RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 RRP7BPQ9NSQ0 103 aa11.77□□□□□ -0.53
HNRNPU-219ENST00000639628 RTL5Q5HYW3 569 aaPredicted RBP11.76□□□□□ -0.53
HNRNPU-219ENST00000639628 SIN3AQ96ST3 1273 aa11.76□□□□□ -0.53
HNRNPU-219ENST00000639628 FAM9BQ8IZU0 186 aa11.74□□□□□ -0.53
HNRNPU-219ENST00000639628 ARHGAP35Q9NRY4 1499 aa11.72□□□□□ -0.53
HNRNPU-219ENST00000639628 RAB3GAP2Q9H2M9 1393 aa11.72□□□□□ -0.53
HNRNPU-219ENST00000639628 CADPSQ9ULU8 1353 aa11.71□□□□□ -0.53
HNRNPU-219ENST00000639628 MRS2Q9HD23 443 aa11.71□□□□□ -0.53
HNRNPU-219ENST00000639628 KIF21BO75037 1637 aa11.71□□□□□ -0.54
HNRNPU-219ENST00000639628 SLC4A1APQ9BWU0 796 aaKnown RBP11.7□□□□□ -0.54
HNRNPU-219ENST00000639628 DHX57Q6P158 1386 aaKnown RBP11.7□□□□□ -0.54
HNRNPU-219ENST00000639628 TSPY4P0CV99 314 aa11.69□□□□□ -0.54
HNRNPU-219ENST00000639628 TSPY10P0CW01 314 aa11.69□□□□□ -0.54
HNRNPU-219ENST00000639628 CHMP7Q8WUX9 453 aaPredicted RBP11.68□□□□□ -0.54
HNRNPU-219ENST00000639628 FMN1Q68DA7 1419 aa11.68□□□□□ -0.54
HNRNPU-219ENST00000639628 SUPT16HQ9Y5B9 1047 aaKnown RBP11.67□□□□□ -0.54
HNRNPU-219ENST00000639628 CCER2I3L3R5 266 aa11.65□□□□□ -0.54
HNRNPU-219ENST00000639628 TMC1Q8TDI8 760 aa11.65□□□□□ -0.54
HNRNPU-219ENST00000639628 ANP32AP39687 249 aaKnown RBP11.65□□□□□ -0.54
HNRNPU-219ENST00000639628 SYNJ1O43426 1573 aa11.64□□□□□ -0.55
HNRNPU-219ENST00000639628 CFDP1Q9UEE9 299 aaPredicted RBP11.63□□□□□ -0.55
HNRNPU-219ENST00000639628 NCAPD3P42695 1498 aa11.62□□□□□ -0.55
HNRNPU-219ENST00000639628 ERICH3Q5RHP9 1530 aa11.62□□□□□ -0.55
HNRNPU-219ENST00000639628 PLEKHD1A6NEE1 506 aa11.61□□□□□ -0.55
HNRNPU-219ENST00000639628 EIF4G1Q04637 1599 aaKnown RBP11.61□□□□□ -0.55
HNRNPU-219ENST00000639628 FHOD3Q2V2M9 1422 aa11.6□□□□□ -0.55
HNRNPU-219ENST00000639628 PDS5BQ9NTI5 1447 aa11.6□□□□□ -0.55
HNRNPU-219ENST00000639628 PPP1R15AO75807 674 aaPredicted RBP11.59□□□□□ -0.55
HNRNPU-219ENST00000639628 KDM2AQ9Y2K7 1162 aa11.59□□□□□ -0.55
HNRNPU-219ENST00000639628 CCDC136Q96JN2 1154 aa11.59□□□□□ -0.55
HNRNPU-219ENST00000639628 IRX6P78412 446 aaPredicted RBP11.59□□□□□ -0.55
HNRNPU-219ENST00000639628 IGF1RP08069 1367 aa11.58□□□□□ -0.56
HNRNPU-219ENST00000639628 TDRD9Q8NDG6 1382 aaKnown RBP11.58□□□□□ -0.56
HNRNPU-219ENST00000639628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.56□□□□□ -0.562e-14■■□□□ 13.7
HNRNPU-219ENST00000639628 TOP2BQ02880 1626 aa11.56□□□□□ -0.56
HNRNPU-219ENST00000639628 FANCD2Q9BXW9 1451 aa11.55□□□□□ -0.56
HNRNPU-219ENST00000639628 PRXQ9BXM0 1461 aa11.55□□□□□ -0.56
HNRNPU-219ENST00000639628 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
HNRNPU-219ENST00000639628 CANXP27824 592 aaKnown RBP11.54□□□□□ -0.56
HNRNPU-219ENST00000639628 HSPA5P11021 654 aaKnown RBP11.52□□□□□ -0.56
HNRNPU-219ENST00000639628 CFTRP13569 1480 aa11.52□□□□□ -0.57
HNRNPU-219ENST00000639628 ARAP1Q96P48 1450 aa11.52□□□□□ -0.57
HNRNPU-219ENST00000639628 RRBP1Q9P2E9 1410 aaKnown RBP11.52□□□□□ -0.57
HNRNPU-219ENST00000639628 SALL2Q9Y467 1007 aaPredicted RBP11.52□□□□□ -0.57
HNRNPU-219ENST00000639628 CARD11Q9BXL7 1154 aa11.51□□□□□ -0.57
HNRNPU-219ENST00000639628 NPM2Q86SE8 214 aaKnown RBP11.5□□□□□ -0.57
HNRNPU-219ENST00000639628 ANP32EQ9BTT0 268 aa11.5□□□□□ -0.57
HNRNPU-219ENST00000639628 PPP4R2Q9NY27 417 aa11.5□□□□□ -0.57
HNRNPU-219ENST00000639628 HMGXB3Q12766 1538 aa11.5□□□□□ -0.57
HNRNPU-219ENST00000639628 MPHOSPH9Q99550 1183 aa11.5□□□□□ -0.57
HNRNPU-219ENST00000639628 LRRC9Q6ZRR7 1453 aa11.49□□□□□ -0.57
HNRNPU-219ENST00000639628 BICRAQ9NZM4 1560 aa11.48□□□□□ -0.57
HNRNPU-219ENST00000639628 WDR43Q15061 677 aaKnown RBP eCLIP11.48□□□□□ -0.572e-6■■□□□ 13.5
HNRNPU-219ENST00000639628 PEG3Q9GZU2 1588 aa11.48□□□□□ -0.57
HNRNPU-219ENST00000639628 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.47□□□□□ -0.57
HNRNPU-219ENST00000639628 ERCC6Q03468 1493 aa11.46□□□□□ -0.57
HNRNPU-219ENST00000639628 PHLDB1Q86UU1 1377 aa11.46□□□□□ -0.57
HNRNPU-219ENST00000639628 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.58
HNRNPU-219ENST00000639628 CUX1P39880 1505 aa11.46□□□□□ -0.58
HNRNPU-219ENST00000639628 CCDC18Q5T9S5 1454 aa11.45□□□□□ -0.58
HNRNPU-219ENST00000639628 RGL3Q3MIN7 710 aa11.45□□□□□ -0.58
HNRNPU-219ENST00000639628 ERICH6BQ5W0A0 696 aa11.44□□□□□ -0.58
HNRNPU-219ENST00000639628 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
HNRNPU-219ENST00000639628 NEFMP07197 916 aa11.43□□□□□ -0.58
HNRNPU-219ENST00000639628 FOXD1Q16676 465 aa11.43□□□□□ -0.58
HNRNPU-219ENST00000639628 CARMIL2Q6F5E8 1435 aa11.43□□□□□ -0.58
HNRNPU-219ENST00000639628 FGD6Q6ZV73 1430 aa11.43□□□□□ -0.58
HNRNPU-219ENST00000639628 RAD54L2Q9Y4B4 1467 aa11.43□□□□□ -0.58
HNRNPU-219ENST00000639628 CASKIN1Q8WXD9 1431 aa11.42□□□□□ -0.58
HNRNPU-219ENST00000639628 L3MBTL2Q969R5 705 aa11.42□□□□□ -0.58
HNRNPU-219ENST00000639628 KCNH8Q96L42 1107 aa11.42□□□□□ -0.58
HNRNPU-219ENST00000639628 NPM1P06748 294 aaKnown RBP eCLIP11.41□□□□□ -0.58
HNRNPU-219ENST00000639628 PKD2Q13563 968 aa11.41□□□□□ -0.58
HNRNPU-219ENST00000639628 CDCA8Q53HL2 280 aa11.41□□□□□ -0.58
HNRNPU-219ENST00000639628 TSHZ2Q9NRE2 1034 aa11.4□□□□□ -0.58
HNRNPU-219ENST00000639628 ANKRD30AQ9BXX3 1397 aa11.4□□□□□ -0.58
HNRNPU-219ENST00000639628 GAPVD1Q14C86 1478 aa11.4□□□□□ -0.58
HNRNPU-219ENST00000639628 SLC24A1O60721 1099 aa11.4□□□□□ -0.58
HNRNPU-219ENST00000639628 FYCO1Q9BQS8 1478 aa11.4□□□□□ -0.58
HNRNPU-219ENST00000639628 DCAF11Q8TEB1 546 aa11.39□□□□□ -0.59
HNRNPU-219ENST00000639628 MYOM3Q5VTT5 1437 aa11.39□□□□□ -0.59
HNRNPU-219ENST00000639628 RBM19Q9Y4C8 960 aaKnown RBP11.39□□□□□ -0.59
HNRNPU-219ENST00000639628 UACAQ9BZF9 1416 aa11.39□□□□□ -0.59
HNRNPU-219ENST00000639628 UNC13AQ9UPW8 1703 aa11.39□□□□□ -0.59
HNRNPU-219ENST00000639628 KNSTRNQ9Y448 316 aa11.38□□□□□ -0.59
HNRNPU-219ENST00000639628 TIAM1Q13009 1591 aa11.38□□□□□ -0.59
HNRNPU-219ENST00000639628 EFCAB5A4FU69 1503 aa11.38□□□□□ -0.59
HNRNPU-219ENST00000639628 NBR1Q14596 966 aa11.37□□□□□ -0.59
HNRNPU-219ENST00000639628 B4GALNT3Q6L9W6 998 aa11.37□□□□□ -0.59
HNRNPU-219ENST00000639628 NUP155O75694 1391 aa11.36□□□□□ -0.59
HNRNPU-219ENST00000639628 UPF2Q9HAU5 1272 aaKnown RBP11.35□□□□□ -0.59
HNRNPU-219ENST00000639628 SENP3-EIF4A1A0A087X0R7 540 aa11.35□□□□□ -0.59
HNRNPU-219ENST00000639628 NCOA2Q15596 1464 aa11.33□□□□□ -0.6
HNRNPU-219ENST00000639628 TMF1P82094 1093 aa11.33□□□□□ -0.6
HNRNPU-219ENST00000639628 BIVM-ERCC5R4GMW8 1640 aa11.33□□□□□ -0.6
HNRNPU-219ENST00000639628 ROCK2O75116 1388 aaKnown RBP11.32□□□□□ -0.6
HNRNPU-219ENST00000639628 RALBP1Q15311 655 aa11.31□□□□□ -0.6
HNRNPU-219ENST00000639628 DDRGK1Q96HY6 314 aa11.31□□□□□ -0.6
HNRNPU-219ENST00000639628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.31□□□□□ -0.6
HNRNPU-219ENST00000639628 MAP3K1Q13233 1512 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms