RNA–Protein interactions for RNA: ENST00000639716.1

KCNMA1-269, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 3,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-269ENST00000639716 NISCHQ9Y2I1 1504 aa13.46□□□□□ -0.26
KCNMA1-269ENST00000639716 DCAF8L2P0C7V8 631 aa12.45□□□□□ -0.42
KCNMA1-269ENST00000639716 MYT1Q01538 1121 aa12.38□□□□□ -0.43
KCNMA1-269ENST00000639716 PELP1Q8IZL8 1130 aaKnown RBP12.32□□□□□ -0.44
KCNMA1-269ENST00000639716 SLC24A1O60721 1099 aa12□□□□□ -0.49
KCNMA1-269ENST00000639716 SHROOM4Q9ULL8 1493 aa11.85□□□□□ -0.51
KCNMA1-269ENST00000639716 CCDC180Q9P1Z9 1646 aa11.85□□□□□ -0.51
KCNMA1-269ENST00000639716 TTBK1Q5TCY1 1321 aaPredicted RBP11.81□□□□□ -0.52
KCNMA1-269ENST00000639716 ERICH6Q7L0X2 663 aa11.72□□□□□ -0.53
KCNMA1-269ENST00000639716 SUPT5HO00267 1087 aaKnown RBP11.64□□□□□ -0.55
KCNMA1-269ENST00000639716 ZCCHC6Q5VYS8 1495 aaKnown RBP11.56□□□□□ -0.56
KCNMA1-269ENST00000639716 DCAF1Q9Y4B6 1507 aa11.5□□□□□ -0.57
KCNMA1-269ENST00000639716 EHMT2Q96KQ7 1210 aa11.44□□□□□ -0.58
KCNMA1-269ENST00000639716 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
KCNMA1-269ENST00000639716 MYO15BQ96JP2 1530 aa11.2□□□□□ -0.62
KCNMA1-269ENST00000639716 DAXXQ9UER7 740 aaPredicted RBP11.14□□□□□ -0.63
KCNMA1-269ENST00000639716 CHIC1Q5VXU3 224 aa11.1□□□□□ -0.63
KCNMA1-269ENST00000639716 EIF5BO60841 1220 aaKnown RBP11.03□□□□□ -0.64
KCNMA1-269ENST00000639716 FAM9AQ8IZU1 332 aaPredicted RBP11.02□□□□□ -0.65
KCNMA1-269ENST00000639716 ABCC9O60706 1549 aa11□□□□□ -0.65
KCNMA1-269ENST00000639716 APLP2Q06481 763 aa11□□□□□ -0.65
KCNMA1-269ENST00000639716 BCL11AQ9H165 835 aa10.99□□□□□ -0.65
KCNMA1-269ENST00000639716 PABPN1Q86U42 306 aaKnown RBP eCLIP10.92□□□□□ -0.66
KCNMA1-269ENST00000639716 RANGAP1P46060 587 aaPredicted RBP10.89□□□□□ -0.67
KCNMA1-269ENST00000639716 EIF4G1Q04637 1599 aaKnown RBP10.84□□□□□ -0.67
KCNMA1-269ENST00000639716 CENPBP07199 599 aaPredicted RBP10.77□□□□□ -0.69
KCNMA1-269ENST00000639716 PPARGC1BQ86YN6 1023 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-269ENST00000639716 RB1CC1Q8TDY2 1594 aa10.64□□□□□ -0.71
KCNMA1-269ENST00000639716 AEBP2Q6ZN18 517 aaPredicted RBP10.62□□□□□ -0.71
KCNMA1-269ENST00000639716 NACADO15069 1562 aa10.61□□□□□ -0.71
KCNMA1-269ENST00000639716 LOC105371045A0A1W2PR82 267 aa10.57□□□□□ -0.72
KCNMA1-269ENST00000639716 UNC13AQ9UPW8 1703 aa10.55□□□□□ -0.72
KCNMA1-269ENST00000639716 PCGF6Q9BYE7 350 aa10.55□□□□□ -0.72
KCNMA1-269ENST00000639716 PODXL2Q9NZ53 605 aa10.54□□□□□ -0.72
KCNMA1-269ENST00000639716 TRIM41Q8WV44 630 aa10.54□□□□□ -0.72
KCNMA1-269ENST00000639716 BAZ1AQ9NRL2 1556 aaPredicted RBP10.53□□□□□ -0.72
KCNMA1-269ENST00000639716 RSF1Q96T23 1441 aaPredicted RBP10.52□□□□□ -0.73
KCNMA1-269ENST00000639716 PLEKHG5O94827 1062 aa10.51□□□□□ -0.73
KCNMA1-269ENST00000639716 HRCP23327 699 aa10.48□□□□□ -0.73
KCNMA1-269ENST00000639716 PLPPR3Q6T4P5 718 aa10.47□□□□□ -0.73
KCNMA1-269ENST00000639716 PEG3Q9GZU2 1588 aa10.47□□□□□ -0.73
KCNMA1-269ENST00000639716 NCBP3Q53F19 620 aaKnown RBP10.45□□□□□ -0.74
KCNMA1-269ENST00000639716 RTN4Q9NQC3 1192 aaKnown RBP10.45□□□□□ -0.74
KCNMA1-269ENST00000639716 ATP1B4Q9UN42 357 aaPredicted RBP10.42□□□□□ -0.74
KCNMA1-269ENST00000639716 SCRIBQ14160 1630 aa10.39□□□□□ -0.75
KCNMA1-269ENST00000639716 SCAF1Q9H7N4 1312 aaKnown RBP10.38□□□□□ -0.75
KCNMA1-269ENST00000639716 UBTFP17480 764 aaKnown RBP10.36□□□□□ -0.75
KCNMA1-269ENST00000639716 MROH2BQ7Z745 1585 aa10.34□□□□□ -0.75
KCNMA1-269ENST00000639716 WIZO95785 1651 aa10.33□□□□□ -0.76
KCNMA1-269ENST00000639716 TOP2AP11388 1531 aaKnown RBP10.31□□□□□ -0.76
KCNMA1-269ENST00000639716 SMARCA4P51532 1647 aa10.3□□□□□ -0.76
KCNMA1-269ENST00000639716 NEFLP07196 543 aa10.29□□□□□ -0.76
KCNMA1-269ENST00000639716 TULP1O00294 542 aaPredicted RBP10.28□□□□□ -0.76
KCNMA1-269ENST00000639716 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
KCNMA1-269ENST00000639716 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
KCNMA1-269ENST00000639716 BICRAQ9NZM4 1560 aa10.24□□□□□ -0.77
KCNMA1-269ENST00000639716 ARXQ96QS3 562 aa10.24□□□□□ -0.77
KCNMA1-269ENST00000639716 PKNOX2Q96KN3 472 aa10.23□□□□□ -0.77
KCNMA1-269ENST00000639716 CECR2Q9BXF3 1484 aa10.22□□□□□ -0.77
KCNMA1-269ENST00000639716 WRNQ14191 1432 aaPredicted RBP eCLIP10.21□□□□□ -0.77
KCNMA1-269ENST00000639716 TIMELESSQ9UNS1 1208 aa10.2□□□□□ -0.78
KCNMA1-269ENST00000639716 ANP32EQ9BTT0 268 aa10.2□□□□□ -0.78
KCNMA1-269ENST00000639716 ITGAEP38570 1179 aa10.17□□□□□ -0.78
KCNMA1-269ENST00000639716 ARID3CA6NKF2 412 aa10.16□□□□□ -0.78
KCNMA1-269ENST00000639716 HOMEZQ8IX15 550 aa10.16□□□□□ -0.78
KCNMA1-269ENST00000639716 PDE4CQ08493 712 aa10.14□□□□□ -0.79
KCNMA1-269ENST00000639716 GTF3C3Q9Y5Q9 886 aa10.13□□□□□ -0.79
KCNMA1-269ENST00000639716 ANO8Q9HCE9 1232 aaPredicted RBP10.13□□□□□ -0.79
KCNMA1-269ENST00000639716 PRDM2Q13029 1718 aa10.13□□□□□ -0.79
KCNMA1-269ENST00000639716 GLIPR1L2Q4G1C9 344 aa10.13□□□□□ -0.79
KCNMA1-269ENST00000639716 UBE2Q2Q8WVN8 375 aa10.12□□□□□ -0.79
KCNMA1-269ENST00000639716 PDIA4P13667 645 aaKnown RBP10.12□□□□□ -0.79
KCNMA1-269ENST00000639716 KIF21BO75037 1637 aa10.12□□□□□ -0.79
KCNMA1-269ENST00000639716 FBLN2P98095 1184 aa10.1□□□□□ -0.79
KCNMA1-269ENST00000639716 BIVM-ERCC5R4GMW8 1640 aa10.1□□□□□ -0.79
KCNMA1-269ENST00000639716 P3H3Q8IVL6 736 aa10.09□□□□□ -0.79
KCNMA1-269ENST00000639716 HAP1P54257 671 aaPredicted RBP10.09□□□□□ -0.79
KCNMA1-269ENST00000639716 C14orf37Q86TY3 774 aa10.08□□□□□ -0.8
KCNMA1-269ENST00000639716 A0A0U1RQG5 324 aaPredicted RBP10.05□□□□□ -0.8
KCNMA1-269ENST00000639716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.05□□□□□ -0.8
KCNMA1-269ENST00000639716 HNRNPUL2Q1KMD3 747 aaKnown RBP10.05□□□□□ -0.8
KCNMA1-269ENST00000639716 CCDC136Q96JN2 1154 aa10.03□□□□□ -0.8
KCNMA1-269ENST00000639716 AMER1Q5JTC6 1135 aaPredicted RBP10.02□□□□□ -0.8
KCNMA1-269ENST00000639716 POLR3GLQ9BT43 218 aa10.02□□□□□ -0.8
KCNMA1-269ENST00000639716 CCDC88BA6NC98 1476 aa10.02□□□□□ -0.8
KCNMA1-269ENST00000639716 CSRNP3Q8WYN3 585 aa10.02□□□□□ -0.81
KCNMA1-269ENST00000639716 ZEB1P37275 1124 aaPredicted RBP10.01□□□□□ -0.81
KCNMA1-269ENST00000639716 NPM2Q86SE8 214 aaKnown RBP10□□□□□ -0.81
KCNMA1-269ENST00000639716 ACIN1Q9UKV3 1341 aaKnown RBP10□□□□□ -0.81
KCNMA1-269ENST00000639716 EEA1Q15075 1411 aa9.99□□□□□ -0.81
KCNMA1-269ENST00000639716 CLSPNQ9HAW4 1339 aa9.98□□□□□ -0.81
KCNMA1-269ENST00000639716 TRIM26Q12899 539 aaPredicted RBP9.97□□□□□ -0.81
KCNMA1-269ENST00000639716 PHF23Q9BUL5 403 aaPredicted RBP9.97□□□□□ -0.81
KCNMA1-269ENST00000639716 YTHDC1Q96MU7 727 aaKnown RBP9.96□□□□□ -0.82
KCNMA1-269ENST00000639716 TOP2BQ02880 1626 aa9.96□□□□□ -0.82
KCNMA1-269ENST00000639716 CCER1Q8TC90 406 aaPredicted RBP9.95□□□□□ -0.82
KCNMA1-269ENST00000639716 SYNJ1O43426 1573 aa9.95□□□□□ -0.82
KCNMA1-269ENST00000639716 BAZ1BQ9UIG0 1483 aaKnown RBP9.93□□□□□ -0.82
KCNMA1-269ENST00000639716 HMGXB3Q12766 1538 aa9.92□□□□□ -0.82
KCNMA1-269ENST00000639716 TPRNQ4KMQ1 711 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms