RNA–Protein interactions for RNA: ENST00000641414.1

CASC19-228, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-228ENST00000641414 PCGF6Q9BYE7 350 aa10.31□□□□□ -0.76
CASC19-228ENST00000641414 PBRM1Q86U86 1689 aa10.31□□□□□ -0.76
CASC19-228ENST00000641414 ZNF608Q9ULD9 1512 aaPredicted RBP10.3□□□□□ -0.76
CASC19-228ENST00000641414 TRIM26Q12899 539 aaPredicted RBP10.3□□□□□ -0.76
CASC19-228ENST00000641414 APLP2Q06481 763 aa10.29□□□□□ -0.76
CASC19-228ENST00000641414 VPS8Q8N3P4 1428 aa10.29□□□□□ -0.76
CASC19-228ENST00000641414 FHAD1B1AJZ9 1412 aa10.28□□□□□ -0.76
CASC19-228ENST00000641414 PPARGC1BQ86YN6 1023 aaKnown RBP10.28□□□□□ -0.76
CASC19-228ENST00000641414 EIF4G3O43432 1585 aaKnown RBP10.27□□□□□ -0.77
CASC19-228ENST00000641414 CTTNBP2Q8WZ74 1663 aa10.26□□□□□ -0.77
CASC19-228ENST00000641414 ADAMTS12P58397 1594 aa10.25□□□□□ -0.77
CASC19-228ENST00000641414 ARHGAP35Q9NRY4 1499 aa10.24□□□□□ -0.77
CASC19-228ENST00000641414 SNAPC4Q5SXM2 1469 aa10.24□□□□□ -0.77
CASC19-228ENST00000641414 ARAP1Q96P48 1450 aa10.24□□□□□ -0.77
CASC19-228ENST00000641414 MAGI1Q96QZ7 1491 aaPredicted RBP10.22□□□□□ -0.77
CASC19-228ENST00000641414 TTBK1Q5TCY1 1321 aaPredicted RBP10.22□□□□□ -0.77
CASC19-228ENST00000641414 CHMP7Q8WUX9 453 aaPredicted RBP10.22□□□□□ -0.77
CASC19-228ENST00000641414 EFCAB5A4FU69 1503 aa10.21□□□□□ -0.78
CASC19-228ENST00000641414 FBLN2P98095 1184 aa10.2□□□□□ -0.78
CASC19-228ENST00000641414 P3H3Q8IVL6 736 aa10.2□□□□□ -0.78
CASC19-228ENST00000641414 SYNJ2O15056 1496 aa10.18□□□□□ -0.78
CASC19-228ENST00000641414 GRIN2AQ12879 1464 aa10.18□□□□□ -0.78
CASC19-228ENST00000641414 IQGAP2Q13576 1575 aa10.17□□□□□ -0.78
CASC19-228ENST00000641414 FHOD3Q2V2M9 1422 aa10.16□□□□□ -0.78
CASC19-228ENST00000641414 ATP1B4Q9UN42 357 aaPredicted RBP10.15□□□□□ -0.79
CASC19-228ENST00000641414 KIAA0586Q9BVV6 1533 aa10.14□□□□□ -0.79
CASC19-228ENST00000641414 FMN1Q68DA7 1419 aa10.14□□□□□ -0.79
CASC19-228ENST00000641414 SAMD9Q5K651 1589 aa10.13□□□□□ -0.79
CASC19-228ENST00000641414 FYCO1Q9BQS8 1478 aa10.1□□□□□ -0.79
CASC19-228ENST00000641414 PCF11O94913 1555 aaKnown RBP10.1□□□□□ -0.79
CASC19-228ENST00000641414 CEP170Q5SW79 1584 aa10.09□□□□□ -0.79
CASC19-228ENST00000641414 CASKIN1Q8WXD9 1431 aa10.09□□□□□ -0.79
CASC19-228ENST00000641414 UGGT2Q9NYU1 1516 aa10.09□□□□□ -0.79
CASC19-228ENST00000641414 NUP160Q12769 1436 aa10.09□□□□□ -0.79
CASC19-228ENST00000641414 KANK4Q5T7N3 995 aaPredicted RBP10.09□□□□□ -0.79
CASC19-228ENST00000641414 MAP3K1Q13233 1512 aa10.08□□□□□ -0.8
CASC19-228ENST00000641414 TIAM1Q13009 1591 aa10.07□□□□□ -0.8
CASC19-228ENST00000641414 CARMIL2Q6F5E8 1435 aa10.06□□□□□ -0.8
CASC19-228ENST00000641414 JPH4Q96JJ6 628 aa10.06□□□□□ -0.8
CASC19-228ENST00000641414 KIAA0556O60303 1618 aa10.05□□□□□ -0.8
CASC19-228ENST00000641414 CHD1O14646 1710 aa10.04□□□□□ -0.8
CASC19-228ENST00000641414 DISP1Q96F81 1524 aa10.04□□□□□ -0.8
CASC19-228ENST00000641414 CFAP43Q8NDM7 1665 aa10.04□□□□□ -0.8
CASC19-228ENST00000641414 LRRC9Q6ZRR7 1453 aa10.03□□□□□ -0.8
CASC19-228ENST00000641414 HECW1Q76N89 1606 aa10.02□□□□□ -0.81
CASC19-228ENST00000641414 MTUS2Q5JR59 1369 aa10.01□□□□□ -0.81
CASC19-228ENST00000641414 CCDC18Q5T9S5 1454 aa10.01□□□□□ -0.81
CASC19-228ENST00000641414 HRCP23327 699 aa10□□□□□ -0.81
CASC19-228ENST00000641414 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
CASC19-228ENST00000641414 PPP4R3CPQ6ZMV5 832 aa9.99□□□□□ -0.81
CASC19-228ENST00000641414 PRG4Q92954 1404 aaPredicted RBP9.98□□□□□ -0.81
CASC19-228ENST00000641414 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.97□□□□□ -0.81
CASC19-228ENST00000641414 CCNB3Q8WWL7 1395 aa9.97□□□□□ -0.81
CASC19-228ENST00000641414 EPRSP07814 1512 aaKnown RBP9.97□□□□□ -0.81
CASC19-228ENST00000641414 ARID3CA6NKF2 412 aa9.96□□□□□ -0.81
CASC19-228ENST00000641414 RAPGEF6Q8TEU7 1601 aa9.96□□□□□ -0.81
CASC19-228ENST00000641414 SCAF1Q9H7N4 1312 aaKnown RBP9.96□□□□□ -0.81
CASC19-228ENST00000641414 LRRIQ1Q96JM4 1722 aa9.96□□□□□ -0.82
CASC19-228ENST00000641414 RRBP1Q9P2E9 1410 aaKnown RBP9.96□□□□□ -0.82
CASC19-228ENST00000641414 CDK11AQ9UQ88 783 aaPredicted RBP9.96□□□□□ -0.82
CASC19-228ENST00000641414 EHBP1L1Q8N3D4 1523 aa9.95□□□□□ -0.82
CASC19-228ENST00000641414 PHLDB1Q86UU1 1377 aa9.94□□□□□ -0.82
CASC19-228ENST00000641414 PTPRGP23470 1445 aa9.94□□□□□ -0.82
CASC19-228ENST00000641414 CDK13Q14004 1512 aaKnown RBP9.93□□□□□ -0.82
CASC19-228ENST00000641414 SUPT6HQ7KZ85 1726 aaKnown RBP9.93□□□□□ -0.82
CASC19-228ENST00000641414 NUP153P49790 1475 aaKnown RBP9.93□□□□□ -0.82
CASC19-228ENST00000641414 PLB1Q6P1J6 1458 aa9.93□□□□□ -0.82
CASC19-228ENST00000641414 SHROOM2Q13796 1616 aa9.93□□□□□ -0.82
CASC19-228ENST00000641414 ZEB1P37275 1124 aaPredicted RBP9.93□□□□□ -0.82
CASC19-228ENST00000641414 FAM50AQ14320 339 aaKnown RBP9.93□□□□□ -0.82
CASC19-228ENST00000641414 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
CASC19-228ENST00000641414 ITGAEP38570 1179 aa9.91□□□□□ -0.82
CASC19-228ENST00000641414 NCOA2Q15596 1464 aa9.91□□□□□ -0.82
CASC19-228ENST00000641414 CLASP1Q7Z460 1538 aa9.91□□□□□ -0.82
CASC19-228ENST00000641414 MAGI3Q5TCQ9 1506 aa9.89□□□□□ -0.83
CASC19-228ENST00000641414 OSCARQ8IYS5 282 aa9.89□□□□□ -0.83
CASC19-228ENST00000641414 ABCA8O94911 1581 aa9.88□□□□□ -0.83
CASC19-228ENST00000641414 MYOM3Q5VTT5 1437 aa9.88□□□□□ -0.83
CASC19-228ENST00000641414 FGD6Q6ZV73 1430 aa9.88□□□□□ -0.83
CASC19-228ENST00000641414 PLEKHD1A6NEE1 506 aa9.87□□□□□ -0.83
CASC19-228ENST00000641414 UACAQ9BZF9 1416 aa9.87□□□□□ -0.83
CASC19-228ENST00000641414 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.86□□□□□ -0.83
CASC19-228ENST00000641414 TROQ12816 1431 aaPredicted RBP9.86□□□□□ -0.83
CASC19-228ENST00000641414 ERCC6L2Q5T890 1561 aa9.85□□□□□ -0.83
CASC19-228ENST00000641414 ARHGEF11O15085 1522 aa9.85□□□□□ -0.83
CASC19-228ENST00000641414 MAPK8IP2Q13387 824 aaPredicted RBP9.84□□□□□ -0.83
CASC19-228ENST00000641414 ATP10BO94823 1461 aa9.84□□□□□ -0.83
CASC19-228ENST00000641414 MIA2Q96PC5 1412 aa9.83□□□□□ -0.84
CASC19-228ENST00000641414 PTPN23Q9H3S7 1636 aa9.82□□□□□ -0.84
CASC19-228ENST00000641414 ABCC2Q92887 1545 aa9.81□□□□□ -0.84
CASC19-228ENST00000641414 KIF14Q15058 1648 aa9.8□□□□□ -0.84
CASC19-228ENST00000641414 CFDP1Q9UEE9 299 aaPredicted RBP9.8□□□□□ -0.84
CASC19-228ENST00000641414 ADCY10Q96PN6 1610 aa9.79□□□□□ -0.84
CASC19-228ENST00000641414 TCOF1Q13428 1488 aaKnown RBP9.79□□□□□ -0.84
CASC19-228ENST00000641414 SETD5Q9C0A6 1442 aa9.79□□□□□ -0.84
CASC19-228ENST00000641414 ITSN2Q9NZM3 1697 aa9.79□□□□□ -0.84
CASC19-228ENST00000641414 UHRF1BP1LA0JNW5 1464 aa9.78□□□□□ -0.84
CASC19-228ENST00000641414 RAB3GAP2Q9H2M9 1393 aa9.77□□□□□ -0.85
CASC19-228ENST00000641414 ZNF777Q9ULD5 760 aaPredicted RBP9.77□□□□□ -0.85
CASC19-228ENST00000641414 GPATCH8Q9UKJ3 1502 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms