RNA–Protein interactions for RNA: YCL036W

GFD2, Transcript of Protein of unknown function, yeastyeast

Gene GFD2, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GFD2YCL036W TAF7Q05021 590 aa18.11■□□□□ 0.49
GFD2YCL036W TRM732Q03496 1420 aa18.07■□□□□ 0.48
GFD2YCL036W NTE1Q04958 1679 aa18.04■□□□□ 0.48
GFD2YCL036W SNT2P53127 1403 aa18.01■□□□□ 0.47
GFD2YCL036W RPO21P04050 1733 aaKnown RBP17.98■□□□□ 0.47
GFD2YCL036W GEA1P47102 1408 aaPredicted RBP17.97■□□□□ 0.47
GFD2YCL036W IFH1P39520 1085 aa17.93■□□□□ 0.46
GFD2YCL036W TY3B-GQ99315 1547 aa17.88■□□□□ 0.45
GFD2YCL036W IKI3Q06706 1349 aaKnown RBP17.87■□□□□ 0.45
GFD2YCL036W NUP170P38181 1502 aa17.85■□□□□ 0.45
GFD2YCL036W GEA2P39993 1459 aaKnown RBP17.82■□□□□ 0.44
GFD2YCL036W IRC20Q06554 1556 aa17.82■□□□□ 0.44
GFD2YCL036W NUP159P40477 1460 aa17.81■□□□□ 0.44
GFD2YCL036W YBT1P32386 1661 aa17.8■□□□□ 0.44
GFD2YCL036W YRF1-1P0CX20 1796 aa17.74■□□□□ 0.43
GFD2YCL036W YRF1-5P0CX21 1796 aa17.74■□□□□ 0.43
GFD2YCL036W YRF1-8P0CX22 1796 aa17.74■□□□□ 0.43
GFD2YCL036W RTT106P40161 455 aa17.72■□□□□ 0.43
GFD2YCL036W VPS15P22219 1454 aa17.69■□□□□ 0.42
GFD2YCL036W MET5P47169 1442 aa17.68■□□□□ 0.42
GFD2YCL036W SSM4P40318 1319 aa17.67■□□□□ 0.42
GFD2YCL036W SPO14P36126 1683 aa17.64■□□□□ 0.41
GFD2YCL036W CAT8P39113 1433 aa17.63■□□□□ 0.41
GFD2YCL036W PDR12Q02785 1511 aa17.61■□□□□ 0.41
GFD2YCL036W GDB1Q06625 1536 aa17.57■□□□□ 0.4
GFD2YCL036W PDR10P51533 1564 aa17.56■□□□□ 0.4
GFD2YCL036W ARO1P08566 1588 aaKnown RBP17.53■□□□□ 0.4
GFD2YCL036W MET10P39692 1035 aa17.5■□□□□ 0.39
GFD2YCL036W NUP157P40064 1391 aaKnown RBP17.47■□□□□ 0.39
GFD2YCL036W SRB8P25648 1427 aa17.39■□□□□ 0.37
GFD2YCL036W BUD3P25558 1636 aa17.39■□□□□ 0.37
GFD2YCL036W CKB1P43639 278 aa17.33■□□□□ 0.37
GFD2YCL036W IQG1Q12280 1495 aa17.3■□□□□ 0.36
GFD2YCL036W YSP2Q06681 1438 aa17.27■□□□□ 0.35
GFD2YCL036W LTE1P07866 1435 aa17.26■□□□□ 0.35
GFD2YCL036W GCN2P15442 1659 aa17.21■□□□□ 0.34
GFD2YCL036W MMS1Q06211 1407 aa17.15■□□□□ 0.34
GFD2YCL036W SEC7P11075 2009 aaKnown RBP17.15■□□□□ 0.34
GFD2YCL036W DOP1Q03921 1698 aa17.12■□□□□ 0.33
GFD2YCL036W BUD21Q08492 214 aaPredicted RBP17.1■□□□□ 0.33
GFD2YCL036W CHC1P22137 1653 aaKnown RBP17.08■□□□□ 0.32
GFD2YCL036W BNR1P40450 1375 aa17.07■□□□□ 0.32
GFD2YCL036W DRS2P39524 1355 aa17.05■□□□□ 0.32
GFD2YCL036W TRM3Q07527 1436 aa17.04■□□□□ 0.32
GFD2YCL036W BNI1P41832 1953 aa17.02■□□□□ 0.31
GFD2YCL036W YOR093CQ12275 1648 aa17.02■□□□□ 0.31
GFD2YCL036W PDR5P33302 1511 aaKnown RBP16.93■□□□□ 0.3
GFD2YCL036W ITT1Q04638 464 aa16.9■□□□□ 0.3
GFD2YCL036W VMR1P38735 1592 aa16.88■□□□□ 0.29
GFD2YCL036W NUP188P52593 1655 aaKnown RBP16.84■□□□□ 0.29
GFD2YCL036W NOP7P53261 605 aaKnown RBP16.81■□□□□ 0.28
GFD2YCL036W DNF2Q12675 1612 aa16.77■□□□□ 0.28
GFD2YCL036W IML1P47170 1584 aa16.75■□□□□ 0.27
GFD2YCL036W PDR11P40550 1411 aa16.75■□□□□ 0.27
GFD2YCL036W PAF1P38351 445 aa16.73■□□□□ 0.27
GFD2YCL036W POL5P39985 1022 aaKnown RBP16.72■□□□□ 0.27
GFD2YCL036W BFR2Q06631 534 aaKnown RBP16.69■□□□□ 0.26
GFD2YCL036W RAV1P47104 1357 aa16.68■□□□□ 0.26
GFD2YCL036W RTC1Q08281 1341 aa16.59■□□□□ 0.25
GFD2YCL036W NUP192P47054 1683 aa16.57■□□□□ 0.24
GFD2YCL036W TY3B-IQ7LHG5 1498 aaKnown RBP16.52■□□□□ 0.23
GFD2YCL036W TYS1P36421 394 aaKnown RBP16.5■□□□□ 0.23
GFD2YCL036W IPL1P38991 367 aa16.5■□□□□ 0.23
GFD2YCL036W URN1Q06525 465 aaKnown RBP16.48■□□□□ 0.23
GFD2YCL036W TAF5P38129 798 aa16.44■□□□□ 0.22
GFD2YCL036W ORC1P54784 914 aaPredicted RBP16.44■□□□□ 0.22
GFD2YCL036W YAP3P38749 330 aa16.42■□□□□ 0.22
GFD2YCL036W DNF3Q12674 1656 aa16.42■□□□□ 0.22
GFD2YCL036W MHP1P43638 1398 aa16.37■□□□□ 0.21
GFD2YCL036W ESL2P36168 1195 aa16.36■□□□□ 0.21
GFD2YCL036W HAP1P0CE41 1502 aa16.36■□□□□ 0.21
GFD2YCL036W YLR419WQ06698 1435 aaKnown RBP16.35■□□□□ 0.21
GFD2YCL036W SEC3P33332 1336 aaKnown RBP16.34■□□□□ 0.21
GFD2YCL036W SPT7P35177 1332 aa16.34■□□□□ 0.21
GFD2YCL036W NSR1P27476 414 aaKnown RBP RIP-Chip data16.32■□□□□ 0.2not detected
GFD2YCL036W KIP3P53086 805 aaKnown RBP16.31■□□□□ 0.2
GFD2YCL036W BCK1Q01389 1478 aa16.29■□□□□ 0.2
GFD2YCL036W RAD9P14737 1309 aa16.27■□□□□ 0.2
GFD2YCL036W ALD4P46367 519 aaKnown RBP16.22■□□□□ 0.19
GFD2YCL036W ENP1P38333 483 aaKnown RBP16.2■□□□□ 0.18
GFD2YCL036W SPE2P21182 396 aa16.19■□□□□ 0.18
GFD2YCL036W TAF8Q03750 510 aa16.18■□□□□ 0.18
GFD2YCL036W CAB1Q04430 367 aa16.18■□□□□ 0.18
GFD2YCL036W PSD2P53037 1138 aaKnown RBP16.16■□□□□ 0.18
GFD2YCL036W ABP1P15891 592 aaKnown RBP16.16■□□□□ 0.18
GFD2YCL036W PDS5Q04264 1277 aa16.15■□□□□ 0.18
GFD2YCL036W LEU3P08638 886 aa16.12■□□□□ 0.17
GFD2YCL036W KRE5P22023 1365 aa16.12■□□□□ 0.17
GFD2YCL036W MLP1Q02455 1875 aaKnown RBP16.12■□□□□ 0.17
GFD2YCL036W MAK10Q02197 733 aa16.08■□□□□ 0.17
GFD2YCL036W USO1P25386 1790 aa16.07■□□□□ 0.16
GFD2YCL036W SCT1P32784 759 aa16.05■□□□□ 0.16
GFD2YCL036W MRX12P47084 519 aa16.05■□□□□ 0.16
GFD2YCL036W CFT1Q06632 1357 aaKnown RBP16.04■□□□□ 0.16
GFD2YCL036W NAP1P25293 417 aaKnown RBP16.03■□□□□ 0.16
GFD2YCL036W NST1P53935 1240 aa16.03■□□□□ 0.16
GFD2YCL036W RIA1P53893 1110 aa16.02■□□□□ 0.15
GFD2YCL036W CHZ1P40019 153 aaPredicted RBP16■□□□□ 0.15
GFD2YCL036W TY1B-NL2Q99337 1749 aaKnown RBP15.97■□□□□ 0.15
GFD2YCL036W RTG3P38165 486 aa15.97■□□□□ 0.15
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms