RNA–Protein interactions for RNA: ENST00000641316.1

AC116562.4-201, humanhuman

BASIC

Gene AC116562.4, Length 2,276 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116562.4-201ENST00000641316 LRRC9Q6ZRR7 1453 aa28.87■■■□□ 2.21
AC116562.4-201ENST00000641316 P3H3Q8IVL6 736 aa28.87■■■□□ 2.21
AC116562.4-201ENST00000641316 CENPBP07199 599 aaPredicted RBP28.85■■■□□ 2.21
AC116562.4-201ENST00000641316 ITGAEP38570 1179 aa28.85■■■□□ 2.21
AC116562.4-201ENST00000641316 URB2Q14146 1524 aaKnown RBP28.85■■■□□ 2.21
AC116562.4-201ENST00000641316 PCF11O94913 1555 aaKnown RBP28.85■■■□□ 2.21
AC116562.4-201ENST00000641316 CFAP43Q8NDM7 1665 aa28.81■■■□□ 2.2
AC116562.4-201ENST00000641316 FHOD3Q2V2M9 1422 aa28.8■■■□□ 2.2
AC116562.4-201ENST00000641316 WDR97A6NE52 1622 aa28.8■■■□□ 2.2
AC116562.4-201ENST00000641316 EFCAB5A4FU69 1503 aa28.78■■■□□ 2.2
AC116562.4-201ENST00000641316 CTTNBP2Q8WZ74 1663 aa28.77■■■□□ 2.2
AC116562.4-201ENST00000641316 PHLDB1Q86UU1 1377 aa28.76■■■□□ 2.19
AC116562.4-201ENST00000641316 ATP1B4Q9UN42 357 aaPredicted RBP28.74■■■□□ 2.19
AC116562.4-201ENST00000641316 MIER1Q8N108 512 aa28.73■■■□□ 2.19
AC116562.4-201ENST00000641316 FYCO1Q9BQS8 1478 aa28.71■■■□□ 2.19
AC116562.4-201ENST00000641316 PDS5BQ9NTI5 1447 aa28.71■■■□□ 2.19
AC116562.4-201ENST00000641316 RAB3GAP2Q9H2M9 1393 aa28.7■■■□□ 2.18
AC116562.4-201ENST00000641316 ABCA5Q8WWZ7 1642 aa28.69■■■□□ 2.18
AC116562.4-201ENST00000641316 TDRD9Q8NDG6 1382 aaKnown RBP28.69■■■□□ 2.18
AC116562.4-201ENST00000641316 CASKIN1Q8WXD9 1431 aa28.68■■■□□ 2.18
AC116562.4-201ENST00000641316 DNAJC5BQ9UF47 199 aa28.68■■■□□ 2.18
AC116562.4-201ENST00000641316 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.18
AC116562.4-201ENST00000641316 GAPVD1Q14C86 1478 aa28.64■■■□□ 2.17
AC116562.4-201ENST00000641316 FAM50AQ14320 339 aaKnown RBP28.63■■■□□ 2.17
AC116562.4-201ENST00000641316 KIF21AQ7Z4S6 1674 aa28.62■■■□□ 2.17
AC116562.4-201ENST00000641316 SETD5Q9C0A6 1442 aa28.61■■■□□ 2.17
AC116562.4-201ENST00000641316 YTHDC1Q96MU7 727 aaKnown RBP28.59■■■□□ 2.17
AC116562.4-201ENST00000641316 GTF3C3Q9Y5Q9 886 aa28.59■■■□□ 2.17
AC116562.4-201ENST00000641316 FMN1Q68DA7 1419 aa28.59■■■□□ 2.17
AC116562.4-201ENST00000641316 MAPKBP1O60336 1514 aa28.56■■■□□ 2.16
AC116562.4-201ENST00000641316 SNAPC4Q5SXM2 1469 aa28.54■■■□□ 2.16
AC116562.4-201ENST00000641316 SAMD9Q5K651 1589 aa28.53■■■□□ 2.16
AC116562.4-201ENST00000641316 TARBP1Q13395 1621 aaKnown RBP28.49■■■□□ 2.15
AC116562.4-201ENST00000641316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.45■■■□□ 2.15
AC116562.4-201ENST00000641316 MTUS2Q5JR59 1369 aa28.41■■■□□ 2.14
AC116562.4-201ENST00000641316 LRRIQ1Q96JM4 1722 aa28.4■■■□□ 2.14
AC116562.4-201ENST00000641316 FGD6Q6ZV73 1430 aa28.4■■■□□ 2.14
AC116562.4-201ENST00000641316 GRIN2BQ13224 1484 aa28.39■■■□□ 2.14
AC116562.4-201ENST00000641316 PBRM1Q86U86 1689 aa28.36■■■□□ 2.13
AC116562.4-201ENST00000641316 THOC2Q8NI27 1593 aaKnown RBP28.34■■■□□ 2.13
AC116562.4-201ENST00000641316 SIN3AQ96ST3 1273 aa28.31■■■□□ 2.12
AC116562.4-201ENST00000641316 NCOA2Q15596 1464 aa28.29■■■□□ 2.12
AC116562.4-201ENST00000641316 MRC2Q9UBG0 1479 aa28.29■■■□□ 2.12
AC116562.4-201ENST00000641316 PELP1Q8IZL8 1130 aaKnown RBP28.26■■■□□ 2.11
AC116562.4-201ENST00000641316 EHBP1L1Q8N3D4 1523 aa28.26■■■□□ 2.11
AC116562.4-201ENST00000641316 SUPT6HQ7KZ85 1726 aaKnown RBP28.26■■■□□ 2.11
AC116562.4-201ENST00000641316 ADAMTS12P58397 1594 aa28.25■■■□□ 2.11
AC116562.4-201ENST00000641316 MYOM3Q5VTT5 1437 aa28.25■■■□□ 2.11
AC116562.4-201ENST00000641316 PTPRKQ15262 1439 aa28.22■■■□□ 2.11
AC116562.4-201ENST00000641316 IQGAP2Q13576 1575 aa28.22■■■□□ 2.11
AC116562.4-201ENST00000641316 CCDC18Q5T9S5 1454 aa28.19■■■□□ 2.1
AC116562.4-201ENST00000641316 MAGI3Q5TCQ9 1506 aa28.18■■■□□ 2.1
AC116562.4-201ENST00000641316 TIMELESSQ9UNS1 1208 aa28.18■■■□□ 2.1
AC116562.4-201ENST00000641316 HFM1A2PYH4 1435 aa28.18■■■□□ 2.1
AC116562.4-201ENST00000641316 UGGT2Q9NYU1 1516 aa28.17■■■□□ 2.1
AC116562.4-201ENST00000641316 HECW1Q76N89 1606 aa28.16■■■□□ 2.1
AC116562.4-201ENST00000641316 PTPN23Q9H3S7 1636 aa28.16■■■□□ 2.1
AC116562.4-201ENST00000641316 ARHGEF11O15085 1522 aa28.14■■■□□ 2.1
AC116562.4-201ENST00000641316 IFT140Q96RY7 1462 aa28.1■■■□□ 2.09
AC116562.4-201ENST00000641316 NAIPQ13075 1403 aa28.1■■■□□ 2.09
AC116562.4-201ENST00000641316 ZNF608Q9ULD9 1512 aaPredicted RBP28.1■■■□□ 2.09
AC116562.4-201ENST00000641316 UACAQ9BZF9 1416 aa28.09■■■□□ 2.09
AC116562.4-201ENST00000641316 EPRSP07814 1512 aaKnown RBP28.08■■■□□ 2.09
AC116562.4-201ENST00000641316 PPP1R15AO75807 674 aaPredicted RBP28.06■■■□□ 2.08
AC116562.4-201ENST00000641316 WDR62O43379 1518 aa28.06■■■□□ 2.08
AC116562.4-201ENST00000641316 CDK13Q14004 1512 aaKnown RBP28.03■■■□□ 2.08
AC116562.4-201ENST00000641316 TCOF1Q13428 1488 aaKnown RBP28.02■■■□□ 2.08
AC116562.4-201ENST00000641316 TONSLQ96HA7 1378 aa27.98■■■□□ 2.07
AC116562.4-201ENST00000641316 ARID3CA6NKF2 412 aa27.97■■■□□ 2.07
AC116562.4-201ENST00000641316 KIAA0586Q9BVV6 1533 aa27.95■■■□□ 2.06
AC116562.4-201ENST00000641316 DDX10Q13206 875 aaKnown RBP27.95■■■□□ 2.06
AC116562.4-201ENST00000641316 RRP7BPQ9NSQ0 103 aa27.94■■■□□ 2.06
AC116562.4-201ENST00000641316 CHIC2Q9UKJ5 165 aa27.93■■■□□ 2.06
AC116562.4-201ENST00000641316 KIAA0556O60303 1618 aa27.93■■■□□ 2.06
AC116562.4-201ENST00000641316 EIF4G3O43432 1585 aaKnown RBP27.92■■■□□ 2.06
AC116562.4-201ENST00000641316 MIA2Q96PC5 1412 aa27.92■■■□□ 2.06
AC116562.4-201ENST00000641316 GCC2Q8IWJ2 1684 aa27.91■■■□□ 2.06
AC116562.4-201ENST00000641316 DISP1Q96F81 1524 aa27.91■■■□□ 2.06
AC116562.4-201ENST00000641316 HIRIP3Q9BW71 556 aaPredicted RBP27.9■■■□□ 2.06
AC116562.4-201ENST00000641316 GRIN2AQ12879 1464 aa27.89■■■□□ 2.06
AC116562.4-201ENST00000641316 KCNH8Q96L42 1107 aa27.87■■■□□ 2.05
AC116562.4-201ENST00000641316 AKNAQ7Z591 1439 aa27.87■■■□□ 2.05
AC116562.4-201ENST00000641316 ERCC6Q03468 1493 aa27.83■■■□□ 2.05
AC116562.4-201ENST00000641316 KDM6BO15054 1643 aa27.82■■■□□ 2.04
AC116562.4-201ENST00000641316 NUP153P49790 1475 aaKnown RBP27.82■■■□□ 2.04
AC116562.4-201ENST00000641316 RAPGEF6Q8TEU7 1601 aa27.8■■■□□ 2.04
AC116562.4-201ENST00000641316 TRIM52Q96A61 297 aa27.8■■■□□ 2.04
AC116562.4-201ENST00000641316 DENND4BO75064 1496 aaPredicted RBP27.78■■■□□ 2.04
AC116562.4-201ENST00000641316 KDM5BQ9UGL1 1544 aa27.78■■■□□ 2.04
AC116562.4-201ENST00000641316 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.03
AC116562.4-201ENST00000641316 DAPK1P53355 1430 aa27.72■■■□□ 2.03
AC116562.4-201ENST00000641316 CEP170Q5SW79 1584 aa27.72■■■□□ 2.03
AC116562.4-201ENST00000641316 CHMP7Q8WUX9 453 aaPredicted RBP27.71■■■□□ 2.03
AC116562.4-201ENST00000641316 CDK11AQ9UQ88 783 aaPredicted RBP27.7■■■□□ 2.03
AC116562.4-201ENST00000641316 SYNJ2O15056 1496 aa27.7■■■□□ 2.02
AC116562.4-201ENST00000641316 MPHOSPH9Q99550 1183 aa27.69■■■□□ 2.02
AC116562.4-201ENST00000641316 DNMT1P26358 1616 aaKnown RBP27.69■■■□□ 2.02
AC116562.4-201ENST00000641316 ABCC5O15440 1437 aa27.67■■■□□ 2.02
AC116562.4-201ENST00000641316 ROCK1Q13464 1354 aa27.67■■■□□ 2.02
AC116562.4-201ENST00000641316 ZNF644Q9H582 1327 aaPredicted RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms