RNA–Protein interactions for RNA: ENST00000639069.1

KCNMA1-250, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 3,899 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-250ENST00000639069 EIF4G3O43432 1585 aaKnown RBP12.38□□□□□ -0.43
KCNMA1-250ENST00000639069 ADAMTS12P58397 1594 aa12.37□□□□□ -0.43
KCNMA1-250ENST00000639069 SCAF1Q9H7N4 1312 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-250ENST00000639069 AQRO60306 1485 aaKnown RBP eCLIP12.34□□□□□ -0.43
KCNMA1-250ENST00000639069 SYNJ2O15056 1496 aa12.33□□□□□ -0.44
KCNMA1-250ENST00000639069 ZNF608Q9ULD9 1512 aaPredicted RBP12.31□□□□□ -0.44
KCNMA1-250ENST00000639069 SNAPC4Q5SXM2 1469 aa12.31□□□□□ -0.44
KCNMA1-250ENST00000639069 LOC105371045A0A1W2PR82 267 aa12.31□□□□□ -0.44
KCNMA1-250ENST00000639069 EFCAB5A4FU69 1503 aa12.3□□□□□ -0.44
KCNMA1-250ENST00000639069 CEP162Q5TB80 1403 aa12.29□□□□□ -0.44
KCNMA1-250ENST00000639069 CHMP7Q8WUX9 453 aaPredicted RBP12.29□□□□□ -0.44
KCNMA1-250ENST00000639069 CTTNBP2Q8WZ74 1663 aa12.28□□□□□ -0.44
KCNMA1-250ENST00000639069 CLIP1P30622 1438 aa12.28□□□□□ -0.44
KCNMA1-250ENST00000639069 EHMT2Q96KQ7 1210 aa12.28□□□□□ -0.44
KCNMA1-250ENST00000639069 GRIN2AQ12879 1464 aa12.27□□□□□ -0.45
KCNMA1-250ENST00000639069 PPARGC1BQ86YN6 1023 aaKnown RBP12.25□□□□□ -0.45
KCNMA1-250ENST00000639069 PODXL2Q9NZ53 605 aa12.25□□□□□ -0.45
KCNMA1-250ENST00000639069 KIAA0586Q9BVV6 1533 aa12.24□□□□□ -0.45
KCNMA1-250ENST00000639069 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
KCNMA1-250ENST00000639069 IQGAP2Q13576 1575 aa12.22□□□□□ -0.45
KCNMA1-250ENST00000639069 NUP160Q12769 1436 aa12.21□□□□□ -0.46
KCNMA1-250ENST00000639069 CARMIL2Q6F5E8 1435 aa12.19□□□□□ -0.46
KCNMA1-250ENST00000639069 UGGT2Q9NYU1 1516 aa12.18□□□□□ -0.46
KCNMA1-250ENST00000639069 FMN1Q68DA7 1419 aa12.17□□□□□ -0.46
KCNMA1-250ENST00000639069 VPS8Q8N3P4 1428 aa12.17□□□□□ -0.46
KCNMA1-250ENST00000639069 FBLN2P98095 1184 aa12.15□□□□□ -0.46
KCNMA1-250ENST00000639069 SAMD9Q5K651 1589 aa12.13□□□□□ -0.47
KCNMA1-250ENST00000639069 ARHGAP35Q9NRY4 1499 aa12.12□□□□□ -0.47
KCNMA1-250ENST00000639069 GTF3C3Q9Y5Q9 886 aa12.12□□□□□ -0.47
KCNMA1-250ENST00000639069 CHD1O14646 1710 aa12.11□□□□□ -0.47
KCNMA1-250ENST00000639069 CEP170Q5SW79 1584 aa12.1□□□□□ -0.47
KCNMA1-250ENST00000639069 MAP3K1Q13233 1512 aa12.1□□□□□ -0.47
KCNMA1-250ENST00000639069 ARAP1Q96P48 1450 aa12.09□□□□□ -0.47
KCNMA1-250ENST00000639069 FYCO1Q9BQS8 1478 aa12.08□□□□□ -0.48
KCNMA1-250ENST00000639069 JPH4Q96JJ6 628 aa12.07□□□□□ -0.48
KCNMA1-250ENST00000639069 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
KCNMA1-250ENST00000639069 KIAA0556O60303 1618 aa12.06□□□□□ -0.48
KCNMA1-250ENST00000639069 PCGF6Q9BYE7 350 aa12.06□□□□□ -0.48
KCNMA1-250ENST00000639069 CCDC18Q5T9S5 1454 aa12.05□□□□□ -0.48
KCNMA1-250ENST00000639069 CLASP1Q7Z460 1538 aa12.05□□□□□ -0.48
KCNMA1-250ENST00000639069 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
KCNMA1-250ENST00000639069 SHROOM2Q13796 1616 aa12.04□□□□□ -0.48
KCNMA1-250ENST00000639069 HECW1Q76N89 1606 aa12.03□□□□□ -0.48
KCNMA1-250ENST00000639069 ANP32EQ9BTT0 268 aa12.03□□□□□ -0.48
KCNMA1-250ENST00000639069 FHOD3Q2V2M9 1422 aa12.02□□□□□ -0.49
KCNMA1-250ENST00000639069 CDK11AQ9UQ88 783 aaPredicted RBP12.01□□□□□ -0.49
KCNMA1-250ENST00000639069 PRG4Q92954 1404 aaPredicted RBP12□□□□□ -0.49
KCNMA1-250ENST00000639069 DISP1Q96F81 1524 aa12□□□□□ -0.49
KCNMA1-250ENST00000639069 PTPRGP23470 1445 aa11.97□□□□□ -0.49
KCNMA1-250ENST00000639069 CFAP43Q8NDM7 1665 aa11.96□□□□□ -0.5
KCNMA1-250ENST00000639069 PCF11O94913 1555 aaKnown RBP11.95□□□□□ -0.5
KCNMA1-250ENST00000639069 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
KCNMA1-250ENST00000639069 P3H3Q8IVL6 736 aa11.95□□□□□ -0.5
KCNMA1-250ENST00000639069 RAPGEF6Q8TEU7 1601 aa11.95□□□□□ -0.5
KCNMA1-250ENST00000639069 TIAM1Q13009 1591 aa11.95□□□□□ -0.5
KCNMA1-250ENST00000639069 PKNOX2Q96KN3 472 aa11.95□□□□□ -0.5
KCNMA1-250ENST00000639069 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
KCNMA1-250ENST00000639069 NEFLP07196 543 aa11.92□□□□□ -0.5
KCNMA1-250ENST00000639069 EHBP1L1Q8N3D4 1523 aa11.92□□□□□ -0.5
KCNMA1-250ENST00000639069 UHRF1BP1LA0JNW5 1464 aa11.92□□□□□ -0.5
KCNMA1-250ENST00000639069 ACIN1Q9UKV3 1341 aaKnown RBP11.91□□□□□ -0.5
KCNMA1-250ENST00000639069 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
KCNMA1-250ENST00000639069 UACAQ9BZF9 1416 aa11.91□□□□□ -0.5
KCNMA1-250ENST00000639069 ABCA8O94911 1581 aa11.9□□□□□ -0.5
KCNMA1-250ENST00000639069 MTUS2Q5JR59 1369 aa11.9□□□□□ -0.5
KCNMA1-250ENST00000639069 CCDC136Q96JN2 1154 aa11.9□□□□□ -0.5
KCNMA1-250ENST00000639069 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
KCNMA1-250ENST00000639069 EPRSP07814 1512 aaKnown RBP11.88□□□□□ -0.51
KCNMA1-250ENST00000639069 ABCC2Q92887 1545 aa11.87□□□□□ -0.51
KCNMA1-250ENST00000639069 SUPT6HQ7KZ85 1726 aaKnown RBP11.85□□□□□ -0.51
KCNMA1-250ENST00000639069 GLIPR1L2Q4G1C9 344 aa11.85□□□□□ -0.51
KCNMA1-250ENST00000639069 PLEKHD1A6NEE1 506 aa11.84□□□□□ -0.51
KCNMA1-250ENST00000639069 NPM1P06748 294 aaKnown RBP eCLIP11.84□□□□□ -0.51
KCNMA1-250ENST00000639069 PLPPR3Q6T4P5 718 aa11.84□□□□□ -0.51
KCNMA1-250ENST00000639069 NUP153P49790 1475 aaKnown RBP11.84□□□□□ -0.51
KCNMA1-250ENST00000639069 TROQ12816 1431 aaPredicted RBP11.83□□□□□ -0.52
KCNMA1-250ENST00000639069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
KCNMA1-250ENST00000639069 HNRNPUL2Q1KMD3 747 aaKnown RBP11.83□□□□□ -0.52
KCNMA1-250ENST00000639069 A0A0U1RQG5 324 aaPredicted RBP11.82□□□□□ -0.52
KCNMA1-250ENST00000639069 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.81□□□□□ -0.52
KCNMA1-250ENST00000639069 PLB1Q6P1J6 1458 aa11.8□□□□□ -0.52
KCNMA1-250ENST00000639069 RTN4Q9NQC3 1192 aaKnown RBP11.8□□□□□ -0.52
KCNMA1-250ENST00000639069 ADCY10Q96PN6 1610 aa11.79□□□□□ -0.52
KCNMA1-250ENST00000639069 KDM5BQ9UGL1 1544 aa11.79□□□□□ -0.52
KCNMA1-250ENST00000639069 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
KCNMA1-250ENST00000639069 MIA2Q96PC5 1412 aa11.78□□□□□ -0.52
KCNMA1-250ENST00000639069 KIF14Q15058 1648 aa11.78□□□□□ -0.52
KCNMA1-250ENST00000639069 NCBP3Q53F19 620 aaKnown RBP11.77□□□□□ -0.52
KCNMA1-250ENST00000639069 ATP10BO94823 1461 aa11.77□□□□□ -0.52
KCNMA1-250ENST00000639069 RRBP1Q9P2E9 1410 aaKnown RBP11.77□□□□□ -0.53
KCNMA1-250ENST00000639069 UBE2Q2Q8WVN8 375 aa11.77□□□□□ -0.53
KCNMA1-250ENST00000639069 PDE4CQ08493 712 aa11.76□□□□□ -0.53
KCNMA1-250ENST00000639069 ITSN2Q9NZM3 1697 aa11.76□□□□□ -0.53
KCNMA1-250ENST00000639069 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
KCNMA1-250ENST00000639069 CCNB3Q8WWL7 1395 aa11.76□□□□□ -0.53
KCNMA1-250ENST00000639069 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
KCNMA1-250ENST00000639069 MYOM3Q5VTT5 1437 aa11.76□□□□□ -0.53
KCNMA1-250ENST00000639069 CDK13Q14004 1512 aaKnown RBP11.75□□□□□ -0.53
KCNMA1-250ENST00000639069 YTHDC1Q96MU7 727 aaKnown RBP11.75□□□□□ -0.53
KCNMA1-250ENST00000639069 NEUROD1Q13562 356 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms