RNA–Protein interactions for RNA: ENST00000638301.1

HNRNPU-213, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 3,650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-213ENST00000638301 ITGAEP38570 1179 aa9.74□□□□□ -0.85
HNRNPU-213ENST00000638301 FANCD2Q9BXW9 1451 aa9.73□□□□□ -0.85
HNRNPU-213ENST00000638301 PHLDB1Q86UU1 1377 aa9.73□□□□□ -0.85
HNRNPU-213ENST00000638301 CFAP43Q8NDM7 1665 aa9.72□□□□□ -0.85
HNRNPU-213ENST00000638301 PCF11O94913 1555 aaKnown RBP9.71□□□□□ -0.85
HNRNPU-213ENST00000638301 FHAD1B1AJZ9 1412 aa9.71□□□□□ -0.86
HNRNPU-213ENST00000638301 DNMBPQ6XZF7 1577 aa9.7□□□□□ -0.86
HNRNPU-213ENST00000638301 SETD5Q9C0A6 1442 aa9.7□□□□□ -0.86
HNRNPU-213ENST00000638301 ABCA10Q8WWZ4 1543 aa9.7□□□□□ -0.86
HNRNPU-213ENST00000638301 RAD54L2Q9Y4B4 1467 aa9.7□□□□□ -0.86
HNRNPU-213ENST00000638301 POLA1P09884 1462 aaPredicted RBP9.68□□□□□ -0.86
HNRNPU-213ENST00000638301 TOPBP1Q92547 1522 aa9.68□□□□□ -0.86
HNRNPU-213ENST00000638301 P3H3Q8IVL6 736 aa9.68□□□□□ -0.86
HNRNPU-213ENST00000638301 FHOD3Q2V2M9 1422 aa9.67□□□□□ -0.86
HNRNPU-213ENST00000638301 FYCO1Q9BQS8 1478 aa9.66□□□□□ -0.86
HNRNPU-213ENST00000638301 EFCAB5A4FU69 1503 aa9.66□□□□□ -0.86
HNRNPU-213ENST00000638301 NESP48681 1621 aa9.65□□□□□ -0.86
HNRNPU-213ENST00000638301 CUL7Q14999 1698 aa9.65□□□□□ -0.86
HNRNPU-213ENST00000638301 CASKIN1Q8WXD9 1431 aa9.65□□□□□ -0.86
HNRNPU-213ENST00000638301 AQRO60306 1485 aaKnown RBP eCLIP9.65□□□□□ -0.861e-7■■■■□ 25.3
HNRNPU-213ENST00000638301 CTTNBP2Q8WZ74 1663 aa9.65□□□□□ -0.86
HNRNPU-213ENST00000638301 FAM50AQ14320 339 aaKnown RBP9.64□□□□□ -0.87
HNRNPU-213ENST00000638301 WDR97A6NE52 1622 aa9.64□□□□□ -0.87
HNRNPU-213ENST00000638301 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.63□□□□□ -0.87
HNRNPU-213ENST00000638301 SIN3AQ96ST3 1273 aa9.63□□□□□ -0.87
HNRNPU-213ENST00000638301 ATP1B4Q9UN42 357 aaPredicted RBP9.62□□□□□ -0.87
HNRNPU-213ENST00000638301 SNAPC4Q5SXM2 1469 aa9.61□□□□□ -0.87
HNRNPU-213ENST00000638301 URB2Q14146 1524 aaKnown RBP9.6□□□□□ -0.87
HNRNPU-213ENST00000638301 LRRIQ1Q96JM4 1722 aa9.59□□□□□ -0.87
HNRNPU-213ENST00000638301 KCNH8Q96L42 1107 aa9.59□□□□□ -0.87
HNRNPU-213ENST00000638301 SUPT16HQ9Y5B9 1047 aaKnown RBP9.59□□□□□ -0.87
HNRNPU-213ENST00000638301 FMN1Q68DA7 1419 aa9.59□□□□□ -0.87
HNRNPU-213ENST00000638301 TIMELESSQ9UNS1 1208 aa9.59□□□□□ -0.87
HNRNPU-213ENST00000638301 ABCA5Q8WWZ7 1642 aa9.58□□□□□ -0.88
HNRNPU-213ENST00000638301 SAMD9Q5K651 1589 aa9.58□□□□□ -0.88
HNRNPU-213ENST00000638301 FGD6Q6ZV73 1430 aa9.58□□□□□ -0.88
HNRNPU-213ENST00000638301 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
HNRNPU-213ENST00000638301 PTPRKQ15262 1439 aa9.56□□□□□ -0.88
HNRNPU-213ENST00000638301 PPP1R15AO75807 674 aaPredicted RBP9.56□□□□□ -0.88
HNRNPU-213ENST00000638301 TDRD9Q8NDG6 1382 aaKnown RBP9.55□□□□□ -0.88
HNRNPU-213ENST00000638301 GRIN2BQ13224 1484 aa9.55□□□□□ -0.88
HNRNPU-213ENST00000638301 DDX10Q13206 875 aaKnown RBP9.55□□□□□ -0.88
HNRNPU-213ENST00000638301 GAPVD1Q14C86 1478 aa9.54□□□□□ -0.88
HNRNPU-213ENST00000638301 HFM1A2PYH4 1435 aa9.54□□□□□ -0.88
HNRNPU-213ENST00000638301 MTUS2Q5JR59 1369 aa9.54□□□□□ -0.88
HNRNPU-213ENST00000638301 CCDC18Q5T9S5 1454 aa9.53□□□□□ -0.88
HNRNPU-213ENST00000638301 PTPN23Q9H3S7 1636 aa9.53□□□□□ -0.88
HNRNPU-213ENST00000638301 NCOA2Q15596 1464 aa9.52□□□□□ -0.88
HNRNPU-213ENST00000638301 THOC2Q8NI27 1593 aaKnown RBP9.52□□□□□ -0.89
HNRNPU-213ENST00000638301 UACAQ9BZF9 1416 aa9.52□□□□□ -0.89
HNRNPU-213ENST00000638301 MYOM3Q5VTT5 1437 aa9.51□□□□□ -0.89
HNRNPU-213ENST00000638301 HIRIP3Q9BW71 556 aaPredicted RBP9.51□□□□□ -0.89
HNRNPU-213ENST00000638301 NAIPQ13075 1403 aa9.51□□□□□ -0.89
HNRNPU-213ENST00000638301 SUPT6HQ7KZ85 1726 aaKnown RBP9.51□□□□□ -0.89
HNRNPU-213ENST00000638301 ARHGEF11O15085 1522 aa9.5□□□□□ -0.89
HNRNPU-213ENST00000638301 TARBP1Q13395 1621 aaKnown RBP9.5□□□□□ -0.89
HNRNPU-213ENST00000638301 MAGI3Q5TCQ9 1506 aa9.5□□□□□ -0.89
HNRNPU-213ENST00000638301 KIF21AQ7Z4S6 1674 aa9.5□□□□□ -0.89
HNRNPU-213ENST00000638301 EHBP1L1Q8N3D4 1523 aa9.49□□□□□ -0.89
HNRNPU-213ENST00000638301 PDS5BQ9NTI5 1447 aa9.49□□□□□ -0.89
HNRNPU-213ENST00000638301 UGGT2Q9NYU1 1516 aa9.49□□□□□ -0.89
HNRNPU-213ENST00000638301 KDM5BQ9UGL1 1544 aa9.48□□□□□ -0.89
HNRNPU-213ENST00000638301 TONSLQ96HA7 1378 aa9.48□□□□□ -0.89
HNRNPU-213ENST00000638301 CCER2I3L3R5 266 aa9.46□□□□□ -0.89
HNRNPU-213ENST00000638301 MYT1Q01538 1121 aa9.46□□□□□ -0.9
HNRNPU-213ENST00000638301 TCOF1Q13428 1488 aaKnown RBP9.46□□□□□ -0.9
HNRNPU-213ENST00000638301 PBRM1Q86U86 1689 aa9.45□□□□□ -0.9
HNRNPU-213ENST00000638301 DENND4BO75064 1496 aaPredicted RBP9.45□□□□□ -0.9
HNRNPU-213ENST00000638301 GCC2Q8IWJ2 1684 aa9.44□□□□□ -0.9
HNRNPU-213ENST00000638301 TSHZ2Q9NRE2 1034 aa9.44□□□□□ -0.9
HNRNPU-213ENST00000638301 ANP32CO43423 234 aa9.43□□□□□ -0.9
HNRNPU-213ENST00000638301 HECW1Q76N89 1606 aa9.43□□□□□ -0.9
HNRNPU-213ENST00000638301 KDM6BO15054 1643 aa9.43□□□□□ -0.9
HNRNPU-213ENST00000638301 IQGAP2Q13576 1575 aa9.43□□□□□ -0.9
HNRNPU-213ENST00000638301 EPRSP07814 1512 aaKnown RBP9.42□□□□□ -0.9
HNRNPU-213ENST00000638301 ADAMTS12P58397 1594 aa9.42□□□□□ -0.9
HNRNPU-213ENST00000638301 RRP7BPQ9NSQ0 103 aa9.42□□□□□ -0.9
HNRNPU-213ENST00000638301 AKNAQ7Z591 1439 aa9.41□□□□□ -0.9
HNRNPU-213ENST00000638301 CDK13Q14004 1512 aaKnown RBP9.4□□□□□ -0.9
HNRNPU-213ENST00000638301 CHIC2Q9UKJ5 165 aa9.4□□□□□ -0.9
HNRNPU-213ENST00000638301 WDR62O43379 1518 aa9.4□□□□□ -0.9
HNRNPU-213ENST00000638301 FKBP8Q14318 412 aa9.4□□□□□ -0.9
HNRNPU-213ENST00000638301 TRIM52Q96A61 297 aa9.4□□□□□ -0.91
HNRNPU-213ENST00000638301 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
HNRNPU-213ENST00000638301 BCANQ96GW7 911 aa9.38□□□□□ -0.91
HNRNPU-213ENST00000638301 WASHC2AQ641Q2 1341 aa9.36□□□□□ -0.91
HNRNPU-213ENST00000638301 MPHOSPH9Q99550 1183 aa9.36□□□□□ -0.91
HNRNPU-213ENST00000638301 HSPA5P11021 654 aaKnown RBP9.36□□□□□ -0.91
HNRNPU-213ENST00000638301 MRC2Q9UBG0 1479 aa9.36□□□□□ -0.91
HNRNPU-213ENST00000638301 ARID3CA6NKF2 412 aa9.34□□□□□ -0.91
HNRNPU-213ENST00000638301 DISP1Q96F81 1524 aa9.34□□□□□ -0.91
HNRNPU-213ENST00000638301 ZNF608Q9ULD9 1512 aaPredicted RBP9.34□□□□□ -0.91
HNRNPU-213ENST00000638301 DAPK1P53355 1430 aa9.33□□□□□ -0.92
HNRNPU-213ENST00000638301 ROCK1Q13464 1354 aa9.33□□□□□ -0.92
HNRNPU-213ENST00000638301 KIAA0556O60303 1618 aa9.33□□□□□ -0.92
HNRNPU-213ENST00000638301 FOXD1Q16676 465 aa9.33□□□□□ -0.92
HNRNPU-213ENST00000638301 L3MBTL2Q969R5 705 aa9.33□□□□□ -0.92
HNRNPU-213ENST00000638301 DNMT1P26358 1616 aaKnown RBP9.33□□□□□ -0.92
HNRNPU-213ENST00000638301 ABCC5O15440 1437 aa9.32□□□□□ -0.92
HNRNPU-213ENST00000638301 NUP153P49790 1475 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms