RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 AQRO60306 1485 aaKnown RBP eCLIP7.63□□□□□ -1.19
CCDC7-213ENST00000639290 FBLN2P98095 1184 aa7.62□□□□□ -1.19
CCDC7-213ENST00000639290 GLI2P10070 1586 aa7.62□□□□□ -1.19
CCDC7-213ENST00000639290 MROH2BQ7Z745 1585 aa7.61□□□□□ -1.19
CCDC7-213ENST00000639290 CEP170Q5SW79 1584 aa7.58□□□□□ -1.2
CCDC7-213ENST00000639290 CHMP7Q8WUX9 453 aaPredicted RBP7.58□□□□□ -1.2
CCDC7-213ENST00000639290 PPRC1Q5VV67 1664 aaKnown RBP7.56□□□□□ -1.2
CCDC7-213ENST00000639290 GRIN2BQ13224 1484 aa7.56□□□□□ -1.2
CCDC7-213ENST00000639290 NPM1P06748 294 aaKnown RBP eCLIP7.54□□□□□ -1.2
CCDC7-213ENST00000639290 TSPOAP1O95153 1857 aa7.54□□□□□ -1.2
CCDC7-213ENST00000639290 TEX14Q8IWB6 1497 aa7.54□□□□□ -1.2
CCDC7-213ENST00000639290 KIAA0586Q9BVV6 1533 aa7.54□□□□□ -1.2
CCDC7-213ENST00000639290 PTPRMP28827 1452 aa7.53□□□□□ -1.2
CCDC7-213ENST00000639290 ADAMTSL3P82987 1691 aa7.53□□□□□ -1.2
CCDC7-213ENST00000639290 MED1Q15648 1581 aaPredicted RBP7.52□□□□□ -1.21
CCDC7-213ENST00000639290 NUP160Q12769 1436 aa7.5□□□□□ -1.21
CCDC7-213ENST00000639290 POLA1P09884 1462 aaPredicted RBP7.49□□□□□ -1.21
CCDC7-213ENST00000639290 ADCY10Q96PN6 1610 aa7.47□□□□□ -1.21
CCDC7-213ENST00000639290 DMRT2Q9Y5R5 561 aa7.47□□□□□ -1.21
CCDC7-213ENST00000639290 PBRM1Q86U86 1689 aa7.45□□□□□ -1.22
CCDC7-213ENST00000639290 MAP3K4Q9Y6R4 1608 aa7.45□□□□□ -1.22
CCDC7-213ENST00000639290 PLB1Q6P1J6 1458 aa7.45□□□□□ -1.22
CCDC7-213ENST00000639290 COL17A1Q9UMD9 1497 aaPredicted RBP7.44□□□□□ -1.22
CCDC7-213ENST00000639290 GRIN2AQ12879 1464 aa7.43□□□□□ -1.22
CCDC7-213ENST00000639290 LTBP4Q8N2S1 1624 aa7.43□□□□□ -1.22
CCDC7-213ENST00000639290 PTPRTO14522 1441 aa7.42□□□□□ -1.22
CCDC7-213ENST00000639290 SOGA1O94964 1423 aa7.41□□□□□ -1.22
CCDC7-213ENST00000639290 IFFO2Q5TF58 517 aa7.4□□□□□ -1.22
CCDC7-213ENST00000639290 KIF21BO75037 1637 aa7.4□□□□□ -1.22
CCDC7-213ENST00000639290 CFAP43Q8NDM7 1665 aa7.4□□□□□ -1.22
CCDC7-213ENST00000639290 BCORL1Q5H9F3 1711 aa7.39□□□□□ -1.23
CCDC7-213ENST00000639290 TDRD9Q8NDG6 1382 aaKnown RBP7.39□□□□□ -1.23
CCDC7-213ENST00000639290 YEATS2Q9ULM3 1422 aa7.38□□□□□ -1.23
CCDC7-213ENST00000639290 PRG4Q92954 1404 aaPredicted RBP7.37□□□□□ -1.23
CCDC7-213ENST00000639290 RAD54L2Q9Y4B4 1467 aa7.35□□□□□ -1.23
CCDC7-213ENST00000639290 TOP2AP11388 1531 aaKnown RBP7.35□□□□□ -1.23
CCDC7-213ENST00000639290 ADAMTS12P58397 1594 aa7.35□□□□□ -1.23
CCDC7-213ENST00000639290 ABCA5Q8WWZ7 1642 aa7.35□□□□□ -1.23
CCDC7-213ENST00000639290 MADDQ8WXG6 1647 aa7.34□□□□□ -1.23
CCDC7-213ENST00000639290 MAGI3Q5TCQ9 1506 aa7.33□□□□□ -1.24
CCDC7-213ENST00000639290 PREX1Q8TCU6 1659 aa7.33□□□□□ -1.24
CCDC7-213ENST00000639290 WIZO95785 1651 aa7.33□□□□□ -1.24
CCDC7-213ENST00000639290 ABCC2Q92887 1545 aa7.32□□□□□ -1.24
CCDC7-213ENST00000639290 EPRSP07814 1512 aaKnown RBP7.32□□□□□ -1.24
CCDC7-213ENST00000639290 STRCQ7RTU9 1775 aa7.31□□□□□ -1.24
CCDC7-213ENST00000639290 ASXL2Q76L83 1435 aa7.31□□□□□ -1.24
CCDC7-213ENST00000639290 ARAP3Q8WWN8 1544 aa7.3□□□□□ -1.24
CCDC7-213ENST00000639290 UHRF1BP1LA0JNW5 1464 aa7.3□□□□□ -1.24
CCDC7-213ENST00000639290 PHLDB1Q86UU1 1377 aa7.29□□□□□ -1.24
CCDC7-213ENST00000639290 FGD5Q6ZNL6 1462 aa7.28□□□□□ -1.24
CCDC7-213ENST00000639290 RIMS1Q86UR5 1692 aaKnown RBP7.28□□□□□ -1.24
CCDC7-213ENST00000639290 FHAD1B1AJZ9 1412 aa7.28□□□□□ -1.24
CCDC7-213ENST00000639290 ABCA10Q8WWZ4 1543 aa7.27□□□□□ -1.25
CCDC7-213ENST00000639290 TTC37Q6PGP7 1564 aa7.26□□□□□ -1.25
CCDC7-213ENST00000639290 RUSC2Q8N2Y8 1516 aa7.26□□□□□ -1.25
CCDC7-213ENST00000639290 HSPA2P54652 639 aa7.25□□□□□ -1.25
CCDC7-213ENST00000639290 JPH4Q96JJ6 628 aa7.24□□□□□ -1.25
CCDC7-213ENST00000639290 POGZQ7Z3K3 1410 aa7.22□□□□□ -1.25
CCDC7-213ENST00000639290 CUL7Q14999 1698 aa7.21□□□□□ -1.26
CCDC7-213ENST00000639290 UBAP1LF5GYI3 381 aa7.21□□□□□ -1.26
CCDC7-213ENST00000639290 ERICH3Q5RHP9 1530 aa7.2□□□□□ -1.26
CCDC7-213ENST00000639290 KDM5BQ9UGL1 1544 aa7.2□□□□□ -1.26
CCDC7-213ENST00000639290 SCAF1Q9H7N4 1312 aaKnown RBP7.19□□□□□ -1.26
CCDC7-213ENST00000639290 ARHGEF40Q8TER5 1519 aa7.18□□□□□ -1.26
CCDC7-213ENST00000639290 FANCAO15360 1455 aa7.17□□□□□ -1.26
CCDC7-213ENST00000639290 HSPA1LP34931 641 aa7.17□□□□□ -1.26
CCDC7-213ENST00000639290 UHRF1BP1Q6BDS2 1440 aa7.16□□□□□ -1.26
CCDC7-213ENST00000639290 FER1L4A9Z1Z3 1794 aa7.15□□□□□ -1.27
CCDC7-213ENST00000639290 WDR7Q9Y4E6 1490 aa7.15□□□□□ -1.27
CCDC7-213ENST00000639290 CACNB1Q02641 598 aaPredicted RBP7.15□□□□□ -1.27
CCDC7-213ENST00000639290 KIAA0556O60303 1618 aa7.14□□□□□ -1.27
CCDC7-213ENST00000639290 PTPRGP23470 1445 aa7.14□□□□□ -1.27
CCDC7-213ENST00000639290 CD109Q6YHK3 1445 aa7.14□□□□□ -1.27
CCDC7-213ENST00000639290 PCDH10Q9P2E7 1040 aa7.14□□□□□ -1.27
CCDC7-213ENST00000639290 CUX1P39880 1505 aa7.14□□□□□ -1.27
CCDC7-213ENST00000639290 CCDC88BA6NC98 1476 aa7.14□□□□□ -1.27
CCDC7-213ENST00000639290 SETD1BQ9UPS6 1966 aaKnown RBP7.14□□□□□ -1.27
CCDC7-213ENST00000639290 NCOA1Q15788 1441 aa7.13□□□□□ -1.27
CCDC7-213ENST00000639290 CPS1P31327 1500 aa7.13□□□□□ -1.27
CCDC7-213ENST00000639290 PTPRKQ15262 1439 aa7.12□□□□□ -1.27
CCDC7-213ENST00000639290 TOM1O60784 492 aa7.12□□□□□ -1.27
CCDC7-213ENST00000639290 RGS17Q9UGC6 210 aaPredicted RBP7.12□□□□□ -1.27
CCDC7-213ENST00000639290 TNIKQ9UKE5 1360 aa7.12□□□□□ -1.27
CCDC7-213ENST00000639290 ZCCHC11Q5TAX3 1644 aaKnown RBP7.12□□□□□ -1.27
CCDC7-213ENST00000639290 UACAQ9BZF9 1416 aa7.11□□□□□ -1.27
CCDC7-213ENST00000639290 UPF1Q92900 1129 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCDC7-213ENST00000639290 NEO1Q92859 1461 aa7.11□□□□□ -1.27
CCDC7-213ENST00000639290 ARHGEF12Q9NZN5 1544 aa7.1□□□□□ -1.27
CCDC7-213ENST00000639290 LRP5O75197 1615 aa7.09□□□□□ -1.27
CCDC7-213ENST00000639290 SETD1AO15047 1707 aaKnown RBP7.08□□□□□ -1.28
CCDC7-213ENST00000639290 FRMPD1Q5SYB0 1578 aa7.08□□□□□ -1.28
CCDC7-213ENST00000639290 CARMIL2Q6F5E8 1435 aa7.08□□□□□ -1.28
CCDC7-213ENST00000639290 CDK12Q9NYV4 1490 aaPredicted RBP7.08□□□□□ -1.28
CCDC7-213ENST00000639290 AKNAQ7Z591 1439 aa7.08□□□□□ -1.28
CCDC7-213ENST00000639290 ZMYM4Q5VZL5 1548 aa7.07□□□□□ -1.28
CCDC7-213ENST00000639290 POTEHQ6S545 545 aa7.06□□□□□ -1.28
CCDC7-213ENST00000639290 MAGI2Q86UL8 1455 aa7.06□□□□□ -1.28
CCDC7-213ENST00000639290 ARID4BQ4LE39 1312 aaPredicted RBP7.06□□□□□ -1.28
CCDC7-213ENST00000639290 MAPK8IP2Q13387 824 aaPredicted RBP7.06□□□□□ -1.28
CCDC7-213ENST00000639290 EFCAB5A4FU69 1503 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms