RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C NST1P53935 1240 aa6.16□□□□□ -1.42
SHG1YBR258C SPB4P25808 606 aaPredicted RBP6.15□□□□□ -1.42
SHG1YBR258C SOL3P38858 249 aa6.15□□□□□ -1.42
SHG1YBR258C YGR273CP53329 174 aa6.15□□□□□ -1.42
SHG1YBR258C UBP14P38237 781 aaKnown RBP6.13□□□□□ -1.43
SHG1YBR258C SET4P42948 560 aa6.13□□□□□ -1.43
SHG1YBR258C COX6P00427 148 aa6.12□□□□□ -1.43
SHG1YBR258C HTA1P04911 132 aaKnown RBP6.12□□□□□ -1.43
SHG1YBR258C HTA2P04912 132 aa6.12□□□□□ -1.43
SHG1YBR258C VNX1P42839 908 aa6.12□□□□□ -1.43
SHG1YBR258C YLR326WQ06170 240 aaKnown RBP6.12□□□□□ -1.43
SHG1YBR258C EAP1P36041 632 aaKnown RBP6.11□□□□□ -1.43
SHG1YBR258C RPN1P38764 993 aaKnown RBP6.11□□□□□ -1.43
SHG1YBR258C UBP9P39967 754 aa6.11□□□□□ -1.43
SHG1YBR258C YDR090CQ03193 310 aa6.11□□□□□ -1.43
SHG1YBR258C DCW1P36091 449 aa6.1□□□□□ -1.43
SHG1YBR258C MAM3Q12296 706 aa6.1□□□□□ -1.43
SHG1YBR258C YBL029C-AQ3E756 94 aa6.1□□□□□ -1.43
SHG1YBR258C AI4P03878 556 aa6.09□□□□□ -1.43
SHG1YBR258C WSC3Q12215 556 aa6.09□□□□□ -1.43
SHG1YBR258C MPH3P0CE00 602 aa6.08□□□□□ -1.44
SHG1YBR258C TIF11P38912 153 aaKnown RBP6.08□□□□□ -1.44
SHG1YBR258C VHR2P40041 505 aa6.08□□□□□ -1.44
SHG1YBR258C KEX1P09620 729 aa6.07□□□□□ -1.44
SHG1YBR258C IES2P40154 320 aa6.07□□□□□ -1.44
SHG1YBR258C NUP42P49686 430 aaKnown RBP6.07□□□□□ -1.44
SHG1YBR258C YNR021WP53723 404 aaKnown RBP6.07□□□□□ -1.44
SHG1YBR258C BUD31P25337 157 aaPredicted RBP6.06□□□□□ -1.44
SHG1YBR258C ILV3P39522 585 aaKnown RBP6.06□□□□□ -1.44
SHG1YBR258C TRP5P00931 707 aaKnown RBP6.05□□□□□ -1.44
SHG1YBR258C YEL023CP39992 682 aa6.05□□□□□ -1.44
SHG1YBR258C JIP4Q03361 876 aa6.05□□□□□ -1.44
SHG1YBR258C IOC2Q12072 812 aa6.05□□□□□ -1.44
SHG1YBR258C RAD54P32863 898 aa6.04□□□□□ -1.44
SHG1YBR258C PCS60P38137 543 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
SHG1YBR258C ULI1P43604 169 aa6.03□□□□□ -1.44
SHG1YBR258C PTC4P38089 393 aa6.02□□□□□ -1.45
SHG1YBR258C DAN4P47179 1161 aa6.02□□□□□ -1.45
SHG1YBR258C SPP1Q03012 353 aa6.02□□□□□ -1.45
SHG1YBR258C AIM7Q12156 149 aa6.02□□□□□ -1.45
SHG1YBR258C DIT2P21595 489 aa6□□□□□ -1.45
SHG1YBR258C KIC1P38692 1080 aa6□□□□□ -1.45
SHG1YBR258C ORC6P38826 435 aa5.99□□□□□ -1.45
SHG1YBR258C YNL035CP53962 389 aaKnown RBP5.99□□□□□ -1.45
SHG1YBR258C PSE1P32337 1089 aaKnown RBP5.98□□□□□ -1.45
SHG1YBR258C GAP1P19145 602 aaPredicted RBP5.97□□□□□ -1.45
SHG1YBR258C GLC3P32775 704 aa5.96□□□□□ -1.46
SHG1YBR258C SEC61P32915 480 aa5.96□□□□□ -1.46
SHG1YBR258C SLI15P38283 698 aa5.96□□□□□ -1.46
SHG1YBR258C LDB19Q12502 818 aa5.95□□□□□ -1.46
SHG1YBR258C KIN1P13185 1064 aa5.93□□□□□ -1.46
SHG1YBR258C RTG1P32607 177 aa5.93□□□□□ -1.46
SHG1YBR258C FKH1P40466 484 aa5.92□□□□□ -1.46
SHG1YBR258C RPP1BP10622 106 aaKnown RBP5.91□□□□□ -1.46
SHG1YBR258C TAF7Q05021 590 aa5.91□□□□□ -1.46
SHG1YBR258C CSC1Q06538 782 aa5.91□□□□□ -1.46
SHG1YBR258C RGR1P19263 1082 aa5.89□□□□□ -1.47
SHG1YBR258C CLB5P30283 435 aa5.89□□□□□ -1.47
SHG1YBR258C ATF2P53296 535 aa5.89□□□□□ -1.47
SHG1YBR258C MVP1P40959 511 aaKnown RBP5.88□□□□□ -1.47
SHG1YBR258C PML39Q03760 334 aa5.88□□□□□ -1.47
SHG1YBR258C CDC73Q06697 393 aa5.88□□□□□ -1.47
SHG1YBR258C TFB4Q12004 338 aa5.88□□□□□ -1.47
SHG1YBR258C YDL129WQ07555 291 aa5.87□□□□□ -1.47
SHG1YBR258C MPC54Q08550 464 aa5.87□□□□□ -1.47
SHG1YBR258C MID1P41821 548 aa5.86□□□□□ -1.47
SHG1YBR258C DPL1Q05567 589 aa5.86□□□□□ -1.47
SHG1YBR258C NCR1Q12200 1170 aa5.86□□□□□ -1.47
SHG1YBR258C AIR2Q12476 344 aaKnown RBP5.85□□□□□ -1.47
SHG1YBR258C TFG1P41895 735 aaPredicted RBP5.83□□□□□ -1.48
SHG1YBR258C TEA1P47988 759 aa5.83□□□□□ -1.48
SHG1YBR258C TY1B-DR4Q07793 1604 aa5.82□□□□□ -1.48
SHG1YBR258C ISU2Q12056 156 aa5.82□□□□□ -1.48
SHG1YBR258C HPC2Q01448 625 aa5.81□□□□□ -1.48
SHG1YBR258C YPR109WQ06104 294 aa5.81□□□□□ -1.48
SHG1YBR258C GUA1P38625 525 aaKnown RBP5.8□□□□□ -1.48
SHG1YBR258C ARH1P48360 493 aa5.8□□□□□ -1.48
SHG1YBR258C DMA2P53924 522 aa5.8□□□□□ -1.48
SHG1YBR258C PEX29Q03370 554 aa5.8□□□□□ -1.48
SHG1YBR258C SIT4P20604 311 aa5.79□□□□□ -1.48
SHG1YBR258C NMA111P53920 997 aa5.79□□□□□ -1.48
SHG1YBR258C PEX21P50091 288 aa5.78□□□□□ -1.48
SHG1YBR258C HST2P53686 357 aa5.77□□□□□ -1.49
SHG1YBR258C NIS1P53939 407 aa5.77□□□□□ -1.49
SHG1YBR258C HAP5Q02516 242 aa5.77□□□□□ -1.49
SHG1YBR258C TUM1Q08686 304 aaKnown RBP5.77□□□□□ -1.49
SHG1YBR258C SSA2P10592 639 aaKnown RBP5.76□□□□□ -1.49
SHG1YBR258C SAP30P38429 201 aa5.76□□□□□ -1.49
SHG1YBR258C CSN12P47130 423 aa5.76□□□□□ -1.49
SHG1YBR258C KTR1P27810 393 aaKnown RBP5.75□□□□□ -1.49
SHG1YBR258C FPK1P53739 893 aa5.75□□□□□ -1.49
SHG1YBR258C BNI4P53858 892 aa5.75□□□□□ -1.49
SHG1YBR258C YDR344CQ05510 147 aa5.75□□□□□ -1.49
SHG1YBR258C YRR1Q12172 810 aa5.75□□□□□ -1.49
SHG1YBR258C SIS1P25294 352 aaKnown RBP5.74□□□□□ -1.49
SHG1YBR258C RTF1P53064 558 aa5.74□□□□□ -1.49
SHG1YBR258C ECM5Q03214 1411 aa5.74□□□□□ -1.49
SHG1YBR258C HGH1P48362 394 aaKnown RBP5.73□□□□□ -1.49
SHG1YBR258C BMT6Q12291 365 aa5.73□□□□□ -1.49
SHG1YBR258C RAM1P22007 431 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms