RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
LINC00598-216ENST00000638163 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
LINC00598-216ENST00000638163 KIAA0586Q9BVV6 1533 aa16.35■□□□□ 0.21
LINC00598-216ENST00000638163 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
LINC00598-216ENST00000638163 NUP160Q12769 1436 aa16.32■□□□□ 0.2
LINC00598-216ENST00000638163 IQGAP2Q13576 1575 aa16.32■□□□□ 0.2
LINC00598-216ENST00000638163 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
LINC00598-216ENST00000638163 UGGT2Q9NYU1 1516 aa16.27■□□□□ 0.2
LINC00598-216ENST00000638163 ARHGAP35Q9NRY4 1499 aa16.25■□□□□ 0.19
LINC00598-216ENST00000638163 FBLN2P98095 1184 aa16.25■□□□□ 0.19
LINC00598-216ENST00000638163 SAMD9Q5K651 1589 aa16.24■□□□□ 0.19
LINC00598-216ENST00000638163 FMN1Q68DA7 1419 aa16.22■□□□□ 0.19
LINC00598-216ENST00000638163 CEP170Q5SW79 1584 aa16.21■□□□□ 0.19
LINC00598-216ENST00000638163 CHD1O14646 1710 aa16.21■□□□□ 0.19
LINC00598-216ENST00000638163 ARAP1Q96P48 1450 aa16.2■□□□□ 0.18
LINC00598-216ENST00000638163 CARMIL2Q6F5E8 1435 aa16.19■□□□□ 0.18
LINC00598-216ENST00000638163 APLP2Q06481 763 aa16.15■□□□□ 0.18
LINC00598-216ENST00000638163 FYCO1Q9BQS8 1478 aa16.13■□□□□ 0.17
LINC00598-216ENST00000638163 MAP3K1Q13233 1512 aa16.13■□□□□ 0.17
LINC00598-216ENST00000638163 KIAA0556O60303 1618 aa16.12■□□□□ 0.17
LINC00598-216ENST00000638163 SHROOM2Q13796 1616 aa16.11■□□□□ 0.17
LINC00598-216ENST00000638163 CASKIN1Q8WXD9 1431 aa16.11■□□□□ 0.17
LINC00598-216ENST00000638163 CLASP1Q7Z460 1538 aa16.1■□□□□ 0.17
LINC00598-216ENST00000638163 RANGAP1P46060 587 aaPredicted RBP16.1■□□□□ 0.17
LINC00598-216ENST00000638163 JPH4Q96JJ6 628 aa16.1■□□□□ 0.17
LINC00598-216ENST00000638163 DISP1Q96F81 1524 aa16.09■□□□□ 0.17
LINC00598-216ENST00000638163 FHOD3Q2V2M9 1422 aa16.09■□□□□ 0.17
LINC00598-216ENST00000638163 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
LINC00598-216ENST00000638163 HECW1Q76N89 1606 aa16.03■□□□□ 0.16
LINC00598-216ENST00000638163 PRG4Q92954 1404 aaPredicted RBP16.02■□□□□ 0.16
LINC00598-216ENST00000638163 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.16
LINC00598-216ENST00000638163 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
LINC00598-216ENST00000638163 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
LINC00598-216ENST00000638163 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
LINC00598-216ENST00000638163 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
LINC00598-216ENST00000638163 TIAM1Q13009 1591 aa15.98■□□□□ 0.15
LINC00598-216ENST00000638163 P3H3Q8IVL6 736 aa15.98■□□□□ 0.15
LINC00598-216ENST00000638163 CFAP43Q8NDM7 1665 aa15.97■□□□□ 0.15
LINC00598-216ENST00000638163 PTPRGP23470 1445 aa15.95■□□□□ 0.14
LINC00598-216ENST00000638163 RAPGEF6Q8TEU7 1601 aa15.95■□□□□ 0.14
LINC00598-216ENST00000638163 TRIM26Q12899 539 aaPredicted RBP15.93■□□□□ 0.14
LINC00598-216ENST00000638163 CDK11AQ9UQ88 783 aaPredicted RBP15.92■□□□□ 0.14
LINC00598-216ENST00000638163 CYB5RLQ6IPT4 315 aa15.91■□□□□ 0.14
LINC00598-216ENST00000638163 ABCA8O94911 1581 aa15.91■□□□□ 0.14
LINC00598-216ENST00000638163 LRRC9Q6ZRR7 1453 aa15.91■□□□□ 0.14
LINC00598-216ENST00000638163 EPRSP07814 1512 aaKnown RBP15.9■□□□□ 0.14
LINC00598-216ENST00000638163 EHBP1L1Q8N3D4 1523 aa15.89■□□□□ 0.13
LINC00598-216ENST00000638163 UHRF1BP1LA0JNW5 1464 aa15.88■□□□□ 0.13
LINC00598-216ENST00000638163 UACAQ9BZF9 1416 aa15.87■□□□□ 0.13
LINC00598-216ENST00000638163 NUP153P49790 1475 aaKnown RBP15.87■□□□□ 0.13
LINC00598-216ENST00000638163 ATP1B4Q9UN42 357 aaPredicted RBP15.86■□□□□ 0.13
LINC00598-216ENST00000638163 MTUS2Q5JR59 1369 aa15.86■□□□□ 0.13
LINC00598-216ENST00000638163 ABCC2Q92887 1545 aa15.85■□□□□ 0.13
LINC00598-216ENST00000638163 PLB1Q6P1J6 1458 aa15.84■□□□□ 0.13
LINC00598-216ENST00000638163 ERCC6L2Q5T890 1561 aa15.82■□□□□ 0.12
LINC00598-216ENST00000638163 SUPT6HQ7KZ85 1726 aaKnown RBP15.79■□□□□ 0.12
LINC00598-216ENST00000638163 KANK4Q5T7N3 995 aaPredicted RBP15.78■□□□□ 0.12
LINC00598-216ENST00000638163 TROQ12816 1431 aaPredicted RBP15.77■□□□□ 0.12
LINC00598-216ENST00000638163 LRRIQ1Q96JM4 1722 aa15.77■□□□□ 0.11
LINC00598-216ENST00000638163 RRBP1Q9P2E9 1410 aaKnown RBP15.77■□□□□ 0.11
LINC00598-216ENST00000638163 CDK13Q14004 1512 aaKnown RBP15.76■□□□□ 0.11
LINC00598-216ENST00000638163 KDM5BQ9UGL1 1544 aa15.76■□□□□ 0.11
LINC00598-216ENST00000638163 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.11
LINC00598-216ENST00000638163 ATP10BO94823 1461 aa15.75■□□□□ 0.11
LINC00598-216ENST00000638163 PLEKHD1A6NEE1 506 aa15.74■□□□□ 0.11
LINC00598-216ENST00000638163 ADCY10Q96PN6 1610 aa15.73■□□□□ 0.11
LINC00598-216ENST00000638163 NCOA2Q15596 1464 aa15.72■□□□□ 0.11
LINC00598-216ENST00000638163 TTBK1Q5TCY1 1321 aaPredicted RBP15.72■□□□□ 0.11
LINC00598-216ENST00000638163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
LINC00598-216ENST00000638163 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
LINC00598-216ENST00000638163 MIA2Q96PC5 1412 aa15.71■□□□□ 0.11
LINC00598-216ENST00000638163 KIF14Q15058 1648 aa15.71■□□□□ 0.11
LINC00598-216ENST00000638163 MYOM3Q5VTT5 1437 aa15.7■□□□□ 0.1
LINC00598-216ENST00000638163 CCNB3Q8WWL7 1395 aa15.7■□□□□ 0.1
LINC00598-216ENST00000638163 PPARGC1BQ86YN6 1023 aaKnown RBP15.69■□□□□ 0.1
LINC00598-216ENST00000638163 MAGI3Q5TCQ9 1506 aa15.68■□□□□ 0.1
LINC00598-216ENST00000638163 PCGF6Q9BYE7 350 aa15.68■□□□□ 0.1
LINC00598-216ENST00000638163 PHLDB1Q86UU1 1377 aa15.66■□□□□ 0.1
LINC00598-216ENST00000638163 NPM1P06748 294 aaKnown RBP eCLIP15.66■□□□□ 0.1
LINC00598-216ENST00000638163 FGD6Q6ZV73 1430 aa15.66■□□□□ 0.1
LINC00598-216ENST00000638163 ITSN2Q9NZM3 1697 aa15.66■□□□□ 0.1
LINC00598-216ENST00000638163 ZCCHC11Q5TAX3 1644 aaKnown RBP15.65■□□□□ 0.1
LINC00598-216ENST00000638163 TCOF1Q13428 1488 aaKnown RBP15.61■□□□□ 0.09
LINC00598-216ENST00000638163 WDR7Q9Y4E6 1490 aa15.61■□□□□ 0.09
LINC00598-216ENST00000638163 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
LINC00598-216ENST00000638163 ABCC10Q5T3U5 1492 aa15.59■□□□□ 0.09
LINC00598-216ENST00000638163 ARAP3Q8WWN8 1544 aa15.58■□□□□ 0.09
LINC00598-216ENST00000638163 ARID3CA6NKF2 412 aa15.58■□□□□ 0.08
LINC00598-216ENST00000638163 ACIN1Q9UKV3 1341 aaKnown RBP15.57■□□□□ 0.08
LINC00598-216ENST00000638163 MAPKBP1O60336 1514 aa15.57■□□□□ 0.08
LINC00598-216ENST00000638163 GPATCH8Q9UKJ3 1502 aaKnown RBP15.56■□□□□ 0.08
LINC00598-216ENST00000638163 PTPN23Q9H3S7 1636 aa15.56■□□□□ 0.08
LINC00598-216ENST00000638163 PLEKHH2Q8IVE3 1493 aa15.54■□□□□ 0.08
LINC00598-216ENST00000638163 ASXL2Q76L83 1435 aa15.53■□□□□ 0.08
LINC00598-216ENST00000638163 CFDP1Q9UEE9 299 aaPredicted RBP15.53■□□□□ 0.08
LINC00598-216ENST00000638163 FAM50AQ14320 339 aaKnown RBP15.52■□□□□ 0.08
LINC00598-216ENST00000638163 RSPH4AQ5TD94 716 aa15.52■□□□□ 0.08
LINC00598-216ENST00000638163 PREX2Q70Z35 1606 aa15.52■□□□□ 0.08
LINC00598-216ENST00000638163 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.52■□□□□ 0.07
LINC00598-216ENST00000638163 AKNAQ7Z591 1439 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms