RNA–Protein interactions for RNA: ENST00000639716.1

KCNMA1-269, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 3,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-269ENST00000639716 CNGB1Q14028 1251 aaPredicted RBP9.92□□□□□ -0.82
KCNMA1-269ENST00000639716 ABCC8Q09428 1581 aa9.91□□□□□ -0.82
KCNMA1-269ENST00000639716 ERICH3Q5RHP9 1530 aa9.9□□□□□ -0.83
KCNMA1-269ENST00000639716 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.83
KCNMA1-269ENST00000639716 NEUROD1Q13562 356 aa9.88□□□□□ -0.83
KCNMA1-269ENST00000639716 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.88□□□□□ -0.83
KCNMA1-269ENST00000639716 TNIKQ9UKE5 1360 aa9.87□□□□□ -0.83
KCNMA1-269ENST00000639716 CUX2O14529 1486 aa9.87□□□□□ -0.83
KCNMA1-269ENST00000639716 MYT1LQ9UL68 1186 aa9.85□□□□□ -0.83
KCNMA1-269ENST00000639716 BCL11BQ9C0K0 894 aaPredicted RBP9.84□□□□□ -0.83
KCNMA1-269ENST00000639716 CDK11BP21127 795 aaKnown RBP9.83□□□□□ -0.84
KCNMA1-269ENST00000639716 CDK11AQ9UQ88 783 aaPredicted RBP9.83□□□□□ -0.84
KCNMA1-269ENST00000639716 TAF7LQ5H9L4 462 aa9.83□□□□□ -0.84
KCNMA1-269ENST00000639716 DHX37Q8IY37 1157 aaKnown RBP9.83□□□□□ -0.84
KCNMA1-269ENST00000639716 SALL2Q9Y467 1007 aaPredicted RBP9.82□□□□□ -0.84
KCNMA1-269ENST00000639716 TAOK2Q9UL54 1235 aa9.81□□□□□ -0.84
KCNMA1-269ENST00000639716 ATAD2BQ9ULI0 1458 aa9.81□□□□□ -0.84
KCNMA1-269ENST00000639716 DEKP35659 375 aaKnown RBP9.79□□□□□ -0.84
KCNMA1-269ENST00000639716 FAM50AQ14320 339 aaKnown RBP9.78□□□□□ -0.84
KCNMA1-269ENST00000639716 ZNF326Q5BKZ1 582 aaKnown RBP9.78□□□□□ -0.84
KCNMA1-269ENST00000639716 MAP3K1Q13233 1512 aa9.77□□□□□ -0.84
KCNMA1-269ENST00000639716 NAP1L5Q96NT1 182 aaPredicted RBP9.77□□□□□ -0.85
KCNMA1-269ENST00000639716 PRXQ9BXM0 1461 aa9.77□□□□□ -0.85
KCNMA1-269ENST00000639716 WDR97A6NE52 1622 aa9.77□□□□□ -0.85
KCNMA1-269ENST00000639716 CEP162Q5TB80 1403 aa9.76□□□□□ -0.85
KCNMA1-269ENST00000639716 CHMP4AQ9BY43 222 aa9.76□□□□□ -0.85
KCNMA1-269ENST00000639716 GOLGA3Q08378 1498 aa9.76□□□□□ -0.85
KCNMA1-269ENST00000639716 RUSC2Q8N2Y8 1516 aa9.75□□□□□ -0.85
KCNMA1-269ENST00000639716 SENP3Q9H4L4 574 aaPredicted RBP9.75□□□□□ -0.85
KCNMA1-269ENST00000639716 SOGA1O94964 1423 aa9.74□□□□□ -0.85
KCNMA1-269ENST00000639716 VSIG10Q8N0Z9 540 aa9.74□□□□□ -0.85
KCNMA1-269ENST00000639716 ERICH6BQ5W0A0 696 aa9.73□□□□□ -0.85
KCNMA1-269ENST00000639716 CFAP43Q8NDM7 1665 aa9.73□□□□□ -0.85
KCNMA1-269ENST00000639716 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
KCNMA1-269ENST00000639716 NCAPD3P42695 1498 aa9.72□□□□□ -0.85
KCNMA1-269ENST00000639716 BRD2P25440 801 aaKnown RBP9.71□□□□□ -0.85
KCNMA1-269ENST00000639716 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
KCNMA1-269ENST00000639716 BCANQ96GW7 911 aa9.7□□□□□ -0.86
KCNMA1-269ENST00000639716 ZNF777Q9ULD5 760 aaPredicted RBP9.69□□□□□ -0.86
KCNMA1-269ENST00000639716 RTL5Q5HYW3 569 aaPredicted RBP9.69□□□□□ -0.86
KCNMA1-269ENST00000639716 ARAP1Q96P48 1450 aa9.67□□□□□ -0.86
KCNMA1-269ENST00000639716 CUX1P39880 1505 aa9.67□□□□□ -0.86
KCNMA1-269ENST00000639716 KCNA4P22459 653 aa9.67□□□□□ -0.86
KCNMA1-269ENST00000639716 FGD1P98174 961 aa9.66□□□□□ -0.86
KCNMA1-269ENST00000639716 DIEXFQ68CQ4 756 aaKnown RBP9.66□□□□□ -0.86
KCNMA1-269ENST00000639716 CFTRP13569 1480 aa9.65□□□□□ -0.86
KCNMA1-269ENST00000639716 VPS8Q8N3P4 1428 aa9.65□□□□□ -0.87
KCNMA1-269ENST00000639716 RRBP1Q9P2E9 1410 aaKnown RBP9.64□□□□□ -0.87
KCNMA1-269ENST00000639716 CHIC2Q9UKJ5 165 aa9.62□□□□□ -0.87
KCNMA1-269ENST00000639716 LRRIQ1Q96JM4 1722 aa9.62□□□□□ -0.87
KCNMA1-269ENST00000639716 KIF21AQ7Z4S6 1674 aa9.61□□□□□ -0.87
KCNMA1-269ENST00000639716 CLIP1P30622 1438 aa9.61□□□□□ -0.87
KCNMA1-269ENST00000639716 IRX6P78412 446 aaPredicted RBP9.6□□□□□ -0.87
KCNMA1-269ENST00000639716 TRIM52Q96A61 297 aa9.59□□□□□ -0.87
KCNMA1-269ENST00000639716 CHMP7Q8WUX9 453 aaPredicted RBP9.58□□□□□ -0.88
KCNMA1-269ENST00000639716 RAPGEF2Q9Y4G8 1499 aa9.58□□□□□ -0.88
KCNMA1-269ENST00000639716 RBM10P98175 930 aaKnown RBP9.58□□□□□ -0.88
KCNMA1-269ENST00000639716 TDRD9Q8NDG6 1382 aaKnown RBP9.58□□□□□ -0.88
KCNMA1-269ENST00000639716 CTTNBP2Q8WZ74 1663 aa9.57□□□□□ -0.88
KCNMA1-269ENST00000639716 KCNH8Q96L42 1107 aa9.57□□□□□ -0.88
KCNMA1-269ENST00000639716 CC2D2AQ9P2K1 1620 aa9.56□□□□□ -0.88
KCNMA1-269ENST00000639716 ZMYND15Q9H091 742 aa9.55□□□□□ -0.88
KCNMA1-269ENST00000639716 CFAP44Q96MT7 982 aa9.54□□□□□ -0.88
KCNMA1-269ENST00000639716 SAMD9Q5K651 1589 aa9.54□□□□□ -0.88
KCNMA1-269ENST00000639716 HIRIP3Q9BW71 556 aaPredicted RBP9.54□□□□□ -0.88
KCNMA1-269ENST00000639716 TIAM1Q13009 1591 aa9.52□□□□□ -0.89
KCNMA1-269ENST00000639716 CUL7Q14999 1698 aa9.52□□□□□ -0.89
KCNMA1-269ENST00000639716 MAPKBP1O60336 1514 aa9.52□□□□□ -0.89
KCNMA1-269ENST00000639716 HSP90B1P14625 803 aaKnown RBP9.51□□□□□ -0.89
KCNMA1-269ENST00000639716 FBXO3Q9UK99 471 aa9.51□□□□□ -0.89
KCNMA1-269ENST00000639716 ARHGEF11O15085 1522 aa9.51□□□□□ -0.89
KCNMA1-269ENST00000639716 ERCC6Q03468 1493 aa9.51□□□□□ -0.89
KCNMA1-269ENST00000639716 ABCA5Q8WWZ7 1642 aa9.51□□□□□ -0.89
KCNMA1-269ENST00000639716 AQRO60306 1485 aaKnown RBP eCLIP9.51□□□□□ -0.89
KCNMA1-269ENST00000639716 THOC2Q8NI27 1593 aaKnown RBP9.49□□□□□ -0.89
KCNMA1-269ENST00000639716 ARHGAP35Q9NRY4 1499 aa9.49□□□□□ -0.89
KCNMA1-269ENST00000639716 AAMPQ13685 434 aa9.48□□□□□ -0.89
KCNMA1-269ENST00000639716 KDM5BQ9UGL1 1544 aa9.48□□□□□ -0.89
KCNMA1-269ENST00000639716 SENP3-EIF4A1A0A087X0R7 540 aa9.48□□□□□ -0.89
KCNMA1-269ENST00000639716 CCDC9Q9Y3X0 531 aaKnown RBP9.48□□□□□ -0.89
KCNMA1-269ENST00000639716 POLR1AO95602 1720 aaPredicted RBP9.48□□□□□ -0.89
KCNMA1-269ENST00000639716 NESP48681 1621 aa9.47□□□□□ -0.89
KCNMA1-269ENST00000639716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.47□□□□□ -0.89
KCNMA1-269ENST00000639716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.46□□□□□ -0.9
KCNMA1-269ENST00000639716 EFCAB5A4FU69 1503 aa9.45□□□□□ -0.9
KCNMA1-269ENST00000639716 RRP7BPQ9NSQ0 103 aa9.45□□□□□ -0.9
KCNMA1-269ENST00000639716 SAMD1Q6SPF0 538 aaPredicted RBP9.44□□□□□ -0.9
KCNMA1-269ENST00000639716 SLC4A1APQ9BWU0 796 aaKnown RBP9.43□□□□□ -0.9
KCNMA1-269ENST00000639716 DNMBPQ6XZF7 1577 aa9.43□□□□□ -0.9
KCNMA1-269ENST00000639716 GCC2Q8IWJ2 1684 aa9.43□□□□□ -0.9
KCNMA1-269ENST00000639716 KANK4Q5T7N3 995 aaPredicted RBP9.43□□□□□ -0.9
KCNMA1-269ENST00000639716 ZNF526Q8TF50 670 aaPredicted RBP9.42□□□□□ -0.9
KCNMA1-269ENST00000639716 ABCA10Q8WWZ4 1543 aa9.42□□□□□ -0.9
KCNMA1-269ENST00000639716 HMGB1P09429 215 aaKnown RBP9.41□□□□□ -0.9
KCNMA1-269ENST00000639716 SNAPC4Q5SXM2 1469 aa9.41□□□□□ -0.9
KCNMA1-269ENST00000639716 DHX57Q6P158 1386 aaKnown RBP9.4□□□□□ -0.9
KCNMA1-269ENST00000639716 NAP1L2Q9ULW6 460 aaPredicted RBP9.4□□□□□ -0.9
KCNMA1-269ENST00000639716 PCF11O94913 1555 aaKnown RBP9.39□□□□□ -0.91
KCNMA1-269ENST00000639716 NCLP19338 710 aaKnown RBP9.39□□□□□ -0.91
KCNMA1-269ENST00000639716 NBR1Q14596 966 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms