RNA–Protein interactions for RNA: YBR189W

RPS9B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS9B, Length 588 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS9B	YBR189W	YGR273C	P53329	174 aa		7.73	□□□□□ -1.17
RPS9B	YBR189W	YDR090C	Q03193	310 aa		7.73	□□□□□ -1.17
RPS9B	YBR189W	MAK21	Q12176	1025 aa	Known RBP	7.73	□□□□□ -1.17
RPS9B	YBR189W	IES2	P40154	320 aa		7.72	□□□□□ -1.17
RPS9B	YBR189W	NUP42	P49686	430 aa	Known RBP	7.71	□□□□□ -1.18
RPS9B	YBR189W	YNR021W	P53723	404 aa	Known RBP	7.71	□□□□□ -1.18
RPS9B	YBR189W	NST1	P53935	1240 aa		7.71	□□□□□ -1.18
RPS9B	YBR189W	YLR326W	Q06170	240 aa	Known RBP	7.71	□□□□□ -1.18
RPS9B	YBR189W	SET4	P42948	560 aa		7.7	□□□□□ -1.18
RPS9B	YBR189W	DCW1	P36091	449 aa		7.69	□□□□□ -1.18
RPS9B	YBR189W	DIT2	P21595	489 aa		7.68	□□□□□ -1.18
RPS9B	YBR189W	ABP1	P15891	592 aa	Known RBP	7.67	□□□□□ -1.18
RPS9B	YBR189W	MSB4	Q12317	492 aa		7.67	□□□□□ -1.18
RPS9B	YBR189W	WSC3	Q12215	556 aa		7.66	□□□□□ -1.18
RPS9B	YBR189W	KEX1	P09620	729 aa		7.65	□□□□□ -1.18
RPS9B	YBR189W	GLC3	P32775	704 aa		7.64	□□□□□ -1.19
RPS9B	YBR189W	HTA1	P04911	132 aa	Known RBP	7.63	□□□□□ -1.19
RPS9B	YBR189W	HTA2	P04912	132 aa		7.63	□□□□□ -1.19
RPS9B	YBR189W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	7.63	□□□□□ -1.19	not detected
RPS9B	YBR189W	ILV3	P39522	585 aa	Known RBP	7.62	□□□□□ -1.19
RPS9B	YBR189W	YBL029C-A	Q3E756	94 aa		7.62	□□□□□ -1.19
RPS9B	YBR189W	KIN1	P13185	1064 aa		7.61	□□□□□ -1.19
RPS9B	YBR189W	RAD54	P32863	898 aa		7.61	□□□□□ -1.19
RPS9B	YBR189W	AIM7	Q12156	149 aa		7.6	□□□□□ -1.19
RPS9B	YBR189W	AI4	P03878	556 aa		7.59	□□□□□ -1.19
RPS9B	YBR189W	MPH3	P0CE00	602 aa		7.59	□□□□□ -1.19
RPS9B	YBR189W	VNX1	P42839	908 aa		7.59	□□□□□ -1.19
RPS9B	YBR189W	DMA2	P53924	522 aa		7.59	□□□□□ -1.19
RPS9B	YBR189W	KIC1	P38692	1080 aa		7.58	□□□□□ -1.2
RPS9B	YBR189W	YEL023C	P39992	682 aa		7.57	□□□□□ -1.2
RPS9B	YBR189W	TRP5	P00931	707 aa	Known RBP	7.56	□□□□□ -1.2
RPS9B	YBR189W	EAP1	P36041	632 aa	Known RBP	7.56	□□□□□ -1.2
RPS9B	YBR189W	ORC6	P38826	435 aa		7.53	□□□□□ -1.2
RPS9B	YBR189W	TIF11	P38912	153 aa	Known RBP	7.53	□□□□□ -1.2
RPS9B	YBR189W	DAN4	P47179	1161 aa		7.53	□□□□□ -1.2
RPS9B	YBR189W	PSE1	P32337	1089 aa	Known RBP	7.52	□□□□□ -1.21
RPS9B	YBR189W	PTC4	P38089	393 aa		7.52	□□□□□ -1.21
RPS9B	YBR189W	ULI1	P43604	169 aa		7.52	□□□□□ -1.21
RPS9B	YBR189W	ATF2	P53296	535 aa		7.52	□□□□□ -1.21
RPS9B	YBR189W	SLI15	P38283	698 aa		7.5	□□□□□ -1.21
RPS9B	YBR189W	UBP9	P39967	754 aa		7.5	□□□□□ -1.21
RPS9B	YBR189W	SPP1	Q03012	353 aa		7.5	□□□□□ -1.21
RPS9B	YBR189W	IOC2	Q12072	812 aa		7.5	□□□□□ -1.21
RPS9B	YBR189W	JIP4	Q03361	876 aa		7.49	□□□□□ -1.21
RPS9B	YBR189W	GUA1	P38625	525 aa	Known RBP	7.47	□□□□□ -1.21
RPS9B	YBR189W	GAP1	P19145	602 aa	Predicted RBP	7.46	□□□□□ -1.22
RPS9B	YBR189W	RGR1	P19263	1082 aa		7.45	□□□□□ -1.22
RPS9B	YBR189W	MVP1	P40959	511 aa	Known RBP	7.43	□□□□□ -1.22
RPS9B	YBR189W	YNL035C	P53962	389 aa	Known RBP	7.43	□□□□□ -1.22
RPS9B	YBR189W	CDC73	Q06697	393 aa		7.43	□□□□□ -1.22
RPS9B	YBR189W	MID1	P41821	548 aa		7.4	□□□□□ -1.22
RPS9B	YBR189W	CSC1	Q06538	782 aa		7.4	□□□□□ -1.22
RPS9B	YBR189W	LDB19	Q12502	818 aa		7.4	□□□□□ -1.22
RPS9B	YBR189W	TEA1	P47988	759 aa		7.39	□□□□□ -1.23
RPS9B	YBR189W	PML39	Q03760	334 aa		7.39	□□□□□ -1.23
RPS9B	YBR189W	SIS1	P25294	352 aa	Known RBP	7.38	□□□□□ -1.23
RPS9B	YBR189W	RTG1	P32607	177 aa		7.38	□□□□□ -1.23
RPS9B	YBR189W	SEC61	P32915	480 aa		7.37	□□□□□ -1.23
RPS9B	YBR189W	HPC2	Q01448	625 aa		7.37	□□□□□ -1.23
RPS9B	YBR189W	RPP1B	P10622	106 aa	Known RBP	7.36	□□□□□ -1.23
RPS9B	YBR189W	CLB5	P30283	435 aa		7.35	□□□□□ -1.23
RPS9B	YBR189W	YPR109W	Q06104	294 aa		7.35	□□□□□ -1.23
RPS9B	YBR189W	MPC54	Q08550	464 aa		7.35	□□□□□ -1.23
RPS9B	YBR189W	TFB4	Q12004	338 aa		7.35	□□□□□ -1.23
RPS9B	YBR189W	KTR1	P27810	393 aa	Known RBP	7.34	□□□□□ -1.23
RPS9B	YBR189W	CSN12	P47130	423 aa		7.34	□□□□□ -1.23
RPS9B	YBR189W	DPL1	Q05567	589 aa		7.34	□□□□□ -1.23
RPS9B	YBR189W	NIS1	P53939	407 aa		7.33	□□□□□ -1.24
RPS9B	YBR189W	TFB3	Q03290	321 aa		7.32	□□□□□ -1.24
RPS9B	YBR189W	PEX21	P50091	288 aa		7.3	□□□□□ -1.24
RPS9B	YBR189W	PEX29	Q03370	554 aa		7.3	□□□□□ -1.24
RPS9B	YBR189W	TUM1	Q08686	304 aa	Known RBP	7.3	□□□□□ -1.24
RPS9B	YBR189W	TYW1	Q08960	810 aa	Known RBP	7.3	□□□□□ -1.24
RPS9B	YBR189W	NCR1	Q12200	1170 aa		7.3	□□□□□ -1.24
RPS9B	YBR189W	SSA2	P10592	639 aa	Known RBP	7.29	□□□□□ -1.24
RPS9B	YBR189W	FKH1	P40466	484 aa		7.29	□□□□□ -1.24
RPS9B	YBR189W	HGH1	P48362	394 aa	Known RBP	7.29	□□□□□ -1.24
RPS9B	YBR189W	FPK1	P53739	893 aa		7.29	□□□□□ -1.24
RPS9B	YBR189W	YDL129W	Q07555	291 aa		7.29	□□□□□ -1.24
RPS9B	YBR189W	ISU2	Q12056	156 aa		7.28	□□□□□ -1.24
RPS9B	YBR189W	RLF2	Q12495	606 aa		7.28	□□□□□ -1.24
RPS9B	YBR189W	SIT4	P20604	311 aa		7.27	□□□□□ -1.25
RPS9B	YBR189W	PKC1	P24583	1151 aa		7.27	□□□□□ -1.25
RPS9B	YBR189W	HST2	P53686	357 aa		7.27	□□□□□ -1.25
RPS9B	YBR189W	NMA111	P53920	997 aa		7.27	□□□□□ -1.25
RPS9B	YBR189W	YRR1	Q12172	810 aa		7.27	□□□□□ -1.25
RPS9B	YBR189W	BRL1	P38770	471 aa		7.25	□□□□□ -1.25
RPS9B	YBR189W	TFG1	P41895	735 aa	Predicted RBP	7.25	□□□□□ -1.25
RPS9B	YBR189W	SCJ1	P25303	377 aa		7.24	□□□□□ -1.25
RPS9B	YBR189W	GLN1	P32288	370 aa	Known RBP	7.24	□□□□□ -1.25
RPS9B	YBR189W	YMR196W	Q04336	1088 aa		7.24	□□□□□ -1.25
RPS9B	YBR189W	YDR344C	Q05510	147 aa		7.24	□□□□□ -1.25
RPS9B	YBR189W	ESS1	P22696	170 aa		7.22	□□□□□ -1.25
RPS9B	YBR189W	MMP1	Q12372	583 aa		7.22	□□□□□ -1.25
RPS9B	YBR189W	AIR2	Q12476	344 aa	Known RBP	7.22	□□□□□ -1.25
RPS9B	YBR189W	SAP30	P38429	201 aa		7.21	□□□□□ -1.26
RPS9B	YBR189W	PDR1	P12383	1068 aa		7.2	□□□□□ -1.26
RPS9B	YBR189W	ARH1	P48360	493 aa		7.2	□□□□□ -1.26
RPS9B	YBR189W	YJU3	P28321	313 aa		7.19	□□□□□ -1.26
RPS9B	YBR189W	HAP5	Q02516	242 aa		7.19	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms