RNA–Protein interactions for RNA: ENST00000640055.1

PRICKLE1-215, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-215ENST00000640055 KCNH8Q96L42 1107 aa17.64■□□□□ 0.41
PRICKLE1-215ENST00000640055 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
PRICKLE1-215ENST00000640055 BCANQ96GW7 911 aa17.63■□□□□ 0.41
PRICKLE1-215ENST00000640055 SCAF1Q9H7N4 1312 aaKnown RBP17.63■□□□□ 0.41
PRICKLE1-215ENST00000640055 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
PRICKLE1-215ENST00000640055 CUX1P39880 1505 aa17.62■□□□□ 0.41
PRICKLE1-215ENST00000640055 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.4
PRICKLE1-215ENST00000640055 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
PRICKLE1-215ENST00000640055 ARAP1Q96P48 1450 aa17.56■□□□□ 0.4
PRICKLE1-215ENST00000640055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.4
PRICKLE1-215ENST00000640055 CFTRP13569 1480 aa17.54■□□□□ 0.4
PRICKLE1-215ENST00000640055 CCNB3Q8WWL7 1395 aa17.52■□□□□ 0.4
PRICKLE1-215ENST00000640055 PDS5BQ9NTI5 1447 aa17.5■□□□□ 0.39
PRICKLE1-215ENST00000640055 KDM2AQ9Y2K7 1162 aa17.49■□□□□ 0.39
PRICKLE1-215ENST00000640055 ACIN1Q9UKV3 1341 aaKnown RBP17.49■□□□□ 0.39
PRICKLE1-215ENST00000640055 KIF21BO75037 1637 aa17.48■□□□□ 0.39
PRICKLE1-215ENST00000640055 ZNF644Q9H582 1327 aaPredicted RBP17.44■□□□□ 0.38
PRICKLE1-215ENST00000640055 RAB3GAP2Q9H2M9 1393 aa17.43■□□□□ 0.38
PRICKLE1-215ENST00000640055 ARHGAP35Q9NRY4 1499 aa17.39■□□□□ 0.38
PRICKLE1-215ENST00000640055 PHLDB1Q86UU1 1377 aa17.39■□□□□ 0.38
PRICKLE1-215ENST00000640055 RGL3Q3MIN7 710 aa17.38■□□□□ 0.37
PRICKLE1-215ENST00000640055 PRXQ9BXM0 1461 aa17.37■□□□□ 0.37
PRICKLE1-215ENST00000640055 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
PRICKLE1-215ENST00000640055 TONSLQ96HA7 1378 aa17.36■□□□□ 0.37
PRICKLE1-215ENST00000640055 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
PRICKLE1-215ENST00000640055 SLC4A1APQ9BWU0 796 aaKnown RBP17.36■□□□□ 0.37
PRICKLE1-215ENST00000640055 CFDP1Q9UEE9 299 aaPredicted RBP17.36■□□□□ 0.37
PRICKLE1-215ENST00000640055 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
PRICKLE1-215ENST00000640055 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.36
PRICKLE1-215ENST00000640055 CDK11AQ9UQ88 783 aaPredicted RBP17.32■□□□□ 0.36
PRICKLE1-215ENST00000640055 DHX57Q6P158 1386 aaKnown RBP17.31■□□□□ 0.36
PRICKLE1-215ENST00000640055 IRX6P78412 446 aaPredicted RBP17.3■□□□□ 0.36
PRICKLE1-215ENST00000640055 TOPBP1Q92547 1522 aa17.3■□□□□ 0.36
PRICKLE1-215ENST00000640055 PEG3Q9GZU2 1588 aa17.3■□□□□ 0.36
PRICKLE1-215ENST00000640055 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
PRICKLE1-215ENST00000640055 JPH4Q96JJ6 628 aa17.29■□□□□ 0.36
PRICKLE1-215ENST00000640055 PLEKHD1A6NEE1 506 aa17.27■□□□□ 0.36
PRICKLE1-215ENST00000640055 HMGXB3Q12766 1538 aa17.27■□□□□ 0.36
PRICKLE1-215ENST00000640055 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
PRICKLE1-215ENST00000640055 HNRNPMP52272 730 aaKnown RBP eCLIP17.24■□□□□ 0.35
PRICKLE1-215ENST00000640055 ANP32CO43423 234 aa17.24■□□□□ 0.35
PRICKLE1-215ENST00000640055 FHAD1B1AJZ9 1412 aa17.22■□□□□ 0.35
PRICKLE1-215ENST00000640055 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
PRICKLE1-215ENST00000640055 ZNF608Q9ULD9 1512 aaPredicted RBP17.21■□□□□ 0.34
PRICKLE1-215ENST00000640055 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
PRICKLE1-215ENST00000640055 TSPY4P0CV99 314 aa17.2■□□□□ 0.34
PRICKLE1-215ENST00000640055 TSPY10P0CW01 314 aa17.2■□□□□ 0.34
PRICKLE1-215ENST00000640055 SETD5Q9C0A6 1442 aa17.19■□□□□ 0.34
PRICKLE1-215ENST00000640055 HNRNPUQ00839 825 aaKnown RBP eCLIP17.14■□□□□ 0.33
PRICKLE1-215ENST00000640055 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
PRICKLE1-215ENST00000640055 NEFLP07196 543 aa17.11■□□□□ 0.33
PRICKLE1-215ENST00000640055 L3MBTL2Q969R5 705 aa17.11■□□□□ 0.33
PRICKLE1-215ENST00000640055 FKBP8Q14318 412 aa17.1■□□□□ 0.33
PRICKLE1-215ENST00000640055 LRRC9Q6ZRR7 1453 aa17.09■□□□□ 0.33
PRICKLE1-215ENST00000640055 PKD2Q13563 968 aa17.09■□□□□ 0.33
PRICKLE1-215ENST00000640055 FMN1Q68DA7 1419 aa17.08■□□□□ 0.33
PRICKLE1-215ENST00000640055 PPP1R15AO75807 674 aaPredicted RBP17.07■□□□□ 0.32
PRICKLE1-215ENST00000640055 HSPA5P11021 654 aaKnown RBP17.04■□□□□ 0.32
PRICKLE1-215ENST00000640055 DCAF11Q8TEB1 546 aa17.04■□□□□ 0.32
PRICKLE1-215ENST00000640055 CDK13Q14004 1512 aaKnown RBP17.02■□□□□ 0.32
PRICKLE1-215ENST00000640055 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
PRICKLE1-215ENST00000640055 EIF4G2P78344 907 aaKnown RBP eCLIP17.01■□□□□ 0.31
PRICKLE1-215ENST00000640055 NUTM2DQ5VT03 806 aaPredicted RBP17■□□□□ 0.31
PRICKLE1-215ENST00000640055 PRG4Q92954 1404 aaPredicted RBP16.99■□□□□ 0.31
PRICKLE1-215ENST00000640055 MRS2Q9HD23 443 aa16.99■□□□□ 0.31
PRICKLE1-215ENST00000640055 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
PRICKLE1-215ENST00000640055 FGD6Q6ZV73 1430 aa16.97■□□□□ 0.31
PRICKLE1-215ENST00000640055 SNAPC4Q5SXM2 1469 aa16.97■□□□□ 0.31
PRICKLE1-215ENST00000640055 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
PRICKLE1-215ENST00000640055 ABCA10Q8WWZ4 1543 aa16.96■□□□□ 0.31
PRICKLE1-215ENST00000640055 NCOA2Q15596 1464 aa16.95■□□□□ 0.3
PRICKLE1-215ENST00000640055 NPM1P06748 294 aaKnown RBP eCLIP16.94■□□□□ 0.3
PRICKLE1-215ENST00000640055 PCF11O94913 1555 aaKnown RBP16.94■□□□□ 0.3
PRICKLE1-215ENST00000640055 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
PRICKLE1-215ENST00000640055 NUP155O75694 1391 aa16.93■□□□□ 0.3
PRICKLE1-215ENST00000640055 PTPRKQ15262 1439 aa16.93■□□□□ 0.3
PRICKLE1-215ENST00000640055 PRDM2Q13029 1718 aa16.92■□□□□ 0.3
PRICKLE1-215ENST00000640055 PLB1Q6P1J6 1458 aa16.92■□□□□ 0.3
PRICKLE1-215ENST00000640055 RRBP1Q9P2E9 1410 aaKnown RBP16.92■□□□□ 0.3
PRICKLE1-215ENST00000640055 MLECQ14165 292 aa16.91■□□□□ 0.3
PRICKLE1-215ENST00000640055 GGT6Q6P531 493 aa16.91■□□□□ 0.3
PRICKLE1-215ENST00000640055 AFAP1Q8N556 730 aa16.9■□□□□ 0.3
PRICKLE1-215ENST00000640055 CASKIN1Q8WXD9 1431 aa16.9■□□□□ 0.3
PRICKLE1-215ENST00000640055 CYB5RLQ6IPT4 315 aa16.89■□□□□ 0.3
PRICKLE1-215ENST00000640055 BCL11AQ9H165 835 aa16.89■□□□□ 0.3
PRICKLE1-215ENST00000640055 SAFB2Q14151 953 aaKnown RBP eCLIP16.89■□□□□ 0.29
PRICKLE1-215ENST00000640055 CCDC18Q5T9S5 1454 aa16.89■□□□□ 0.29
PRICKLE1-215ENST00000640055 PLEKHG5O94827 1062 aa16.89■□□□□ 0.29
PRICKLE1-215ENST00000640055 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
PRICKLE1-215ENST00000640055 SUPT16HQ9Y5B9 1047 aaKnown RBP16.88■□□□□ 0.29
PRICKLE1-215ENST00000640055 TIAM1Q13009 1591 aa16.88■□□□□ 0.29
PRICKLE1-215ENST00000640055 GRIN2BQ13224 1484 aa16.88■□□□□ 0.29
PRICKLE1-215ENST00000640055 PTPRGP23470 1445 aa16.87■□□□□ 0.29
PRICKLE1-215ENST00000640055 NBPF8Q3BBV2 869 aa16.86■□□□□ 0.29
PRICKLE1-215ENST00000640055 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
PRICKLE1-215ENST00000640055 TNNT2P45379 298 aaPredicted RBP16.85■□□□□ 0.29
PRICKLE1-215ENST00000640055 CC2D1BQ5T0F9 858 aaKnown RBP16.85■□□□□ 0.29
PRICKLE1-215ENST00000640055 PELP1Q8IZL8 1130 aaKnown RBP16.85■□□□□ 0.29
PRICKLE1-215ENST00000640055 MYOM3Q5VTT5 1437 aa16.85■□□□□ 0.29
PRICKLE1-215ENST00000640055 CLSPNQ9HAW4 1339 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms