RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 YRF1-1P0CX20 1796 aa23.52■■□□□ 1.36
SCR1SCR1 YRF1-5P0CX21 1796 aa23.52■■□□□ 1.36
SCR1SCR1 YRF1-8P0CX22 1796 aa23.52■■□□□ 1.36
SCR1SCR1 RPO21P04050 1733 aaKnown RBP23.51■■□□□ 1.35
SCR1SCR1 VPS15P22219 1454 aa23.49■■□□□ 1.35
SCR1SCR1 STH1P32597 1359 aa23.45■■□□□ 1.34
SCR1SCR1 SNQ2P32568 1501 aaKnown RBP23.41■■□□□ 1.34
SCR1SCR1 BNI1P41832 1953 aa23.41■■□□□ 1.34
SCR1SCR1 ITT1Q04638 464 aa23.35■■□□□ 1.33
SCR1SCR1 SNT2P53127 1403 aa23.33■■□□□ 1.32
SCR1SCR1 DRS2P39524 1355 aa23.31■■□□□ 1.32
SCR1SCR1 MET10P39692 1035 aa23.22■■□□□ 1.31
SCR1SCR1 RTT106P40161 455 aa23.21■■□□□ 1.31
SCR1SCR1 MMS1Q06211 1407 aa23.14■■□□□ 1.29
SCR1SCR1 MLP2P40457 1679 aa23.13■■□□□ 1.29
SCR1SCR1 TAF7Q05021 590 aa23.09■■□□□ 1.29
SCR1SCR1 PDR12Q02785 1511 aa23.08■■□□□ 1.29
SCR1SCR1 SAS10Q12136 610 aaPredicted RBP23.08■■□□□ 1.29
SCR1SCR1 NUP170P38181 1502 aa23.07■■□□□ 1.28
SCR1SCR1 MIF2P35201 549 aa23.05■■□□□ 1.28
SCR1SCR1 ULS1Q08562 1619 aa23.04■■□□□ 1.28
SCR1SCR1 SPO14P36126 1683 aa23.03■■□□□ 1.28
SCR1SCR1 PDR15Q04182 1529 aaKnown RBP23.01■■□□□ 1.27
SCR1SCR1 ABP1P15891 592 aaKnown RBP22.94■■□□□ 1.26
SCR1SCR1 GDB1Q06625 1536 aa22.91■■□□□ 1.26
SCR1SCR1 IRC20Q06554 1556 aa22.88■■□□□ 1.25
SCR1SCR1 NUP157P40064 1391 aaKnown RBP22.86■■□□□ 1.25
SCR1SCR1 IQG1Q12280 1495 aa22.85■■□□□ 1.25
SCR1SCR1 BUD3P25558 1636 aa22.79■■□□□ 1.24
SCR1SCR1 TRM3Q07527 1436 aa22.79■■□□□ 1.24
SCR1SCR1 DNF2Q12675 1612 aa22.76■■□□□ 1.23
SCR1SCR1 IFH1P39520 1085 aa22.75■■□□□ 1.23
SCR1SCR1 DOP1Q03921 1698 aa22.74■■□□□ 1.23
SCR1SCR1 PDR10P51533 1564 aa22.74■■□□□ 1.23
SCR1SCR1 GEA1P47102 1408 aaPredicted RBP22.66■■□□□ 1.22
SCR1SCR1 CAT8P39113 1433 aa22.65■■□□□ 1.22
SCR1SCR1 YBT1P32386 1661 aa22.47■■□□□ 1.19
SCR1SCR1 TY3B-GQ99315 1547 aa22.47■■□□□ 1.19
SCR1SCR1 CHC1P22137 1653 aaKnown RBP22.43■■□□□ 1.18
SCR1SCR1 ARO1P08566 1588 aaKnown RBP22.41■■□□□ 1.18
SCR1SCR1 SEC7P11075 2009 aaKnown RBP22.38■■□□□ 1.17
SCR1SCR1 CKB1P43639 278 aa22.34■■□□□ 1.17
SCR1SCR1 YSP2Q06681 1438 aa22.3■■□□□ 1.16
SCR1SCR1 YFR006WP43590 535 aa22.28■■□□□ 1.16
SCR1SCR1 BNR1P40450 1375 aa22.25■■□□□ 1.15
SCR1SCR1 YOR093CQ12275 1648 aa22.2■■□□□ 1.15
SCR1SCR1 SRB8P25648 1427 aa22.14■■□□□ 1.13
SCR1SCR1 YAP3P38749 330 aa22.08■■□□□ 1.13
SCR1SCR1 URN1Q06525 465 aaKnown RBP22.04■■□□□ 1.12
SCR1SCR1 DNF3Q12674 1656 aa22.04■■□□□ 1.12
SCR1SCR1 BUD21Q08492 214 aaPredicted RBP21.93■■□□□ 1.1
SCR1SCR1 IKI3Q06706 1349 aaKnown RBP21.86■■□□□ 1.09
SCR1SCR1 MAK10Q02197 733 aa21.77■■□□□ 1.08
SCR1SCR1 NUP188P52593 1655 aaKnown RBP21.7■■□□□ 1.06
SCR1SCR1 IPL1P38991 367 aa21.7■■□□□ 1.06
SCR1SCR1 HAP1P0CE41 1502 aa21.68■■□□□ 1.06
SCR1SCR1 SSM4P40318 1319 aa21.55■■□□□ 1.04
SCR1SCR1 VMR1P38735 1592 aa21.54■■□□□ 1.04
SCR1SCR1 IML1P47170 1584 aa21.53■■□□□ 1.04
SCR1SCR1 TYS1P36421 394 aaKnown RBP21.51■■□□□ 1.03
SCR1SCR1 USO1P25386 1790 aa21.45■■□□□ 1.02
SCR1SCR1 GCN2P15442 1659 aa21.42■■□□□ 1.02
SCR1SCR1 PDR5P33302 1511 aaKnown RBP21.42■■□□□ 1.02
SCR1SCR1 TY1B-NL2Q99337 1749 aaKnown RBP21.41■■□□□ 1.02
SCR1SCR1 YMR196WQ04336 1088 aa21.39■■□□□ 1.01
SCR1SCR1 THI12P42883 340 aa21.2■□□□□ 0.98
SCR1SCR1 THI5P43534 340 aa21.2■□□□□ 0.98
SCR1SCR1 THI11P47183 340 aa21.2■□□□□ 0.98
SCR1SCR1 THI13Q07748 340 aa21.2■□□□□ 0.98
SCR1SCR1 PDR11P40550 1411 aa21.2■□□□□ 0.98
SCR1SCR1 PAF1P38351 445 aa21.18■□□□□ 0.98
SCR1SCR1 RAV1P47104 1357 aa21.09■□□□□ 0.97
SCR1SCR1 MRX12P47084 519 aa21.06■□□□□ 0.96
SCR1SCR1 BFR2Q06631 534 aaKnown RBP21.02■□□□□ 0.96
SCR1SCR1 CFT1Q06632 1357 aaKnown RBP21■□□□□ 0.95
SCR1SCR1 KRE5P22023 1365 aa20.99■□□□□ 0.95
SCR1SCR1 BCK1Q01389 1478 aa20.98■□□□□ 0.95
SCR1SCR1 RIA1P53893 1110 aa20.97■□□□□ 0.95
SCR1SCR1 RTC1Q08281 1341 aa20.96■□□□□ 0.95
SCR1SCR1 NOP7P53261 605 aaKnown RBP20.95■□□□□ 0.94
SCR1SCR1 YNR029CP53729 429 aaKnown RBP20.86■□□□□ 0.93
SCR1SCR1 ALD4P46367 519 aaKnown RBP20.85■□□□□ 0.93
SCR1SCR1 NUP192P47054 1683 aa20.83■□□□□ 0.92
SCR1SCR1 CAB1Q04430 367 aa20.81■□□□□ 0.92
SCR1SCR1 RAD9P14737 1309 aa20.78■□□□□ 0.92
SCR1SCR1 NAP1P25293 417 aaKnown RBP20.73■□□□□ 0.91
SCR1SCR1 YAH1Q12184 172 aaKnown RBP20.71■□□□□ 0.91
SCR1SCR1 PTP3P40048 928 aa20.68■□□□□ 0.9
SCR1SCR1 ESL2P36168 1195 aa20.67■□□□□ 0.9
SCR1SCR1 TY3B-IQ7LHG5 1498 aaKnown RBP20.55■□□□□ 0.88
SCR1SCR1 TAF5P38129 798 aa20.54■□□□□ 0.88
SCR1SCR1 TAF8Q03750 510 aa20.53■□□□□ 0.88
SCR1SCR1 APP1P53933 587 aa20.48■□□□□ 0.87
SCR1SCR1 CPS1P27614 576 aa20.43■□□□□ 0.86
SCR1SCR1 YIL055CP40523 627 aaKnown RBP20.4■□□□□ 0.86
SCR1SCR1 REB1P21538 810 aa20.38■□□□□ 0.85
SCR1SCR1 RCM1P53972 490 aa20.38■□□□□ 0.85
SCR1SCR1 ENT1Q12518 454 aa20.35■□□□□ 0.85
SCR1SCR1 SPE2P21182 396 aa20.31■□□□□ 0.84
SCR1SCR1 GLN1P32288 370 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms