RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
NECAP1-216ENST00000639167 FHOD3Q2V2M9 1422 aa15.62■□□□□ 0.09
NECAP1-216ENST00000639167 CLSPNQ9HAW4 1339 aa15.62■□□□□ 0.09
NECAP1-216ENST00000639167 LRRC9Q6ZRR7 1453 aa15.61■□□□□ 0.09
NECAP1-216ENST00000639167 MAP3K1Q13233 1512 aa15.61■□□□□ 0.09
NECAP1-216ENST00000639167 CENPBP07199 599 aaPredicted RBP15.6■□□□□ 0.09
NECAP1-216ENST00000639167 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
NECAP1-216ENST00000639167 LAMC3Q9Y6N6 1575 aa15.6■□□□□ 0.09
NECAP1-216ENST00000639167 PCF11O94913 1555 aaKnown RBP15.6■□□□□ 0.09
NECAP1-216ENST00000639167 MIER1Q8N108 512 aa15.59■□□□□ 0.09
NECAP1-216ENST00000639167 PHLDB1Q86UU1 1377 aa15.58■□□□□ 0.09
NECAP1-216ENST00000639167 TDRD9Q8NDG6 1382 aaKnown RBP15.58■□□□□ 0.08
NECAP1-216ENST00000639167 CUL7Q14999 1698 aa15.57■□□□□ 0.08
NECAP1-216ENST00000639167 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
NECAP1-216ENST00000639167 FAM50AQ14320 339 aaKnown RBP15.55■□□□□ 0.08
NECAP1-216ENST00000639167 CFAP43Q8NDM7 1665 aa15.55■□□□□ 0.08
NECAP1-216ENST00000639167 RAB3GAP2Q9H2M9 1393 aa15.54■□□□□ 0.08
NECAP1-216ENST00000639167 WDR97A6NE52 1622 aa15.54■□□□□ 0.08
NECAP1-216ENST00000639167 CTTNBP2Q8WZ74 1663 aa15.53■□□□□ 0.08
NECAP1-216ENST00000639167 EFCAB5A4FU69 1503 aa15.52■□□□□ 0.08
NECAP1-216ENST00000639167 PDS5BQ9NTI5 1447 aa15.52■□□□□ 0.08
NECAP1-216ENST00000639167 GTF3C3Q9Y5Q9 886 aa15.51■□□□□ 0.07
NECAP1-216ENST00000639167 FYCO1Q9BQS8 1478 aa15.5■□□□□ 0.07
NECAP1-216ENST00000639167 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
NECAP1-216ENST00000639167 CASKIN1Q8WXD9 1431 aa15.49■□□□□ 0.07
NECAP1-216ENST00000639167 ABCA5Q8WWZ7 1642 aa15.49■□□□□ 0.07
NECAP1-216ENST00000639167 KIF21AQ7Z4S6 1674 aa15.49■□□□□ 0.07
NECAP1-216ENST00000639167 SETD5Q9C0A6 1442 aa15.48■□□□□ 0.07
NECAP1-216ENST00000639167 AQRO60306 1485 aaKnown RBP eCLIP15.46■□□□□ 0.076e-7■■■■■ 30.6
NECAP1-216ENST00000639167 MYT1Q01538 1121 aa15.45■□□□□ 0.06
NECAP1-216ENST00000639167 MAPKBP1O60336 1514 aa15.45■□□□□ 0.06
NECAP1-216ENST00000639167 FMN1Q68DA7 1419 aa15.45■□□□□ 0.06
NECAP1-216ENST00000639167 SNAPC4Q5SXM2 1469 aa15.42■□□□□ 0.06
NECAP1-216ENST00000639167 SAMD9Q5K651 1589 aa15.4■□□□□ 0.06
NECAP1-216ENST00000639167 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
NECAP1-216ENST00000639167 MTUS2Q5JR59 1369 aa15.39■□□□□ 0.05
NECAP1-216ENST00000639167 SIN3AQ96ST3 1273 aa15.38■□□□□ 0.05
NECAP1-216ENST00000639167 FGD6Q6ZV73 1430 aa15.36■□□□□ 0.05
NECAP1-216ENST00000639167 LRRIQ1Q96JM4 1722 aa15.36■□□□□ 0.05
NECAP1-216ENST00000639167 GRIN2BQ13224 1484 aa15.34■□□□□ 0.05
NECAP1-216ENST00000639167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.33■□□□□ 0.05
NECAP1-216ENST00000639167 PBRM1Q86U86 1689 aa15.31■□□□□ 0.04
NECAP1-216ENST00000639167 NCOA2Q15596 1464 aa15.31■□□□□ 0.04
NECAP1-216ENST00000639167 MRC2Q9UBG0 1479 aa15.3■□□□□ 0.04
NECAP1-216ENST00000639167 PTPRKQ15262 1439 aa15.29■□□□□ 0.04
NECAP1-216ENST00000639167 MYOM3Q5VTT5 1437 aa15.27■□□□□ 0.04
NECAP1-216ENST00000639167 ADAMTS12P58397 1594 aa15.27■□□□□ 0.03
NECAP1-216ENST00000639167 THOC2Q8NI27 1593 aaKnown RBP15.27■□□□□ 0.03
NECAP1-216ENST00000639167 MAGI3Q5TCQ9 1506 aa15.26■□□□□ 0.03
NECAP1-216ENST00000639167 EHBP1L1Q8N3D4 1523 aa15.26■□□□□ 0.03
NECAP1-216ENST00000639167 SUPT6HQ7KZ85 1726 aaKnown RBP15.26■□□□□ 0.03
NECAP1-216ENST00000639167 ARID3CA6NKF2 412 aa15.25■□□□□ 0.03
NECAP1-216ENST00000639167 CCDC18Q5T9S5 1454 aa15.25■□□□□ 0.03
NECAP1-216ENST00000639167 IQGAP2Q13576 1575 aa15.25■□□□□ 0.03
NECAP1-216ENST00000639167 ZNF608Q9ULD9 1512 aaPredicted RBP15.24■□□□□ 0.03
NECAP1-216ENST00000639167 HFM1A2PYH4 1435 aa15.23■□□□□ 0.03
NECAP1-216ENST00000639167 UGGT2Q9NYU1 1516 aa15.22■□□□□ 0.03
NECAP1-216ENST00000639167 PTPN23Q9H3S7 1636 aa15.22■□□□□ 0.03
NECAP1-216ENST00000639167 PELP1Q8IZL8 1130 aaKnown RBP15.22■□□□□ 0.03
NECAP1-216ENST00000639167 HECW1Q76N89 1606 aa15.21■□□□□ 0.02
NECAP1-216ENST00000639167 NAIPQ13075 1403 aa15.2■□□□□ 0.02
NECAP1-216ENST00000639167 CDK13Q14004 1512 aaKnown RBP15.2■□□□□ 0.02
NECAP1-216ENST00000639167 PPP1R15AO75807 674 aaPredicted RBP15.19■□□□□ 0.02
NECAP1-216ENST00000639167 HIRIP3Q9BW71 556 aaPredicted RBP15.19■□□□□ 0.02
NECAP1-216ENST00000639167 CHIC2Q9UKJ5 165 aa15.19■□□□□ 0.02
NECAP1-216ENST00000639167 TIMELESSQ9UNS1 1208 aa15.19■□□□□ 0.02
NECAP1-216ENST00000639167 IFT140Q96RY7 1462 aa15.19■□□□□ 0.02
NECAP1-216ENST00000639167 ARHGEF11O15085 1522 aa15.19■□□□□ 0.02
NECAP1-216ENST00000639167 EPRSP07814 1512 aaKnown RBP15.19■□□□□ 0.02
NECAP1-216ENST00000639167 UACAQ9BZF9 1416 aa15.18■□□□□ 0.02
NECAP1-216ENST00000639167 RRP7BPQ9NSQ0 103 aa15.18■□□□□ 0.02
NECAP1-216ENST00000639167 DDX10Q13206 875 aaKnown RBP15.18■□□□□ 0.02
NECAP1-216ENST00000639167 TONSLQ96HA7 1378 aa15.16■□□□□ 0.02
NECAP1-216ENST00000639167 WDR62O43379 1518 aa15.15■□□□□ 0.02
NECAP1-216ENST00000639167 KCNH8Q96L42 1107 aa15.15■□□□□ 0.02
NECAP1-216ENST00000639167 TCOF1Q13428 1488 aaKnown RBP15.13■□□□□ 0.01
NECAP1-216ENST00000639167 KIAA0586Q9BVV6 1533 aa15.11■□□□□ 0.01
NECAP1-216ENST00000639167 DAXXQ9UER7 740 aaPredicted RBP15.11■□□□□ 0.01
NECAP1-216ENST00000639167 TRIM52Q96A61 297 aa15.1■□□□□ 0.01
NECAP1-216ENST00000639167 DISP1Q96F81 1524 aa15.1■□□□□ 0.01
NECAP1-216ENST00000639167 EIF4G3O43432 1585 aaKnown RBP15.1■□□□□ 0.01
NECAP1-216ENST00000639167 KIAA0556O60303 1618 aa15.1■□□□□ 0.01
NECAP1-216ENST00000639167 ERCC6Q03468 1493 aa15.1■□□□□ 0.01
NECAP1-216ENST00000639167 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
NECAP1-216ENST00000639167 KDM6BO15054 1643 aa15.07■□□□□ 0
NECAP1-216ENST00000639167 MIA2Q96PC5 1412 aa15.07■□□□□ 0
NECAP1-216ENST00000639167 GCC2Q8IWJ2 1684 aa15.06■□□□□ 0
NECAP1-216ENST00000639167 FBLN2P98095 1184 aa15.05■□□□□ 0
NECAP1-216ENST00000639167 NUP153P49790 1475 aaKnown RBP15.05■□□□□ -0
NECAP1-216ENST00000639167 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ -0
NECAP1-216ENST00000639167 DENND4BO75064 1496 aaPredicted RBP15.03■□□□□ -0
NECAP1-216ENST00000639167 ZNF644Q9H582 1327 aaPredicted RBP15.03■□□□□ -0
NECAP1-216ENST00000639167 RAPGEF6Q8TEU7 1601 aa15.03■□□□□ -0
NECAP1-216ENST00000639167 AKNAQ7Z591 1439 aa15.02■□□□□ -0
NECAP1-216ENST00000639167 KDM5BQ9UGL1 1544 aa15.02□□□□□ -0.01
NECAP1-216ENST00000639167 FOXD1Q16676 465 aa15.01□□□□□ -0.01
NECAP1-216ENST00000639167 MPHOSPH9Q99550 1183 aa15.01□□□□□ -0.01
NECAP1-216ENST00000639167 DAPK1P53355 1430 aa15□□□□□ -0.01
NECAP1-216ENST00000639167 CEP170Q5SW79 1584 aa15□□□□□ -0.01
NECAP1-216ENST00000639167 MAGI1Q96QZ7 1491 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms