RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 KIAA0586Q9BVV6 1533 aa24.98■■□□□ 1.59
PAX6-268ENST00000640287 GOLGA3Q08378 1498 aa24.91■■□□□ 1.58
PAX6-268ENST00000640287 JPH4Q96JJ6 628 aa24.9■■□□□ 1.58
PAX6-268ENST00000640287 IQGAP2Q13576 1575 aa24.9■■□□□ 1.58
PAX6-268ENST00000640287 CTTNBP2Q8WZ74 1663 aa24.88■■□□□ 1.57
PAX6-268ENST00000640287 ARHGEF11O15085 1522 aa24.88■■□□□ 1.57
PAX6-268ENST00000640287 UBTFP17480 764 aaKnown RBP24.88■■□□□ 1.57
PAX6-268ENST00000640287 SHROOM2Q13796 1616 aa24.86■■□□□ 1.57
PAX6-268ENST00000640287 PRG4Q92954 1404 aaPredicted RBP24.84■■□□□ 1.57
PAX6-268ENST00000640287 RIMBP3CA6NJZ7 1639 aa24.84■■□□□ 1.57
PAX6-268ENST00000640287 RIMBP3BA6NNM3 1639 aa24.84■■□□□ 1.57
PAX6-268ENST00000640287 RIMBP3Q9UFD9 1639 aa24.84■■□□□ 1.57
PAX6-268ENST00000640287 ERCC6L2Q5T890 1561 aa24.78■■□□□ 1.56
PAX6-268ENST00000640287 RANGAP1P46060 587 aaPredicted RBP24.77■■□□□ 1.56
PAX6-268ENST00000640287 UGGT2Q9NYU1 1516 aa24.75■■□□□ 1.55
PAX6-268ENST00000640287 CARMIL2Q6F5E8 1435 aa24.74■■□□□ 1.55
PAX6-268ENST00000640287 ARAP1Q96P48 1450 aa24.69■■□□□ 1.54
PAX6-268ENST00000640287 CYB5RLQ6IPT4 315 aa24.69■■□□□ 1.54
PAX6-268ENST00000640287 DISP1Q96F81 1524 aa24.68■■□□□ 1.54
PAX6-268ENST00000640287 TTBK1Q5TCY1 1321 aaPredicted RBP24.67■■□□□ 1.54
PAX6-268ENST00000640287 KIAA0556O60303 1618 aa24.65■■□□□ 1.54
PAX6-268ENST00000640287 LOC105371045A0A1W2PR82 267 aa24.65■■□□□ 1.54
PAX6-268ENST00000640287 TNIKQ9UKE5 1360 aa24.62■■□□□ 1.53
PAX6-268ENST00000640287 P3H3Q8IVL6 736 aa24.62■■□□□ 1.53
PAX6-268ENST00000640287 PTPRGP23470 1445 aa24.59■■□□□ 1.53
PAX6-268ENST00000640287 SAMD9Q5K651 1589 aa24.58■■□□□ 1.52
PAX6-268ENST00000640287 EFCAB5A4FU69 1503 aa24.56■■□□□ 1.52
PAX6-268ENST00000640287 FHOD3Q2V2M9 1422 aa24.51■■□□□ 1.51
PAX6-268ENST00000640287 CLIP1P30622 1438 aa24.49■■□□□ 1.51
PAX6-268ENST00000640287 ARHGAP35Q9NRY4 1499 aa24.48■■□□□ 1.51
PAX6-268ENST00000640287 CEP162Q5TB80 1403 aa24.45■■□□□ 1.5
PAX6-268ENST00000640287 UACAQ9BZF9 1416 aa24.42■■□□□ 1.5
PAX6-268ENST00000640287 PLB1Q6P1J6 1458 aa24.4■■□□□ 1.5
PAX6-268ENST00000640287 ADCY10Q96PN6 1610 aa24.38■■□□□ 1.49
PAX6-268ENST00000640287 NPM1P06748 294 aaKnown RBP eCLIP24.37■■□□□ 1.49
PAX6-268ENST00000640287 ABCC2Q92887 1545 aa24.36■■□□□ 1.49
PAX6-268ENST00000640287 FMN1Q68DA7 1419 aa24.35■■□□□ 1.49
PAX6-268ENST00000640287 ABCA8O94911 1581 aa24.34■■□□□ 1.49
PAX6-268ENST00000640287 UHRF1BP1LA0JNW5 1464 aa24.34■■□□□ 1.49
PAX6-268ENST00000640287 RAPGEF6Q8TEU7 1601 aa24.3■■□□□ 1.48
PAX6-268ENST00000640287 ARID3CA6NKF2 412 aa24.28■■□□□ 1.48
PAX6-268ENST00000640287 ATP1B4Q9UN42 357 aaPredicted RBP24.28■■□□□ 1.48
PAX6-268ENST00000640287 KDM5BQ9UGL1 1544 aa24.22■■□□□ 1.47
PAX6-268ENST00000640287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.21■■□□□ 1.47
PAX6-268ENST00000640287 HNRNPUL2Q1KMD3 747 aaKnown RBP24.21■■□□□ 1.47
PAX6-268ENST00000640287 NUP153P49790 1475 aaKnown RBP24.21■■□□□ 1.47
PAX6-268ENST00000640287 ZCCHC11Q5TAX3 1644 aaKnown RBP24.2■■□□□ 1.46
PAX6-268ENST00000640287 HECW1Q76N89 1606 aa24.19■■□□□ 1.46
PAX6-268ENST00000640287 PCF11O94913 1555 aaKnown RBP24.18■■□□□ 1.46
PAX6-268ENST00000640287 CASKIN1Q8WXD9 1431 aa24.18■■□□□ 1.46
PAX6-268ENST00000640287 MAPKBP1O60336 1514 aa24.16■■□□□ 1.46
PAX6-268ENST00000640287 ATP10BO94823 1461 aa24.16■■□□□ 1.46
PAX6-268ENST00000640287 FYCO1Q9BQS8 1478 aa24.14■■□□□ 1.46
PAX6-268ENST00000640287 ASXL2Q76L83 1435 aa24.13■■□□□ 1.45
PAX6-268ENST00000640287 VPS8Q8N3P4 1428 aa24.12■■□□□ 1.45
PAX6-268ENST00000640287 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
PAX6-268ENST00000640287 EPRSP07814 1512 aaKnown RBP24.1■■□□□ 1.45
PAX6-268ENST00000640287 CDK13Q14004 1512 aaKnown RBP24.1■■□□□ 1.45
PAX6-268ENST00000640287 CCDC18Q5T9S5 1454 aa24.06■■□□□ 1.44
PAX6-268ENST00000640287 WDR7Q9Y4E6 1490 aa24.06■■□□□ 1.44
PAX6-268ENST00000640287 PLEKHD1A6NEE1 506 aa24.04■■□□□ 1.44
PAX6-268ENST00000640287 LRRIQ1Q96JM4 1722 aa24.02■■□□□ 1.44
PAX6-268ENST00000640287 KCNH8Q96L42 1107 aa24.02■■□□□ 1.44
PAX6-268ENST00000640287 CDK11AQ9UQ88 783 aaPredicted RBP24.02■■□□□ 1.44
PAX6-268ENST00000640287 ABCC10Q5T3U5 1492 aa24.02■■□□□ 1.43
PAX6-268ENST00000640287 FAM69CQ0P6D2 419 aa24.01■■□□□ 1.43
PAX6-268ENST00000640287 DIP2BQ9P265 1576 aa23.98■■□□□ 1.43
PAX6-268ENST00000640287 APLP2Q06481 763 aa23.94■■□□□ 1.42
PAX6-268ENST00000640287 KIF13AQ9H1H9 1805 aa23.92■■□□□ 1.42
PAX6-268ENST00000640287 TROQ12816 1431 aaPredicted RBP23.91■■□□□ 1.42
PAX6-268ENST00000640287 GLI2P10070 1586 aa23.9■■□□□ 1.42
PAX6-268ENST00000640287 MTUS2Q5JR59 1369 aa23.89■■□□□ 1.41
PAX6-268ENST00000640287 CFAP43Q8NDM7 1665 aa23.88■■□□□ 1.41
PAX6-268ENST00000640287 TIAM1Q13009 1591 aa23.88■■□□□ 1.41
PAX6-268ENST00000640287 MAGI3Q5TCQ9 1506 aa23.86■■□□□ 1.41
PAX6-268ENST00000640287 KIF14Q15058 1648 aa23.85■■□□□ 1.41
PAX6-268ENST00000640287 CD109Q6YHK3 1445 aa23.81■■□□□ 1.4
PAX6-268ENST00000640287 MAP3K1Q13233 1512 aa23.81■■□□□ 1.4
PAX6-268ENST00000640287 EHBP1L1Q8N3D4 1523 aa23.81■■□□□ 1.4
PAX6-268ENST00000640287 ABCA9Q8IUA7 1624 aa23.81■■□□□ 1.4
PAX6-268ENST00000640287 MAP3K4Q9Y6R4 1608 aa23.81■■□□□ 1.4
PAX6-268ENST00000640287 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.8■■□□□ 1.4
PAX6-268ENST00000640287 TSPOAP1O95153 1857 aa23.79■■□□□ 1.4
PAX6-268ENST00000640287 TTC37Q6PGP7 1564 aa23.78■■□□□ 1.4
PAX6-268ENST00000640287 LRRC9Q6ZRR7 1453 aa23.78■■□□□ 1.4
PAX6-268ENST00000640287 KANK4Q5T7N3 995 aaPredicted RBP23.75■■□□□ 1.39
PAX6-268ENST00000640287 TEX14Q8IWB6 1497 aa23.72■■□□□ 1.39
PAX6-268ENST00000640287 SUPT6HQ7KZ85 1726 aaKnown RBP23.7■■□□□ 1.39
PAX6-268ENST00000640287 PPRC1Q5VV67 1664 aaKnown RBP23.69■■□□□ 1.38
PAX6-268ENST00000640287 MYO5CQ9NQX4 1742 aa23.68■■□□□ 1.38
PAX6-268ENST00000640287 CCNB3Q8WWL7 1395 aa23.68■■□□□ 1.38
PAX6-268ENST00000640287 NCOA2Q15596 1464 aa23.67■■□□□ 1.38
PAX6-268ENST00000640287 PLCH2O75038 1416 aa23.67■■□□□ 1.38
PAX6-268ENST00000640287 ARHGAP5Q13017 1502 aa23.64■■□□□ 1.37
PAX6-268ENST00000640287 FANCAO15360 1455 aa23.63■■□□□ 1.37
PAX6-268ENST00000640287 PPARGC1BQ86YN6 1023 aaKnown RBP23.62■■□□□ 1.37
PAX6-268ENST00000640287 EFCAB2Q5VUJ9 269 aa23.62■■□□□ 1.37
PAX6-268ENST00000640287 GPATCH8Q9UKJ3 1502 aaKnown RBP23.61■■□□□ 1.37
PAX6-268ENST00000640287 PREX2Q70Z35 1606 aa23.61■■□□□ 1.37
PAX6-268ENST00000640287 ARAP3Q8WWN8 1544 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms