RNA–Protein interactions for RNA: YBR082C

UBC4, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene UBC4, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC4YBR082C PDR15Q04182 1529 aaKnown RBP8.09□□□□□ -1.11
UBC4YBR082C NTE1Q04958 1679 aa8.08□□□□□ -1.12
UBC4YBR082C IFH1P39520 1085 aa8.06□□□□□ -1.12
UBC4YBR082C ULS1Q08562 1619 aa8.06□□□□□ -1.12
UBC4YBR082C RPO21P04050 1733 aaKnown RBP8.05□□□□□ -1.12
UBC4YBR082C SNT2P53127 1403 aa8.03□□□□□ -1.12
UBC4YBR082C NUP159P40477 1460 aa8.03□□□□□ -1.12
UBC4YBR082C RTT106P40161 455 aa8.03□□□□□ -1.12
UBC4YBR082C MET5P47169 1442 aa8.03□□□□□ -1.12
UBC4YBR082C GEA1P47102 1408 aaPredicted RBP8.01□□□□□ -1.13
UBC4YBR082C GEA2P39993 1459 aaKnown RBP8□□□□□ -1.13
UBC4YBR082C FAP1P53971 965 aa7.96□□□□□ -1.14
UBC4YBR082C YRF1-1P0CX20 1796 aa7.96□□□□□ -1.14
UBC4YBR082C YRF1-5P0CX21 1796 aa7.96□□□□□ -1.14
UBC4YBR082C YRF1-8P0CX22 1796 aa7.96□□□□□ -1.14
UBC4YBR082C IRC20Q06554 1556 aa7.94□□□□□ -1.14
UBC4YBR082C VPS15P22219 1454 aa7.93□□□□□ -1.14
UBC4YBR082C MET10P39692 1035 aa7.92□□□□□ -1.14
UBC4YBR082C IKI3Q06706 1349 aaKnown RBP7.92□□□□□ -1.14
UBC4YBR082C TY3B-GQ99315 1547 aa7.91□□□□□ -1.14
UBC4YBR082C YBT1P32386 1661 aa7.9□□□□□ -1.14
UBC4YBR082C SPO14P36126 1683 aa7.89□□□□□ -1.15
UBC4YBR082C CAT8P39113 1433 aa7.89□□□□□ -1.15
UBC4YBR082C PDR12Q02785 1511 aa7.88□□□□□ -1.15
UBC4YBR082C GDB1Q06625 1536 aa7.87□□□□□ -1.15
UBC4YBR082C LTE1P07866 1435 aa7.86□□□□□ -1.15
UBC4YBR082C NUP157P40064 1391 aaKnown RBP7.85□□□□□ -1.15
UBC4YBR082C PDR10P51533 1564 aa7.85□□□□□ -1.15
UBC4YBR082C NUP170P38181 1502 aa7.84□□□□□ -1.15
UBC4YBR082C CKB1P43639 278 aa7.81□□□□□ -1.16
UBC4YBR082C SSM4P40318 1319 aa7.8□□□□□ -1.16
UBC4YBR082C ARO1P08566 1588 aaKnown RBP7.8□□□□□ -1.16
UBC4YBR082C IQG1Q12280 1495 aa7.79□□□□□ -1.16
UBC4YBR082C BUD3P25558 1636 aa7.78□□□□□ -1.16
UBC4YBR082C SRB8P25648 1427 aa7.78□□□□□ -1.16
UBC4YBR082C DRS2P39524 1355 aa7.76□□□□□ -1.17
UBC4YBR082C YSP2Q06681 1438 aa7.71□□□□□ -1.17
UBC4YBR082C DOP1Q03921 1698 aa7.71□□□□□ -1.18
UBC4YBR082C ITT1Q04638 464 aa7.7□□□□□ -1.18
UBC4YBR082C BUD21Q08492 214 aaPredicted RBP7.7□□□□□ -1.18
UBC4YBR082C MMS1Q06211 1407 aa7.69□□□□□ -1.18
UBC4YBR082C TRM3Q07527 1436 aa7.69□□□□□ -1.18
UBC4YBR082C BNI1P41832 1953 aa7.69□□□□□ -1.18
UBC4YBR082C BNR1P40450 1375 aa7.69□□□□□ -1.18
UBC4YBR082C CHC1P22137 1653 aaKnown RBP7.67□□□□□ -1.18
UBC4YBR082C SEC7P11075 2009 aaKnown RBP7.66□□□□□ -1.18
UBC4YBR082C GCN2P15442 1659 aa7.64□□□□□ -1.19
UBC4YBR082C YOR093CQ12275 1648 aa7.56□□□□□ -1.2
UBC4YBR082C DNF2Q12675 1612 aa7.56□□□□□ -1.2
UBC4YBR082C PAF1P38351 445 aa7.54□□□□□ -1.2
UBC4YBR082C PRY3P47033 881 aa7.54□□□□□ -1.2
UBC4YBR082C NOP7P53261 605 aaKnown RBP7.54□□□□□ -1.2
UBC4YBR082C NUP188P52593 1655 aaKnown RBP7.53□□□□□ -1.2
UBC4YBR082C PDR5P33302 1511 aaKnown RBP7.52□□□□□ -1.2
UBC4YBR082C URN1Q06525 465 aaKnown RBP7.52□□□□□ -1.21
UBC4YBR082C VMR1P38735 1592 aa7.51□□□□□ -1.21
UBC4YBR082C IML1P47170 1584 aa7.5□□□□□ -1.21
UBC4YBR082C BFR2Q06631 534 aaKnown RBP7.48□□□□□ -1.21
UBC4YBR082C ABP1P15891 592 aaKnown RBP7.47□□□□□ -1.21
UBC4YBR082C YAP3P38749 330 aa7.46□□□□□ -1.22
UBC4YBR082C IPL1P38991 367 aa7.45□□□□□ -1.22
UBC4YBR082C PDR11P40550 1411 aa7.44□□□□□ -1.22
UBC4YBR082C RAV1P47104 1357 aa7.44□□□□□ -1.22
UBC4YBR082C TYS1P36421 394 aaKnown RBP7.42□□□□□ -1.22
UBC4YBR082C DNF3Q12674 1656 aa7.41□□□□□ -1.22
UBC4YBR082C POL5P39985 1022 aaKnown RBP7.41□□□□□ -1.22
UBC4YBR082C RTC1Q08281 1341 aa7.41□□□□□ -1.22
UBC4YBR082C TAF5P38129 798 aa7.36□□□□□ -1.23
UBC4YBR082C ESL2P36168 1195 aa7.35□□□□□ -1.23
UBC4YBR082C HAP1P0CE41 1502 aa7.35□□□□□ -1.23
UBC4YBR082C NUP192P47054 1683 aa7.35□□□□□ -1.23
UBC4YBR082C ORC1P54784 914 aaPredicted RBP7.34□□□□□ -1.23
UBC4YBR082C MAK10Q02197 733 aa7.32□□□□□ -1.24
UBC4YBR082C TY3B-IQ7LHG5 1498 aaKnown RBP7.3□□□□□ -1.24
UBC4YBR082C ALD4P46367 519 aaKnown RBP7.29□□□□□ -1.24
UBC4YBR082C MRX12P47084 519 aa7.29□□□□□ -1.24
UBC4YBR082C RAD9P14737 1309 aa7.28□□□□□ -1.24
UBC4YBR082C NAP1P25293 417 aaKnown RBP7.28□□□□□ -1.24
UBC4YBR082C KIP3P53086 805 aaKnown RBP7.28□□□□□ -1.24
UBC4YBR082C BCK1Q01389 1478 aa7.28□□□□□ -1.24
UBC4YBR082C CAB1Q04430 367 aa7.27□□□□□ -1.25
UBC4YBR082C KRE5P22023 1365 aa7.26□□□□□ -1.25
UBC4YBR082C SCT1P32784 759 aa7.26□□□□□ -1.25
UBC4YBR082C MIF2P35201 549 aa7.26□□□□□ -1.25
UBC4YBR082C TAF8Q03750 510 aa7.25□□□□□ -1.25
UBC4YBR082C USO1P25386 1790 aa7.25□□□□□ -1.25
UBC4YBR082C YLR419WQ06698 1435 aaKnown RBP7.25□□□□□ -1.25
UBC4YBR082C MHP1P43638 1398 aa7.24□□□□□ -1.25
UBC4YBR082C SPE2P21182 396 aa7.24□□□□□ -1.25
UBC4YBR082C RIA1P53893 1110 aa7.24□□□□□ -1.25
UBC4YBR082C TY1B-NL2Q99337 1749 aaKnown RBP7.24□□□□□ -1.25
UBC4YBR082C YCK3P39962 524 aa7.21□□□□□ -1.26
UBC4YBR082C SEC3P33332 1336 aaKnown RBP7.21□□□□□ -1.26
UBC4YBR082C CFT1Q06632 1357 aaKnown RBP7.2□□□□□ -1.26
UBC4YBR082C AAD16Q02895 342 aa7.2□□□□□ -1.26
UBC4YBR082C PDS5Q04264 1277 aa7.18□□□□□ -1.26
UBC4YBR082C CHZ1P40019 153 aaPredicted RBP7.17□□□□□ -1.26
UBC4YBR082C YNR029CP53729 429 aaKnown RBP7.17□□□□□ -1.26
UBC4YBR082C YMR196WQ04336 1088 aa7.17□□□□□ -1.26
UBC4YBR082C SPT7P35177 1332 aa7.17□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 80.1 ms