RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene ROX3, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROX3YBL093C TIF11P38912 153 aaKnown RBP8.99□□□□□ -0.97
ROX3YBL093C IFH1P39520 1085 aa8.99□□□□□ -0.97
ROX3YBL093C ATH1P48016 1211 aa8.99□□□□□ -0.97
ROX3YBL093C XRN1P22147 1528 aaKnown RBP8.99□□□□□ -0.97
ROX3YBL093C EAP1P36041 632 aaKnown RBP8.98□□□□□ -0.97
ROX3YBL093C ABP1P15891 592 aaKnown RBP8.96□□□□□ -0.98
ROX3YBL093C GUT1P32190 709 aa8.96□□□□□ -0.98
ROX3YBL093C DCW1P36091 449 aa8.95□□□□□ -0.98
ROX3YBL093C ULI1P43604 169 aa8.95□□□□□ -0.98
ROX3YBL093C HTA1P04911 132 aaKnown RBP8.92□□□□□ -0.98
ROX3YBL093C HTA2P04912 132 aa8.92□□□□□ -0.98
ROX3YBL093C SAS10Q12136 610 aaPredicted RBP8.92□□□□□ -0.98
ROX3YBL093C TRP5P00931 707 aaKnown RBP8.9□□□□□ -0.98
ROX3YBL093C VPS70P47161 811 aa8.9□□□□□ -0.98
ROX3YBL093C YPR148CQ06523 435 aa8.9□□□□□ -0.98
ROX3YBL093C REV3P14284 1504 aa8.88□□□□□ -0.99
ROX3YBL093C IOC2Q12072 812 aa8.87□□□□□ -0.99
ROX3YBL093C SIS1P25294 352 aaKnown RBP8.86□□□□□ -0.99
ROX3YBL093C THO2P53552 1597 aaKnown RBP8.84□□□□□ -0.99
ROX3YBL093C LDB19Q12502 818 aa8.84□□□□□ -0.99
ROX3YBL093C SIN3P22579 1536 aa8.84□□□□□ -0.99
ROX3YBL093C YEL023CP39992 682 aa8.82□□□□□ -1
ROX3YBL093C CKB1P43639 278 aa8.82□□□□□ -1
ROX3YBL093C JIP4Q03361 876 aa8.81□□□□□ -1
ROX3YBL093C PTC4P38089 393 aa8.8□□□□□ -1
ROX3YBL093C YNL035CP53962 389 aaKnown RBP8.8□□□□□ -1
ROX3YBL093C SOL3P38858 249 aa8.79□□□□□ -1
ROX3YBL093C YGR273CP53329 174 aa8.79□□□□□ -1
ROX3YBL093C BUD4P47136 1447 aa8.78□□□□□ -1
ROX3YBL093C SSK2P53599 1579 aa8.78□□□□□ -1
ROX3YBL093C RTG1P32607 177 aa8.77□□□□□ -1.01
ROX3YBL093C REF2P42073 533 aaPredicted RBP8.76□□□□□ -1.01
ROX3YBL093C ECM5Q03214 1411 aa8.76□□□□□ -1.01
ROX3YBL093C ATG2P53855 1592 aa8.74□□□□□ -1.01
ROX3YBL093C ESP1Q03018 1630 aa8.73□□□□□ -1.01
ROX3YBL093C SEC61P32915 480 aa8.73□□□□□ -1.01
ROX3YBL093C DAN4P47179 1161 aa8.73□□□□□ -1.01
ROX3YBL093C NST1P53935 1240 aa8.73□□□□□ -1.01
ROX3YBL093C MPH3P0CE00 602 aa8.72□□□□□ -1.01
ROX3YBL093C SPB4P25808 606 aaPredicted RBP8.72□□□□□ -1.01
ROX3YBL093C VHR2P40041 505 aa8.72□□□□□ -1.01
ROX3YBL093C TFG1P41895 735 aaPredicted RBP8.72□□□□□ -1.01
ROX3YBL093C NCR1Q12200 1170 aa8.72□□□□□ -1.01
ROX3YBL093C AI4P03878 556 aa8.71□□□□□ -1.02
ROX3YBL093C UBP14P38237 781 aaKnown RBP8.71□□□□□ -1.02
ROX3YBL093C PEP1P32319 1579 aa8.69□□□□□ -1.02
ROX3YBL093C FKH1P40466 484 aa8.69□□□□□ -1.02
ROX3YBL093C TAF2P23255 1407 aa8.69□□□□□ -1.02
ROX3YBL093C PBS2P08018 668 aa8.68□□□□□ -1.02
ROX3YBL093C KEX1P09620 729 aa8.68□□□□□ -1.02
ROX3YBL093C YLR326WQ06170 240 aaKnown RBP8.68□□□□□ -1.02
ROX3YBL093C MDS3P53094 1487 aa8.66□□□□□ -1.02
ROX3YBL093C AIR2Q12476 344 aaKnown RBP8.66□□□□□ -1.02
ROX3YBL093C KIC1P38692 1080 aa8.65□□□□□ -1.02
ROX3YBL093C MAK21Q12176 1025 aaKnown RBP8.65□□□□□ -1.02
ROX3YBL093C MYO2P19524 1574 aaKnown RBP8.64□□□□□ -1.03
ROX3YBL093C COX6P00427 148 aa8.63□□□□□ -1.03
ROX3YBL093C RAD54P32863 898 aa8.63□□□□□ -1.03
ROX3YBL093C YJL171CP46992 396 aa8.63□□□□□ -1.03
ROX3YBL093C PML39Q03760 334 aa8.63□□□□□ -1.03
ROX3YBL093C ILV3P39522 585 aaKnown RBP8.62□□□□□ -1.03
ROX3YBL093C YDR090CQ03193 310 aa8.62□□□□□ -1.03
ROX3YBL093C PCS60P38137 543 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03 RIP-Chip
ROX3YBL093C YDL129WQ07555 291 aa8.6□□□□□ -1.03
ROX3YBL093C DSF2P38213 736 aa8.59□□□□□ -1.03
ROX3YBL093C SLI15P38283 698 aa8.58□□□□□ -1.04
ROX3YBL093C SKI3P17883 1432 aaKnown RBP8.57□□□□□ -1.04
ROX3YBL093C MID1P41821 548 aa8.57□□□□□ -1.04
ROX3YBL093C SAP30P38429 201 aa8.56□□□□□ -1.04
ROX3YBL093C BMT6Q12291 365 aa8.56□□□□□ -1.04
ROX3YBL093C MAM3Q12296 706 aa8.56□□□□□ -1.04
ROX3YBL093C YPK9Q12697 1472 aa8.56□□□□□ -1.04
ROX3YBL093C PEX29Q03370 554 aa8.53□□□□□ -1.04
ROX3YBL093C RPP1BP10622 106 aaKnown RBP8.51□□□□□ -1.05
ROX3YBL093C IES2P40154 320 aa8.49□□□□□ -1.05
ROX3YBL093C SCC2Q04002 1493 aa8.49□□□□□ -1.05
ROX3YBL093C LEU3P08638 886 aa8.48□□□□□ -1.05
ROX3YBL093C POL1P13382 1468 aa8.47□□□□□ -1.05
ROX3YBL093C DPL1Q05567 589 aa8.47□□□□□ -1.05
ROX3YBL093C CDC73Q06697 393 aa8.47□□□□□ -1.05
ROX3YBL093C MPC54Q08550 464 aa8.47□□□□□ -1.05
ROX3YBL093C TY2B-LR1P0C2J3 1770 aa8.45□□□□□ -1.06
ROX3YBL093C TY2B-FP0CX63 1770 aa8.45□□□□□ -1.06
ROX3YBL093C TY2B-GR2P0CX64 1770 aa8.45□□□□□ -1.06
ROX3YBL093C TY2B-CP25384 1770 aa8.45□□□□□ -1.06
ROX3YBL093C TY2B-DR2Q03494 1770 aa8.45□□□□□ -1.06
ROX3YBL093C TY1B-DR1Q03855 1755 aa8.45□□□□□ -1.06
ROX3YBL093C TY2B-DR3Q07791 1770 aaKnown RBP8.45□□□□□ -1.06
ROX3YBL093C TY2B-OR1Q12113 1770 aa8.45□□□□□ -1.06
ROX3YBL093C TY2B-DR1Q12472 1770 aa8.45□□□□□ -1.06
ROX3YBL093C TY2B-OR2Q12501 1770 aa8.45□□□□□ -1.06
ROX3YBL093C RPO31P04051 1460 aa8.45□□□□□ -1.06
ROX3YBL093C NUP42P49686 430 aaKnown RBP8.43□□□□□ -1.06
ROX3YBL093C NMA111P53920 997 aa8.43□□□□□ -1.06
ROX3YBL093C DIT2P21595 489 aa8.42□□□□□ -1.06
ROX3YBL093C ARH1P48360 493 aa8.42□□□□□ -1.06
ROX3YBL093C ELP4Q02884 456 aaKnown RBP8.42□□□□□ -1.06
ROX3YBL093C TY1B-DR3Q99231 1755 aa8.41□□□□□ -1.06
ROX3YBL093C RKR1Q04781 1562 aa8.41□□□□□ -1.06
ROX3YBL093C UFD4P33202 1483 aa8.41□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms