RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 RAB3GAP2Q9H2M9 1393 aa24.65■■□□□ 1.54
PHGDH-223ENST00000641597 CLSPNQ9HAW4 1339 aa24.64■■□□□ 1.54
PHGDH-223ENST00000641597 FHOD3Q2V2M9 1422 aa24.64■■□□□ 1.54
PHGDH-223ENST00000641597 FAM50AQ14320 339 aaKnown RBP24.64■■□□□ 1.53
PHGDH-223ENST00000641597 POLA1P09884 1462 aaPredicted RBP24.63■■□□□ 1.53
PHGDH-223ENST00000641597 LRRC9Q6ZRR7 1453 aa24.61■■□□□ 1.53
PHGDH-223ENST00000641597 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
PHGDH-223ENST00000641597 PCF11O94913 1555 aaKnown RBP24.59■■□□□ 1.53
PHGDH-223ENST00000641597 DNMBPQ6XZF7 1577 aa24.56■■□□□ 1.52
PHGDH-223ENST00000641597 ABCA10Q8WWZ4 1543 aa24.52■■□□□ 1.52
PHGDH-223ENST00000641597 MAPKBP1O60336 1514 aa24.52■■□□□ 1.52
PHGDH-223ENST00000641597 SIN3AQ96ST3 1273 aa24.51■■□□□ 1.51
PHGDH-223ENST00000641597 TDRD9Q8NDG6 1382 aaKnown RBP24.5■■□□□ 1.51
PHGDH-223ENST00000641597 FHAD1B1AJZ9 1412 aa24.48■■□□□ 1.51
PHGDH-223ENST00000641597 MAP3K1Q13233 1512 aa24.48■■□□□ 1.51
PHGDH-223ENST00000641597 PELP1Q8IZL8 1130 aaKnown RBP24.47■■□□□ 1.51
PHGDH-223ENST00000641597 URB2Q14146 1524 aaKnown RBP24.46■■□□□ 1.51
PHGDH-223ENST00000641597 SETD5Q9C0A6 1442 aa24.46■■□□□ 1.51
PHGDH-223ENST00000641597 CFAP43Q8NDM7 1665 aa24.43■■□□□ 1.5
PHGDH-223ENST00000641597 KCNH8Q96L42 1107 aa24.38■■□□□ 1.49
PHGDH-223ENST00000641597 HIRIP3Q9BW71 556 aaPredicted RBP24.36■■□□□ 1.49
PHGDH-223ENST00000641597 CASKIN1Q8WXD9 1431 aa24.35■■□□□ 1.49
PHGDH-223ENST00000641597 FYCO1Q9BQS8 1478 aa24.34■■□□□ 1.49
PHGDH-223ENST00000641597 CTTNBP2Q8WZ74 1663 aa24.34■■□□□ 1.49
PHGDH-223ENST00000641597 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
PHGDH-223ENST00000641597 CUL7Q14999 1698 aa24.32■■□□□ 1.48
PHGDH-223ENST00000641597 EFCAB5A4FU69 1503 aa24.3■■□□□ 1.48
PHGDH-223ENST00000641597 SNAPC4Q5SXM2 1469 aa24.28■■□□□ 1.48
PHGDH-223ENST00000641597 GAPVD1Q14C86 1478 aa24.27■■□□□ 1.48
PHGDH-223ENST00000641597 LAMC3Q9Y6N6 1575 aa24.26■■□□□ 1.47
PHGDH-223ENST00000641597 MTUS2Q5JR59 1369 aa24.25■■□□□ 1.47
PHGDH-223ENST00000641597 LRRIQ1Q96JM4 1722 aa24.24■■□□□ 1.47
PHGDH-223ENST00000641597 PTPRKQ15262 1439 aa24.24■■□□□ 1.47
PHGDH-223ENST00000641597 ABCA5Q8WWZ7 1642 aa24.23■■□□□ 1.47
PHGDH-223ENST00000641597 DDX10Q13206 875 aaKnown RBP24.23■■□□□ 1.47
PHGDH-223ENST00000641597 FMN1Q68DA7 1419 aa24.22■■□□□ 1.47
PHGDH-223ENST00000641597 FGD6Q6ZV73 1430 aa24.22■■□□□ 1.47
PHGDH-223ENST00000641597 ARID3CA6NKF2 412 aa24.22■■□□□ 1.47
PHGDH-223ENST00000641597 KIF21AQ7Z4S6 1674 aa24.22■■□□□ 1.47
PHGDH-223ENST00000641597 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.471e-6■■□□□ 14.4
PHGDH-223ENST00000641597 PDS5BQ9NTI5 1447 aa24.16■■□□□ 1.46
PHGDH-223ENST00000641597 SAMD9Q5K651 1589 aa24.15■■□□□ 1.46
PHGDH-223ENST00000641597 NCOA2Q15596 1464 aa24.13■■□□□ 1.45
PHGDH-223ENST00000641597 GRIN2BQ13224 1484 aa24.11■■□□□ 1.45
PHGDH-223ENST00000641597 CCDC18Q5T9S5 1454 aa24.1■■□□□ 1.45
PHGDH-223ENST00000641597 PPP1R15AO75807 674 aaPredicted RBP24.1■■□□□ 1.45
PHGDH-223ENST00000641597 CHIC2Q9UKJ5 165 aa24.1■■□□□ 1.45
PHGDH-223ENST00000641597 MAGI3Q5TCQ9 1506 aa24.09■■□□□ 1.45
PHGDH-223ENST00000641597 TARBP1Q13395 1621 aaKnown RBP24.07■■□□□ 1.44
PHGDH-223ENST00000641597 RRP7BPQ9NSQ0 103 aa24.07■■□□□ 1.44
PHGDH-223ENST00000641597 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.07■■□□□ 1.44
PHGDH-223ENST00000641597 SUPT16HQ9Y5B9 1047 aaKnown RBP24.05■■□□□ 1.44
PHGDH-223ENST00000641597 MYOM3Q5VTT5 1437 aa24.05■■□□□ 1.44
PHGDH-223ENST00000641597 PTPN23Q9H3S7 1636 aa24.02■■□□□ 1.44
PHGDH-223ENST00000641597 HFM1A2PYH4 1435 aa24.02■■□□□ 1.44
PHGDH-223ENST00000641597 NAIPQ13075 1403 aa24.02■■□□□ 1.44
PHGDH-223ENST00000641597 TONSLQ96HA7 1378 aa23.99■■□□□ 1.43
PHGDH-223ENST00000641597 CDK13Q14004 1512 aaKnown RBP23.97■■□□□ 1.43
PHGDH-223ENST00000641597 SUPT6HQ7KZ85 1726 aaKnown RBP23.96■■□□□ 1.43
PHGDH-223ENST00000641597 UACAQ9BZF9 1416 aa23.96■■□□□ 1.43
PHGDH-223ENST00000641597 PBRM1Q86U86 1689 aa23.94■■□□□ 1.42
PHGDH-223ENST00000641597 EHBP1L1Q8N3D4 1523 aa23.94■■□□□ 1.42
PHGDH-223ENST00000641597 UGGT2Q9NYU1 1516 aa23.94■■□□□ 1.42
PHGDH-223ENST00000641597 TIMELESSQ9UNS1 1208 aa23.93■■□□□ 1.42
PHGDH-223ENST00000641597 ZNF608Q9ULD9 1512 aaPredicted RBP23.92■■□□□ 1.42
PHGDH-223ENST00000641597 FOXD1Q16676 465 aa23.9■■□□□ 1.42
PHGDH-223ENST00000641597 TRIM52Q96A61 297 aa23.9■■□□□ 1.42
PHGDH-223ENST00000641597 KDM6BO15054 1643 aa23.89■■□□□ 1.42
PHGDH-223ENST00000641597 IQGAP2Q13576 1575 aa23.89■■□□□ 1.41
PHGDH-223ENST00000641597 EPRSP07814 1512 aaKnown RBP23.88■■□□□ 1.41
PHGDH-223ENST00000641597 ARHGEF11O15085 1522 aa23.87■■□□□ 1.41
PHGDH-223ENST00000641597 THOC2Q8NI27 1593 aaKnown RBP23.87■■□□□ 1.41
PHGDH-223ENST00000641597 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
PHGDH-223ENST00000641597 BCANQ96GW7 911 aa23.86■■□□□ 1.41
PHGDH-223ENST00000641597 DENND4BO75064 1496 aaPredicted RBP23.85■■□□□ 1.41
PHGDH-223ENST00000641597 KDM5BQ9UGL1 1544 aa23.82■■□□□ 1.4
PHGDH-223ENST00000641597 ZNF644Q9H582 1327 aaPredicted RBP23.82■■□□□ 1.4
PHGDH-223ENST00000641597 HECW1Q76N89 1606 aa23.82■■□□□ 1.4
PHGDH-223ENST00000641597 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
PHGDH-223ENST00000641597 ANP32CO43423 234 aa23.79■■□□□ 1.4
PHGDH-223ENST00000641597 WDR62O43379 1518 aa23.77■■□□□ 1.4
PHGDH-223ENST00000641597 TCOF1Q13428 1488 aaKnown RBP23.75■■□□□ 1.39
PHGDH-223ENST00000641597 MPHOSPH9Q99550 1183 aa23.74■■□□□ 1.39
PHGDH-223ENST00000641597 FKBP8Q14318 412 aa23.72■■□□□ 1.39
PHGDH-223ENST00000641597 HSPA5P11021 654 aaKnown RBP23.7■■□□□ 1.38
PHGDH-223ENST00000641597 DISP1Q96F81 1524 aa23.7■■□□□ 1.38
PHGDH-223ENST00000641597 GCC2Q8IWJ2 1684 aa23.69■■□□□ 1.38
PHGDH-223ENST00000641597 L3MBTL2Q969R5 705 aa23.68■■□□□ 1.38
PHGDH-223ENST00000641597 FBLN2P98095 1184 aa23.67■■□□□ 1.38
PHGDH-223ENST00000641597 WASHC2AQ641Q2 1341 aa23.67■■□□□ 1.38
PHGDH-223ENST00000641597 NUP153P49790 1475 aaKnown RBP23.66■■□□□ 1.38
PHGDH-223ENST00000641597 CCER2I3L3R5 266 aa23.66■■□□□ 1.38
PHGDH-223ENST00000641597 KIAA0556O60303 1618 aa23.64■■□□□ 1.37
PHGDH-223ENST00000641597 MIA2Q96PC5 1412 aa23.64■■□□□ 1.37
PHGDH-223ENST00000641597 IFT140Q96RY7 1462 aa23.64■■□□□ 1.37
PHGDH-223ENST00000641597 C11orf95C9JLR9 678 aaPredicted RBP23.62■■□□□ 1.37
PHGDH-223ENST00000641597 TSHZ2Q9NRE2 1034 aa23.62■■□□□ 1.37
PHGDH-223ENST00000641597 DAPK1P53355 1430 aa23.62■■□□□ 1.37
PHGDH-223ENST00000641597 KIAA0586Q9BVV6 1533 aa23.62■■□□□ 1.37
PHGDH-223ENST00000641597 ABCC5O15440 1437 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms