RNA–Protein interactions for RNA: ENST00000640233.1

ZC3H12A-204, Transcript of zinc finger CCCH-type containing 12A, humanhuman

TSL 5

Gene ZC3H12A, Length 2,721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12A-204ENST00000640233 URB2Q14146 1524 aaKnown RBP23.38■■□□□ 1.33
ZC3H12A-204ENST00000640233 FHAD1B1AJZ9 1412 aa23.38■■□□□ 1.33
ZC3H12A-204ENST00000640233 ITGAEP38570 1179 aa23.35■■□□□ 1.33
ZC3H12A-204ENST00000640233 ACIN1Q9UKV3 1341 aaKnown RBP23.35■■□□□ 1.33
ZC3H12A-204ENST00000640233 LRRC9Q6ZRR7 1453 aa23.35■■□□□ 1.33
ZC3H12A-204ENST00000640233 CUL7Q14999 1698 aa23.35■■□□□ 1.33
ZC3H12A-204ENST00000640233 FHOD3Q2V2M9 1422 aa23.31■■□□□ 1.32
ZC3H12A-204ENST00000640233 PCF11O94913 1555 aaKnown RBP23.31■■□□□ 1.32
ZC3H12A-204ENST00000640233 WDR97A6NE52 1622 aa23.3■■□□□ 1.32
ZC3H12A-204ENST00000640233 ATP1B4Q9UN42 357 aaPredicted RBP23.29■■□□□ 1.32
ZC3H12A-204ENST00000640233 GTF3C3Q9Y5Q9 886 aa23.28■■□□□ 1.32
ZC3H12A-204ENST00000640233 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
ZC3H12A-204ENST00000640233 PHLDB1Q86UU1 1377 aa23.27■■□□□ 1.32
ZC3H12A-204ENST00000640233 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.32
ZC3H12A-204ENST00000640233 EFCAB5A4FU69 1503 aa23.27■■□□□ 1.32
ZC3H12A-204ENST00000640233 CTTNBP2Q8WZ74 1663 aa23.27■■□□□ 1.32
ZC3H12A-204ENST00000640233 CFAP43Q8NDM7 1665 aa23.26■■□□□ 1.31
ZC3H12A-204ENST00000640233 CENPBP07199 599 aaPredicted RBP23.25■■□□□ 1.31
ZC3H12A-204ENST00000640233 ERCC6Q03468 1493 aa23.24■■□□□ 1.31
ZC3H12A-204ENST00000640233 ABCA5Q8WWZ7 1642 aa23.22■■□□□ 1.31
ZC3H12A-204ENST00000640233 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
ZC3H12A-204ENST00000640233 FYCO1Q9BQS8 1478 aa23.21■■□□□ 1.31
ZC3H12A-204ENST00000640233 RAB3GAP2Q9H2M9 1393 aa23.2■■□□□ 1.3
ZC3H12A-204ENST00000640233 MIER1Q8N108 512 aa23.2■■□□□ 1.3
ZC3H12A-204ENST00000640233 CASKIN1Q8WXD9 1431 aa23.2■■□□□ 1.3
ZC3H12A-204ENST00000640233 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
ZC3H12A-204ENST00000640233 AQRO60306 1485 aaKnown RBP eCLIP23.18■■□□□ 1.31e-6■■■■■ 38
ZC3H12A-204ENST00000640233 FAM50AQ14320 339 aaKnown RBP23.17■■□□□ 1.3
ZC3H12A-204ENST00000640233 FMN1Q68DA7 1419 aa23.14■■□□□ 1.29
ZC3H12A-204ENST00000640233 SETD5Q9C0A6 1442 aa23.13■■□□□ 1.29
ZC3H12A-204ENST00000640233 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
ZC3H12A-204ENST00000640233 TARBP1Q13395 1621 aaKnown RBP23.08■■□□□ 1.28
ZC3H12A-204ENST00000640233 SAMD9Q5K651 1589 aa23.07■■□□□ 1.28
ZC3H12A-204ENST00000640233 MAPKBP1O60336 1514 aa23.07■■□□□ 1.28
ZC3H12A-204ENST00000640233 YTHDC1Q96MU7 727 aaKnown RBP23.07■■□□□ 1.28
ZC3H12A-204ENST00000640233 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.01■■□□□ 1.271e-6■□□□□ 11
ZC3H12A-204ENST00000640233 MTUS2Q5JR59 1369 aa23■■□□□ 1.27
ZC3H12A-204ENST00000640233 LRRIQ1Q96JM4 1722 aa22.98■■□□□ 1.27
ZC3H12A-204ENST00000640233 FGD6Q6ZV73 1430 aa22.97■■□□□ 1.27
ZC3H12A-204ENST00000640233 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
ZC3H12A-204ENST00000640233 PBRM1Q86U86 1689 aa22.94■■□□□ 1.26
ZC3H12A-204ENST00000640233 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
ZC3H12A-204ENST00000640233 SIN3AQ96ST3 1273 aa22.92■■□□□ 1.26
ZC3H12A-204ENST00000640233 THOC2Q8NI27 1593 aaKnown RBP22.9■■□□□ 1.26
ZC3H12A-204ENST00000640233 NCOA2Q15596 1464 aa22.88■■□□□ 1.25
ZC3H12A-204ENST00000640233 ADAMTS12P58397 1594 aa22.86■■□□□ 1.25
ZC3H12A-204ENST00000640233 MYOM3Q5VTT5 1437 aa22.85■■□□□ 1.25
ZC3H12A-204ENST00000640233 SUPT6HQ7KZ85 1726 aaKnown RBP22.84■■□□□ 1.25
ZC3H12A-204ENST00000640233 PTPRKQ15262 1439 aa22.84■■□□□ 1.25
ZC3H12A-204ENST00000640233 IQGAP2Q13576 1575 aa22.84■■□□□ 1.25
ZC3H12A-204ENST00000640233 EHBP1L1Q8N3D4 1523 aa22.84■■□□□ 1.25
ZC3H12A-204ENST00000640233 MYT1Q01538 1121 aa22.81■■□□□ 1.24
ZC3H12A-204ENST00000640233 MAGI3Q5TCQ9 1506 aa22.8■■□□□ 1.24
ZC3H12A-204ENST00000640233 CCDC18Q5T9S5 1454 aa22.79■■□□□ 1.24
ZC3H12A-204ENST00000640233 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
ZC3H12A-204ENST00000640233 TIMELESSQ9UNS1 1208 aa22.79■■□□□ 1.24
ZC3H12A-204ENST00000640233 HFM1A2PYH4 1435 aa22.78■■□□□ 1.24
ZC3H12A-204ENST00000640233 UGGT2Q9NYU1 1516 aa22.78■■□□□ 1.24
ZC3H12A-204ENST00000640233 FBLN2P98095 1184 aa22.78■■□□□ 1.24
ZC3H12A-204ENST00000640233 IFT140Q96RY7 1462 aa22.77■■□□□ 1.24
ZC3H12A-204ENST00000640233 HECW1Q76N89 1606 aa22.76■■□□□ 1.23
ZC3H12A-204ENST00000640233 ARHGEF11O15085 1522 aa22.76■■□□□ 1.23
ZC3H12A-204ENST00000640233 PTPN23Q9H3S7 1636 aa22.75■■□□□ 1.23
ZC3H12A-204ENST00000640233 WDR62O43379 1518 aa22.73■■□□□ 1.23
ZC3H12A-204ENST00000640233 EPRSP07814 1512 aaKnown RBP22.73■■□□□ 1.23
ZC3H12A-204ENST00000640233 NAIPQ13075 1403 aa22.73■■□□□ 1.23
ZC3H12A-204ENST00000640233 UACAQ9BZF9 1416 aa22.72■■□□□ 1.23
ZC3H12A-204ENST00000640233 PPP1R15AO75807 674 aaPredicted RBP22.71■■□□□ 1.23
ZC3H12A-204ENST00000640233 CDK13Q14004 1512 aaKnown RBP22.69■■□□□ 1.22
ZC3H12A-204ENST00000640233 ARID3CA6NKF2 412 aa22.68■■□□□ 1.22
ZC3H12A-204ENST00000640233 TCOF1Q13428 1488 aaKnown RBP22.65■■□□□ 1.22
ZC3H12A-204ENST00000640233 KIAA0586Q9BVV6 1533 aa22.65■■□□□ 1.22
ZC3H12A-204ENST00000640233 CHIC2Q9UKJ5 165 aa22.63■■□□□ 1.21
ZC3H12A-204ENST00000640233 RRP7BPQ9NSQ0 103 aa22.63■■□□□ 1.21
ZC3H12A-204ENST00000640233 TONSLQ96HA7 1378 aa22.62■■□□□ 1.21
ZC3H12A-204ENST00000640233 EIF4G3O43432 1585 aaKnown RBP22.61■■□□□ 1.21
ZC3H12A-204ENST00000640233 DISP1Q96F81 1524 aa22.61■■□□□ 1.21
ZC3H12A-204ENST00000640233 GRIN2AQ12879 1464 aa22.6■■□□□ 1.21
ZC3H12A-204ENST00000640233 DDX10Q13206 875 aaKnown RBP22.6■■□□□ 1.21
ZC3H12A-204ENST00000640233 KIAA0556O60303 1618 aa22.6■■□□□ 1.21
ZC3H12A-204ENST00000640233 MIA2Q96PC5 1412 aa22.59■■□□□ 1.21
ZC3H12A-204ENST00000640233 HIRIP3Q9BW71 556 aaPredicted RBP22.58■■□□□ 1.21
ZC3H12A-204ENST00000640233 GCC2Q8IWJ2 1684 aa22.54■■□□□ 1.2
ZC3H12A-204ENST00000640233 KCNH8Q96L42 1107 aa22.52■■□□□ 1.2
ZC3H12A-204ENST00000640233 AKNAQ7Z591 1439 aa22.52■■□□□ 1.2
ZC3H12A-204ENST00000640233 NUP153P49790 1475 aaKnown RBP22.52■■□□□ 1.2
ZC3H12A-204ENST00000640233 CHMP7Q8WUX9 453 aaPredicted RBP22.51■■□□□ 1.19
ZC3H12A-204ENST00000640233 TRIM52Q96A61 297 aa22.5■■□□□ 1.19
ZC3H12A-204ENST00000640233 RAPGEF6Q8TEU7 1601 aa22.5■■□□□ 1.19
ZC3H12A-204ENST00000640233 KDM6BO15054 1643 aa22.49■■□□□ 1.19
ZC3H12A-204ENST00000640233 MAGI1Q96QZ7 1491 aaPredicted RBP22.49■■□□□ 1.19
ZC3H12A-204ENST00000640233 DENND4BO75064 1496 aaPredicted RBP22.47■■□□□ 1.19
ZC3H12A-204ENST00000640233 CDK11AQ9UQ88 783 aaPredicted RBP22.45■■□□□ 1.19
ZC3H12A-204ENST00000640233 SYNJ2O15056 1496 aa22.45■■□□□ 1.18
ZC3H12A-204ENST00000640233 CEP170Q5SW79 1584 aa22.44■■□□□ 1.18
ZC3H12A-204ENST00000640233 KDM5BQ9UGL1 1544 aa22.44■■□□□ 1.18
ZC3H12A-204ENST00000640233 DAPK1P53355 1430 aa22.43■■□□□ 1.18
ZC3H12A-204ENST00000640233 ZNF644Q9H582 1327 aaPredicted RBP22.43■■□□□ 1.18
ZC3H12A-204ENST00000640233 MPHOSPH9Q99550 1183 aa22.42■■□□□ 1.18
ZC3H12A-204ENST00000640233 ABCC5O15440 1437 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms