RNA–Protein interactions for RNA: ENST00000640242.1

PAX6-266, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-266ENST00000640242 NPM3O75607 178 aaKnown RBP18.32■□□□□ 0.52
PAX6-266ENST00000640242 DCAF8L1A6NGE4 600 aa18.31■□□□□ 0.52
PAX6-266ENST00000640242 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
PAX6-266ENST00000640242 THOC2Q8NI27 1593 aaKnown RBP18.26■□□□□ 0.51
PAX6-266ENST00000640242 CLIP1P30622 1438 aa18.26■□□□□ 0.51
PAX6-266ENST00000640242 PBRM1Q86U86 1689 aa18.26■□□□□ 0.51
PAX6-266ENST00000640242 GAPVD1Q14C86 1478 aa18.25■□□□□ 0.51
PAX6-266ENST00000640242 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
PAX6-266ENST00000640242 CTTNBP2Q8WZ74 1663 aa18.21■□□□□ 0.51
PAX6-266ENST00000640242 TRIM26Q12899 539 aaPredicted RBP18.17■□□□□ 0.5
PAX6-266ENST00000640242 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
PAX6-266ENST00000640242 VPS8Q8N3P4 1428 aa18.13■□□□□ 0.49
PAX6-266ENST00000640242 GRIN2BQ13224 1484 aa18.11■□□□□ 0.49
PAX6-266ENST00000640242 PCGF6Q9BYE7 350 aa18.08■□□□□ 0.48
PAX6-266ENST00000640242 ADAMTS12P58397 1594 aa18.08■□□□□ 0.48
PAX6-266ENST00000640242 EIF4G3O43432 1585 aaKnown RBP18.07■□□□□ 0.48
PAX6-266ENST00000640242 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
PAX6-266ENST00000640242 AQRO60306 1485 aaKnown RBP eCLIP18.05■□□□□ 0.48
PAX6-266ENST00000640242 EFCAB5A4FU69 1503 aa18.04■□□□□ 0.48
PAX6-266ENST00000640242 ARAP1Q96P48 1450 aa18.04■□□□□ 0.48
PAX6-266ENST00000640242 APLP2Q06481 763 aa18.03■□□□□ 0.48
PAX6-266ENST00000640242 ARHGAP35Q9NRY4 1499 aa18.02■□□□□ 0.48
PAX6-266ENST00000640242 RANGAP1P46060 587 aaPredicted RBP18.02■□□□□ 0.48
PAX6-266ENST00000640242 ZNF608Q9ULD9 1512 aaPredicted RBP18.01■□□□□ 0.47
PAX6-266ENST00000640242 MAGI1Q96QZ7 1491 aaPredicted RBP17.98■□□□□ 0.47
PAX6-266ENST00000640242 SNAPC4Q5SXM2 1469 aa17.93■□□□□ 0.46
PAX6-266ENST00000640242 IQGAP2Q13576 1575 aa17.91■□□□□ 0.46
PAX6-266ENST00000640242 SAMD9Q5K651 1589 aa17.91■□□□□ 0.46
PAX6-266ENST00000640242 PPARGC1BQ86YN6 1023 aaKnown RBP17.88■□□□□ 0.45
PAX6-266ENST00000640242 SLC4A1APQ9BWU0 796 aaKnown RBP17.88■□□□□ 0.45
PAX6-266ENST00000640242 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
PAX6-266ENST00000640242 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
PAX6-266ENST00000640242 MAP3K1Q13233 1512 aa17.88■□□□□ 0.45
PAX6-266ENST00000640242 FMN1Q68DA7 1419 aa17.85■□□□□ 0.45
PAX6-266ENST00000640242 KIAA0586Q9BVV6 1533 aa17.82■□□□□ 0.44
PAX6-266ENST00000640242 CFAP43Q8NDM7 1665 aa17.82■□□□□ 0.44
PAX6-266ENST00000640242 FYCO1Q9BQS8 1478 aa17.82■□□□□ 0.44
PAX6-266ENST00000640242 PCF11O94913 1555 aaKnown RBP17.81■□□□□ 0.44
PAX6-266ENST00000640242 UGGT2Q9NYU1 1516 aa17.81■□□□□ 0.44
PAX6-266ENST00000640242 TIAM1Q13009 1591 aa17.8■□□□□ 0.44
PAX6-266ENST00000640242 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
PAX6-266ENST00000640242 FHOD3Q2V2M9 1422 aa17.8■□□□□ 0.44
PAX6-266ENST00000640242 CASKIN1Q8WXD9 1431 aa17.78■□□□□ 0.44
PAX6-266ENST00000640242 P3H3Q8IVL6 736 aa17.75■□□□□ 0.43
PAX6-266ENST00000640242 CEP170Q5SW79 1584 aa17.74■□□□□ 0.43
PAX6-266ENST00000640242 TTBK1Q5TCY1 1321 aaPredicted RBP17.73■□□□□ 0.43
PAX6-266ENST00000640242 CHD1O14646 1710 aa17.73■□□□□ 0.43
PAX6-266ENST00000640242 NUP160Q12769 1436 aa17.72■□□□□ 0.43
PAX6-266ENST00000640242 KIAA0556O60303 1618 aa17.72■□□□□ 0.43
PAX6-266ENST00000640242 HECW1Q76N89 1606 aa17.69■□□□□ 0.42
PAX6-266ENST00000640242 FBLN2P98095 1184 aa17.68■□□□□ 0.42
PAX6-266ENST00000640242 LRRC9Q6ZRR7 1453 aa17.68■□□□□ 0.42
PAX6-266ENST00000640242 HRCP23327 699 aa17.67■□□□□ 0.42
PAX6-266ENST00000640242 LRRIQ1Q96JM4 1722 aa17.67■□□□□ 0.42
PAX6-266ENST00000640242 CCDC18Q5T9S5 1454 aa17.66■□□□□ 0.42
PAX6-266ENST00000640242 KANK4Q5T7N3 995 aaPredicted RBP17.65■□□□□ 0.42
PAX6-266ENST00000640242 CARMIL2Q6F5E8 1435 aa17.64■□□□□ 0.42
PAX6-266ENST00000640242 DISP1Q96F81 1524 aa17.64■□□□□ 0.41
PAX6-266ENST00000640242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.41
PAX6-266ENST00000640242 ATP1B4Q9UN42 357 aaPredicted RBP17.64■□□□□ 0.41
PAX6-266ENST00000640242 RRBP1Q9P2E9 1410 aaKnown RBP17.59■□□□□ 0.41
PAX6-266ENST00000640242 ZEB1P37275 1124 aaPredicted RBP17.59■□□□□ 0.41
PAX6-266ENST00000640242 RNF39Q9H2S5 420 aa17.59■□□□□ 0.41
PAX6-266ENST00000640242 SUPT6HQ7KZ85 1726 aaKnown RBP17.58■□□□□ 0.41
PAX6-266ENST00000640242 RAPGEF6Q8TEU7 1601 aa17.58■□□□□ 0.41
PAX6-266ENST00000640242 JPH4Q96JJ6 628 aa17.57■□□□□ 0.4
PAX6-266ENST00000640242 EHBP1L1Q8N3D4 1523 aa17.57■□□□□ 0.4
PAX6-266ENST00000640242 SHROOM2Q13796 1616 aa17.54■□□□□ 0.4
PAX6-266ENST00000640242 MTUS2Q5JR59 1369 aa17.54■□□□□ 0.4
PAX6-266ENST00000640242 EPRSP07814 1512 aaKnown RBP17.53■□□□□ 0.4
PAX6-266ENST00000640242 CCNB3Q8WWL7 1395 aa17.53■□□□□ 0.4
PAX6-266ENST00000640242 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.39
PAX6-266ENST00000640242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.45■□□□□ 0.38
PAX6-266ENST00000640242 CACNB1Q02641 598 aaPredicted RBP17.45■□□□□ 0.38
PAX6-266ENST00000640242 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
PAX6-266ENST00000640242 CDK11AQ9UQ88 783 aaPredicted RBP17.45■□□□□ 0.38
PAX6-266ENST00000640242 NUP153P49790 1475 aaKnown RBP17.44■□□□□ 0.38
PAX6-266ENST00000640242 PHLDB1Q86UU1 1377 aa17.44■□□□□ 0.38
PAX6-266ENST00000640242 CLASP1Q7Z460 1538 aa17.44■□□□□ 0.38
PAX6-266ENST00000640242 ABCA8O94911 1581 aa17.43■□□□□ 0.38
PAX6-266ENST00000640242 NCOA2Q15596 1464 aa17.43■□□□□ 0.38
PAX6-266ENST00000640242 CDK13Q14004 1512 aaKnown RBP17.42■□□□□ 0.38
PAX6-266ENST00000640242 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
PAX6-266ENST00000640242 CCER1Q8TC90 406 aaPredicted RBP17.41■□□□□ 0.38
PAX6-266ENST00000640242 MAGI3Q5TCQ9 1506 aa17.4■□□□□ 0.38
PAX6-266ENST00000640242 MYOM3Q5VTT5 1437 aa17.39■□□□□ 0.38
PAX6-266ENST00000640242 FGD6Q6ZV73 1430 aa17.38■□□□□ 0.37
PAX6-266ENST00000640242 PLB1Q6P1J6 1458 aa17.38■□□□□ 0.37
PAX6-266ENST00000640242 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
PAX6-266ENST00000640242 PTPRGP23470 1445 aa17.38■□□□□ 0.37
PAX6-266ENST00000640242 ADCY10Q96PN6 1610 aa17.37■□□□□ 0.37
PAX6-266ENST00000640242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
PAX6-266ENST00000640242 PTPN23Q9H3S7 1636 aa17.36■□□□□ 0.37
PAX6-266ENST00000640242 ITSN2Q9NZM3 1697 aa17.36■□□□□ 0.37
PAX6-266ENST00000640242 FAM50AQ14320 339 aaKnown RBP17.34■□□□□ 0.37
PAX6-266ENST00000640242 TROQ12816 1431 aaPredicted RBP17.32■□□□□ 0.36
PAX6-266ENST00000640242 MIA2Q96PC5 1412 aa17.32■□□□□ 0.36
PAX6-266ENST00000640242 C1QBPQ07021 282 aaKnown RBP17.32■□□□□ 0.36
PAX6-266ENST00000640242 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
PAX6-266ENST00000640242 TCOF1Q13428 1488 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms