RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W RLF2Q12495 606 aa3.64□□□□□ -1.83
SNC1YAL030W LDB19Q12502 818 aa3.64□□□□□ -1.83
SNC1YAL030W MIF2P35201 549 aa3.63□□□□□ -1.83
SNC1YAL030W EAP1P36041 632 aaKnown RBP3.63□□□□□ -1.83
SNC1YAL030W REF2P42073 533 aaPredicted RBP3.63□□□□□ -1.83
SNC1YAL030W YOL036WQ08206 761 aa3.63□□□□□ -1.83
SNC1YAL030W MSB4Q12317 492 aa3.63□□□□□ -1.83
SNC1YAL030W KIN1P13185 1064 aa3.62□□□□□ -1.83
SNC1YAL030W EDS1P38073 919 aa3.61□□□□□ -1.83
SNC1YAL030W HGH1P48362 394 aaKnown RBP3.61□□□□□ -1.83
SNC1YAL030W GYP5Q12344 894 aa3.61□□□□□ -1.83
SNC1YAL030W TRP5P00931 707 aaKnown RBP3.6□□□□□ -1.83
SNC1YAL030W DCW1P36091 449 aa3.6□□□□□ -1.83
SNC1YAL030W IES2P40154 320 aa3.6□□□□□ -1.83
SNC1YAL030W NUP42P49686 430 aaKnown RBP3.6□□□□□ -1.83
SNC1YAL030W IOC2Q12072 812 aa3.6□□□□□ -1.83
SNC1YAL030W ABP1P15891 592 aaKnown RBP3.59□□□□□ -1.83
SNC1YAL030W RTG1P32607 177 aa3.59□□□□□ -1.83
SNC1YAL030W GLC3P32775 704 aa3.59□□□□□ -1.83
SNC1YAL030W COX6P00427 148 aa3.58□□□□□ -1.84
SNC1YAL030W PTC3P34221 468 aaKnown RBP3.58□□□□□ -1.84
SNC1YAL030W TFG1P41895 735 aaPredicted RBP3.58□□□□□ -1.84
SNC1YAL030W SAM3Q08986 587 aa3.58□□□□□ -1.84
SNC1YAL030W NCR1Q12200 1170 aa3.58□□□□□ -1.84
SNC1YAL030W AIR2Q12476 344 aaKnown RBP3.58□□□□□ -1.84
SNC1YAL030W HTA1P04911 132 aaKnown RBP3.57□□□□□ -1.84
SNC1YAL030W HTA2P04912 132 aa3.57□□□□□ -1.84
SNC1YAL030W DIT2P21595 489 aa3.56□□□□□ -1.84
SNC1YAL030W FKH1P40466 484 aa3.56□□□□□ -1.84
SNC1YAL030W ATH1P48016 1211 aa3.56□□□□□ -1.84
SNC1YAL030W YNL035CP53962 389 aaKnown RBP3.56□□□□□ -1.84
SNC1YAL030W GRE2Q12068 342 aaKnown RBP3.56□□□□□ -1.84
SNC1YAL030W BMT6Q12291 365 aa3.56□□□□□ -1.84
SNC1YAL030W HPC2Q01448 625 aa3.55□□□□□ -1.84
SNC1YAL030W SEC61P32915 480 aa3.54□□□□□ -1.84
SNC1YAL030W PTC4P38089 393 aa3.53□□□□□ -1.84
SNC1YAL030W YEL023CP39992 682 aa3.53□□□□□ -1.84
SNC1YAL030W ATF2P53296 535 aa3.53□□□□□ -1.84
SNC1YAL030W JIP4Q03361 876 aa3.53□□□□□ -1.84
SNC1YAL030W GUT1P32190 709 aa3.52□□□□□ -1.85
SNC1YAL030W PSE1P32337 1089 aaKnown RBP3.52□□□□□ -1.85
SNC1YAL030W GUA1P38625 525 aaKnown RBP3.52□□□□□ -1.85
SNC1YAL030W YDR090CQ03193 310 aa3.52□□□□□ -1.85
SNC1YAL030W RGA2Q06407 1009 aa3.52□□□□□ -1.85
SNC1YAL030W UBP14P38237 781 aaKnown RBP3.51□□□□□ -1.85
SNC1YAL030W SAP30P38429 201 aa3.51□□□□□ -1.85
SNC1YAL030W YLR326WQ06170 240 aaKnown RBP3.51□□□□□ -1.85
SNC1YAL030W SSA2P10592 639 aaKnown RBP3.5□□□□□ -1.85
SNC1YAL030W KIC1P38692 1080 aa3.5□□□□□ -1.85
SNC1YAL030W VHR2P40041 505 aa3.5□□□□□ -1.85
SNC1YAL030W YGR273CP53329 174 aa3.5□□□□□ -1.85
SNC1YAL030W DAN4P47179 1161 aa3.49□□□□□ -1.85
SNC1YAL030W RAD54P32863 898 aa3.48□□□□□ -1.85
SNC1YAL030W BRL1P38770 471 aa3.48□□□□□ -1.85
SNC1YAL030W PML39Q03760 334 aa3.48□□□□□ -1.85
SNC1YAL030W YDL129WQ07555 291 aa3.48□□□□□ -1.85
SNC1YAL030W KEX1P09620 729 aa3.47□□□□□ -1.85
SNC1YAL030W TFB3Q03290 321 aa3.47□□□□□ -1.85
SNC1YAL030W CLB5P30283 435 aa3.46□□□□□ -1.86
SNC1YAL030W PCS60P38137 543 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
SNC1YAL030W ORC6P38826 435 aa3.46□□□□□ -1.86
SNC1YAL030W SOL3P38858 249 aa3.45□□□□□ -1.86
SNC1YAL030W CSN12P47130 423 aa3.45□□□□□ -1.86
SNC1YAL030W NST1P53935 1240 aa3.45□□□□□ -1.86
SNC1YAL030W MID1P41821 548 aa3.44□□□□□ -1.86
SNC1YAL030W ELP4Q02884 456 aaKnown RBP3.44□□□□□ -1.86
SNC1YAL030W PEX29Q03370 554 aa3.44□□□□□ -1.86
SNC1YAL030W AI4P03878 556 aa3.43□□□□□ -1.86
SNC1YAL030W MPH3P0CE00 602 aa3.43□□□□□ -1.86
SNC1YAL030W TEA1P47988 759 aa3.43□□□□□ -1.86
SNC1YAL030W RPP1BP10622 106 aaKnown RBP3.42□□□□□ -1.86
SNC1YAL030W GAP1P19145 602 aaPredicted RBP3.42□□□□□ -1.86
SNC1YAL030W CHL1P22516 861 aaPredicted RBP3.42□□□□□ -1.86
SNC1YAL030W SSA1P10591 642 aaKnown RBP3.41□□□□□ -1.86
SNC1YAL030W RGR1P19263 1082 aa3.41□□□□□ -1.86
SNC1YAL030W PKC1P24583 1151 aa3.41□□□□□ -1.86
SNC1YAL030W PRE3P38624 215 aa3.41□□□□□ -1.86
SNC1YAL030W ILV3P39522 585 aaKnown RBP3.41□□□□□ -1.86
SNC1YAL030W CSC1Q06538 782 aa3.41□□□□□ -1.86
SNC1YAL030W GLN1P32288 370 aaKnown RBP3.4□□□□□ -1.87
SNC1YAL030W GEF1P37020 779 aa3.4□□□□□ -1.87
SNC1YAL030W BIM1P40013 344 aa3.4□□□□□ -1.87
SNC1YAL030W MVP1P40959 511 aaKnown RBP3.4□□□□□ -1.87
SNC1YAL030W HST2P53686 357 aa3.4□□□□□ -1.87
SNC1YAL030W SUB2Q07478 446 aaKnown RBP3.4□□□□□ -1.87
SNC1YAL030W KTR1P27810 393 aaKnown RBP3.39□□□□□ -1.87
SNC1YAL030W ATG32P40458 529 aa3.39□□□□□ -1.87
SNC1YAL030W NOP8Q08287 484 aaPredicted RBP3.39□□□□□ -1.87
SNC1YAL030W TFB4Q12004 338 aa3.39□□□□□ -1.87
SNC1YAL030W SSA4P22202 642 aaKnown RBP3.38□□□□□ -1.87
SNC1YAL030W CSE4P36012 229 aa3.38□□□□□ -1.87
SNC1YAL030W RPL34BP40525 121 aaKnown RBP3.38□□□□□ -1.87
SNC1YAL030W YJL007CP47080 104 aa3.38□□□□□ -1.87
SNC1YAL030W SPT5P27692 1063 aaKnown RBP3.37□□□□□ -1.87
SNC1YAL030W YBL036CP38197 257 aa3.37□□□□□ -1.87
SNC1YAL030W SLI15P38283 698 aa3.37□□□□□ -1.87
SNC1YAL030W FPK1P53739 893 aa3.37□□□□□ -1.87
SNC1YAL030W NIS1P53939 407 aa3.37□□□□□ -1.87
SNC1YAL030W YML020WQ03722 664 aa3.37□□□□□ -1.87
SNC1YAL030W YMR196WQ04336 1088 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms