RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 ABCA5Q8WWZ7 1642 aa20.34■□□□□ 0.85
SCN8A-215ENST00000638820 SNAPC4Q5SXM2 1469 aa20.31■□□□□ 0.84
SCN8A-215ENST00000638820 WDR97A6NE52 1622 aa20.29■□□□□ 0.84
SCN8A-215ENST00000638820 ARHGAP35Q9NRY4 1499 aa20.28■□□□□ 0.84
SCN8A-215ENST00000638820 ARAP1Q96P48 1450 aa20.28■□□□□ 0.84
SCN8A-215ENST00000638820 ARID3CA6NKF2 412 aa20.28■□□□□ 0.84
SCN8A-215ENST00000638820 FHOD3Q2V2M9 1422 aa20.27■□□□□ 0.84
SCN8A-215ENST00000638820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.27■□□□□ 0.84
SCN8A-215ENST00000638820 HNRNPUL2Q1KMD3 747 aaKnown RBP20.27■□□□□ 0.84
SCN8A-215ENST00000638820 EIF4G3O43432 1585 aaKnown RBP20.24■□□□□ 0.83
SCN8A-215ENST00000638820 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
SCN8A-215ENST00000638820 KANK4Q5T7N3 995 aaPredicted RBP20.18■□□□□ 0.82
SCN8A-215ENST00000638820 ADAMTS12P58397 1594 aa20.16■□□□□ 0.82
SCN8A-215ENST00000638820 MAGI1Q96QZ7 1491 aaPredicted RBP20.16■□□□□ 0.82
SCN8A-215ENST00000638820 ITGAEP38570 1179 aa20.16■□□□□ 0.82
SCN8A-215ENST00000638820 GRIN2AQ12879 1464 aa20.14■□□□□ 0.81
SCN8A-215ENST00000638820 JPH4Q96JJ6 628 aa20.14■□□□□ 0.81
SCN8A-215ENST00000638820 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
SCN8A-215ENST00000638820 FMN1Q68DA7 1419 aa20.12■□□□□ 0.81
SCN8A-215ENST00000638820 CTTNBP2Q8WZ74 1663 aa20.1■□□□□ 0.81
SCN8A-215ENST00000638820 IQGAP2Q13576 1575 aa20.07■□□□□ 0.8
SCN8A-215ENST00000638820 EFCAB5A4FU69 1503 aa20.07■□□□□ 0.8
SCN8A-215ENST00000638820 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
SCN8A-215ENST00000638820 KIAA0586Q9BVV6 1533 aa20.06■□□□□ 0.8
SCN8A-215ENST00000638820 MTUS2Q5JR59 1369 aa20.05■□□□□ 0.8
SCN8A-215ENST00000638820 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
SCN8A-215ENST00000638820 CARMIL2Q6F5E8 1435 aa20.02■□□□□ 0.8
SCN8A-215ENST00000638820 HRCP23327 699 aa20■□□□□ 0.79
SCN8A-215ENST00000638820 CDK11AQ9UQ88 783 aaPredicted RBP19.96■□□□□ 0.79
SCN8A-215ENST00000638820 CASKIN1Q8WXD9 1431 aa19.96■□□□□ 0.79
SCN8A-215ENST00000638820 PCF11O94913 1555 aaKnown RBP19.94■□□□□ 0.78
SCN8A-215ENST00000638820 FYCO1Q9BQS8 1478 aa19.92■□□□□ 0.78
SCN8A-215ENST00000638820 CEP170Q5SW79 1584 aa19.89■□□□□ 0.77
SCN8A-215ENST00000638820 NUP160Q12769 1436 aa19.89■□□□□ 0.77
SCN8A-215ENST00000638820 PRG4Q92954 1404 aaPredicted RBP19.88■□□□□ 0.77
SCN8A-215ENST00000638820 TIAM1Q13009 1591 aa19.87■□□□□ 0.77
SCN8A-215ENST00000638820 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
SCN8A-215ENST00000638820 UGGT2Q9NYU1 1516 aa19.86■□□□□ 0.77
SCN8A-215ENST00000638820 CCNB3Q8WWL7 1395 aa19.85■□□□□ 0.77
SCN8A-215ENST00000638820 SAMD9Q5K651 1589 aa19.85■□□□□ 0.77
SCN8A-215ENST00000638820 PTPRGP23470 1445 aa19.84■□□□□ 0.77
SCN8A-215ENST00000638820 ZEB1P37275 1124 aaPredicted RBP19.83■□□□□ 0.77
SCN8A-215ENST00000638820 OSCARQ8IYS5 282 aa19.82■□□□□ 0.76
SCN8A-215ENST00000638820 PLEKHD1A6NEE1 506 aa19.81■□□□□ 0.76
SCN8A-215ENST00000638820 DISP1Q96F81 1524 aa19.81■□□□□ 0.76
SCN8A-215ENST00000638820 KIAA0556O60303 1618 aa19.79■□□□□ 0.76
SCN8A-215ENST00000638820 CHD1O14646 1710 aa19.78■□□□□ 0.76
SCN8A-215ENST00000638820 ZNF777Q9ULD5 760 aaPredicted RBP19.78■□□□□ 0.76
SCN8A-215ENST00000638820 PHLDB1Q86UU1 1377 aa19.77■□□□□ 0.76
SCN8A-215ENST00000638820 PLB1Q6P1J6 1458 aa19.77■□□□□ 0.75
SCN8A-215ENST00000638820 CCDC18Q5T9S5 1454 aa19.75■□□□□ 0.75
SCN8A-215ENST00000638820 MAP3K1Q13233 1512 aa19.75■□□□□ 0.75
SCN8A-215ENST00000638820 CDK13Q14004 1512 aaKnown RBP19.75■□□□□ 0.75
SCN8A-215ENST00000638820 HECW1Q76N89 1606 aa19.74■□□□□ 0.75
SCN8A-215ENST00000638820 EPRSP07814 1512 aaKnown RBP19.74■□□□□ 0.75
SCN8A-215ENST00000638820 KCNH8Q96L42 1107 aa19.72■□□□□ 0.75
SCN8A-215ENST00000638820 CHIC2Q9UKJ5 165 aa19.69■□□□□ 0.74
SCN8A-215ENST00000638820 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
SCN8A-215ENST00000638820 CFDP1Q9UEE9 299 aaPredicted RBP19.66■□□□□ 0.74
SCN8A-215ENST00000638820 RRBP1Q9P2E9 1410 aaKnown RBP19.66■□□□□ 0.74
SCN8A-215ENST00000638820 CFAP43Q8NDM7 1665 aa19.65■□□□□ 0.74
SCN8A-215ENST00000638820 NUP153P49790 1475 aaKnown RBP19.64■□□□□ 0.73
SCN8A-215ENST00000638820 RAPGEF6Q8TEU7 1601 aa19.64■□□□□ 0.73
SCN8A-215ENST00000638820 NPM1P06748 294 aaKnown RBP eCLIP19.64■□□□□ 0.73
SCN8A-215ENST00000638820 EHBP1L1Q8N3D4 1523 aa19.63■□□□□ 0.73
SCN8A-215ENST00000638820 FGD6Q6ZV73 1430 aa19.61■□□□□ 0.73
SCN8A-215ENST00000638820 MYOM3Q5VTT5 1437 aa19.6■□□□□ 0.73
SCN8A-215ENST00000638820 UACAQ9BZF9 1416 aa19.59■□□□□ 0.73
SCN8A-215ENST00000638820 RRP7BPQ9NSQ0 103 aa19.58■□□□□ 0.73
SCN8A-215ENST00000638820 SUPT6HQ7KZ85 1726 aaKnown RBP19.58■□□□□ 0.72
SCN8A-215ENST00000638820 TROQ12816 1431 aaPredicted RBP19.56■□□□□ 0.72
SCN8A-215ENST00000638820 TRIM52Q96A61 297 aa19.54■□□□□ 0.72
SCN8A-215ENST00000638820 ERCC6L2Q5T890 1561 aa19.53■□□□□ 0.72
SCN8A-215ENST00000638820 ZNF644Q9H582 1327 aaPredicted RBP19.52■□□□□ 0.72
SCN8A-215ENST00000638820 MAGI3Q5TCQ9 1506 aa19.52■□□□□ 0.72
SCN8A-215ENST00000638820 ATP10BO94823 1461 aa19.52■□□□□ 0.72
SCN8A-215ENST00000638820 MYT1LQ9UL68 1186 aa19.5■□□□□ 0.71
SCN8A-215ENST00000638820 RAB3GAP2Q9H2M9 1393 aa19.49■□□□□ 0.71
SCN8A-215ENST00000638820 LRRIQ1Q96JM4 1722 aa19.48■□□□□ 0.71
SCN8A-215ENST00000638820 CYB5RLQ6IPT4 315 aa19.48■□□□□ 0.71
SCN8A-215ENST00000638820 SETD5Q9C0A6 1442 aa19.48■□□□□ 0.71
SCN8A-215ENST00000638820 TSPY4P0CV99 314 aa19.47■□□□□ 0.71
SCN8A-215ENST00000638820 TSPY10P0CW01 314 aa19.47■□□□□ 0.71
SCN8A-215ENST00000638820 CLASP1Q7Z460 1538 aa19.45■□□□□ 0.7
SCN8A-215ENST00000638820 ABCA8O94911 1581 aa19.44■□□□□ 0.7
SCN8A-215ENST00000638820 NEUROD1Q13562 356 aa19.43■□□□□ 0.7
SCN8A-215ENST00000638820 MIA2Q96PC5 1412 aa19.41■□□□□ 0.7
SCN8A-215ENST00000638820 HNRNPMP52272 730 aaKnown RBP eCLIP19.4■□□□□ 0.7
SCN8A-215ENST00000638820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.4■□□□□ 0.7
SCN8A-215ENST00000638820 ARHGEF11O15085 1522 aa19.4■□□□□ 0.7
SCN8A-215ENST00000638820 SHROOM2Q13796 1616 aa19.39■□□□□ 0.7
SCN8A-215ENST00000638820 PTPN23Q9H3S7 1636 aa19.39■□□□□ 0.69
SCN8A-215ENST00000638820 ABCC2Q92887 1545 aa19.38■□□□□ 0.69
SCN8A-215ENST00000638820 KIF14Q15058 1648 aa19.36■□□□□ 0.69
SCN8A-215ENST00000638820 DHX57Q6P158 1386 aaKnown RBP19.35■□□□□ 0.69
SCN8A-215ENST00000638820 EFCAB2Q5VUJ9 269 aa19.34■□□□□ 0.69
SCN8A-215ENST00000638820 GPATCH8Q9UKJ3 1502 aaKnown RBP19.33■□□□□ 0.69
SCN8A-215ENST00000638820 PTPRKQ15262 1439 aa19.31■□□□□ 0.68
SCN8A-215ENST00000638820 ARHGAP5Q13017 1502 aa19.28■□□□□ 0.68
SCN8A-215ENST00000638820 CAMSAP2Q08AD1 1489 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms