□□ -1.1
PGK1YCR012W RPO21P04050 1733 aaKnown RBP8.16□□□□□ -1.1
PGK1YCR012W MET10P39692 1035 aa8.16□□□□□ -1.1
PGK1YCR012W GDB1Q06625 1536 aa8.14□□□□□ -1.11
PGK1YCR012W SPT7P35177 1332 aa8.13□□□□□ -1.11
PGK1YCR012W CKB1P43639 278 aa8.13□□□□□ -1.11
PGK1YCR012W ARO1P08566 1588 aaKnown RBP8.13□□□□□ -1.11
PGK1YCR012W PDR10P51533 1564 aa8.13□□□□□ -1.11
PGK1YCR012W GCN2P15442 1659 aa8.12□□□□□ -1.11
PGK1YCR012W YRF1-1P0CX20 1796 aa8.1□□□□□ -1.11
PGK1YCR012W YRF1-5P0CX21 1796 aa8.1□□□□□ -1.11
PGK1YCR012W YRF1-8P0CX22 1796 aa8.1□□□□□ -1.11
PGK1YCR012W NOP7P53261 605 aaKnown RBP8.1□□□□□ -1.11
PGK1YCR012W BUD21Q08492 214 aaPredicted RBP8.09□□□□□ -1.11
PGK1YCR012W PDR12Q02785 1511 aa8.07□□□□□ -1.12
PGK1YCR012W NUP157P40064 1391 aaKnown RBP8.06□□□□□ -1.12
PGK1YCR012W SPO14P36126 1683 aa8.03□□□□□ -1.12
PGK1YCR012W PAF1P38351 445 aa8.02□□□□□ -1.13
PGK1YCR012W PDR5P33302 1511 aaKnown RBP8.02□□□□□ -1.13
PGK1YCR012W IQG1Q12280 1495 aa8.01□□□□□ -1.13
PGK1YCR012W BUD3P25558 1636 aa8.01□□□□□ -1.13
PGK1YCR012W YSP2Q06681 1438 aa8.01□□□□□ -1.13
PGK1YCR012W DNF2Q12675 1612 aa8□□□□□ -1.13
PGK1YCR012W MHP1P43638 1398 aa8□□□□□ -1.13
PGK1YCR012W BFR2Q06631 534 aaKnown RBP7.98□□□□□ -1.13
PGK1YCR012W LEU3P08638 886 aa7.96□□□□□ -1.14
PGK1YCR012W PRS1P32895 427 aaKnown RBP7.96□□□□□ -1.14
PGK1YCR012W PSD2P53037 1138 aaKnown RBP7.95□□□□□ -1.14
PGK1YCR012W ORC1P54784 914 aaPredicted RBP7.95□□□□□ -1.14
PGK1YCR012W TRM3Q07527 1436 aa7.95□□□□□ -1.14
PGK1YCR012W YOR093CQ12275 1648 aa7.93□□□□□ -1.14
PGK1YCR012W BNR1P40450 1375 aa7.92□□□□□ -1.14
PGK1YCR012W YLR419WQ06698 1435 aaKnown RBP7.91□□□□□ -1.14
PGK1YCR012W TY3B-IQ7LHG5 1498 aaKnown RBP7.9□□□□□ -1.14
PGK1YCR012W RAV1P47104 1357 aa7.88□□□□□ -1.15
PGK1YCR012W RTC1Q08281 1341 aa7.88□□□□□ -1.15
PGK1YCR012W CHC1P22137 1653 aaKnown RBP7.87□□□□□ -1.15
PGK1YCR012W PDS5Q04264 1277 aa7.87□□□□□ -1.15
PGK1YCR012W TAF5P38129 798 aa7.85□□□□□ -1.15
PGK1YCR012W DOP1Q03921 1698 aa7.83□□□□□ -1.16
PGK1YCR012W SEC7P11075 2009 aaKnown RBP7.83□□□□□ -1.16
PGK1YCR012W SCT1P32784 759 aa7.83□□□□□ -1.16
PGK1YCR012W ESL2P36168 1195 aa7.83□□□□□ -1.16
PGK1YCR012W YAP3P38749 330 aa7.83□□□□□ -1.16
PGK1YCR012W PDR11P40550 1411 aa7.82□□□□□ -1.16
PGK1YCR012W KIP3P53086 805 aaKnown RBP7.82□□□□□ -1.16
PGK1YCR012W TFA1P36100 482 aa7.8□□□□□ -1.16
PGK1YCR012W URN1Q06525 465 aaKnown RBP7.79□□□□□ -1.16
PGK1YCR012W VMR1P38735 1592 aa7.79□□□□□ -1.16
PGK1YCR012W IML1P47170 1584 aa7.78□□□□□ -1.16
PGK1YCR012W NUP188P52593 1655 aaKnown RBP7.76□□□□□ -1.17
PGK1YCR012W NST1P53935 1240 aa7.76□□□□□ -1.17
PGK1YCR012W MAK10Q02197 733 aa7.76□□□□□ -1.17
PGK1YCR012W SPE2P21182 396 aa7.73□□□□□ -1.17
PGK1YCR012W NUP192P47054 1683 aa7.73□□□□□ -1.17
PGK1YCR012W CFT1Q06632 1357 aaKnown RBP7.72□□□□□ -1.17
PGK1YCR012W RPP0P05317 312 aaKnown RBP7.72□□□□□ -1.17
PGK1YCR012W CDC45Q08032 650 aa7.71□□□□□ -1.18
PGK1YCR012W VPS27P40343 622 aaKnown RBP7.7□□□□□ -1.18
PGK1YCR012W RTG3P38165 486 aa7.68□□□□□ -1.18
PGK1YCR012W FUN12P39730 1002 aaKnown RBP7.68□□□□□ -1.18
PGK1YCR012W DNF3Q12674 1656 aa7.67□□□□□ -1.18
PGK1YCR012W TAF8Q03750 510 aa7.66□□□□□ -1.18
PGK1YCR012W IOC4Q04213 475 aa7.66□□□□□ -1.18
PGK1YCR012W RVB2Q12464 471 aaKnown RBP7.66□□□□□ -1.18
PGK1YCR012W TYS1P36421 394 aaKnown RBP7.65□□□□□ -1.18
PGK1YCR012W FPR3P38911 411 aaKnown RBP7.65□□□□□ -1.18
PGK1YCR012W IPL1P38991 367 aa7.65□□□□□ -1.18
PGK1YCR012W CHZ1P40019 153 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms