RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 FHOD3Q2V2M9 1422 aa11.96□□□□□ -0.5
GABRB3-225ENST00000638099 PELP1Q8IZL8 1130 aaKnown RBP11.96□□□□□ -0.5
GABRB3-225ENST00000638099 WDR97A6NE52 1622 aa11.95□□□□□ -0.5
GABRB3-225ENST00000638099 ABCA5Q8WWZ7 1642 aa11.91□□□□□ -0.5
GABRB3-225ENST00000638099 TARBP1Q13395 1621 aaKnown RBP11.91□□□□□ -0.5
GABRB3-225ENST00000638099 MRC2Q9UBG0 1479 aa11.91□□□□□ -0.5
GABRB3-225ENST00000638099 ZNF608Q9ULD9 1512 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-225ENST00000638099 MYT1Q01538 1121 aa11.9□□□□□ -0.5
GABRB3-225ENST00000638099 ERCC6Q03468 1493 aa11.9□□□□□ -0.5
GABRB3-225ENST00000638099 CUL7Q14999 1698 aa11.89□□□□□ -0.51
GABRB3-225ENST00000638099 ARID3CA6NKF2 412 aa11.87□□□□□ -0.51
GABRB3-225ENST00000638099 PCF11O94913 1555 aaKnown RBP11.87□□□□□ -0.51
GABRB3-225ENST00000638099 CTTNBP2Q8WZ74 1663 aa11.86□□□□□ -0.51
GABRB3-225ENST00000638099 PHF23Q9BUL5 403 aaPredicted RBP11.85□□□□□ -0.51
GABRB3-225ENST00000638099 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
GABRB3-225ENST00000638099 TIAM1Q13009 1591 aa11.83□□□□□ -0.52
GABRB3-225ENST00000638099 FBLN2P98095 1184 aa11.83□□□□□ -0.52
GABRB3-225ENST00000638099 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
GABRB3-225ENST00000638099 PHLDB1Q86UU1 1377 aa11.81□□□□□ -0.52
GABRB3-225ENST00000638099 FHAD1B1AJZ9 1412 aa11.81□□□□□ -0.52
GABRB3-225ENST00000638099 CCNB3Q8WWL7 1395 aa11.8□□□□□ -0.52
GABRB3-225ENST00000638099 LRRC9Q6ZRR7 1453 aa11.8□□□□□ -0.52
GABRB3-225ENST00000638099 WDR62O43379 1518 aa11.79□□□□□ -0.52
GABRB3-225ENST00000638099 RRBP1Q9P2E9 1410 aaKnown RBP11.78□□□□□ -0.52
GABRB3-225ENST00000638099 GRIN2BQ13224 1484 aa11.78□□□□□ -0.52
GABRB3-225ENST00000638099 IFT140Q96RY7 1462 aa11.77□□□□□ -0.53
GABRB3-225ENST00000638099 EFCAB5A4FU69 1503 aa11.77□□□□□ -0.53
GABRB3-225ENST00000638099 ADAMTS12P58397 1594 aa11.76□□□□□ -0.53
GABRB3-225ENST00000638099 SNAPC4Q5SXM2 1469 aa11.76□□□□□ -0.53
GABRB3-225ENST00000638099 CASKIN1Q8WXD9 1431 aa11.75□□□□□ -0.53
GABRB3-225ENST00000638099 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
GABRB3-225ENST00000638099 THOC2Q8NI27 1593 aaKnown RBP11.74□□□□□ -0.53
GABRB3-225ENST00000638099 FMN1Q68DA7 1419 aa11.74□□□□□ -0.53
GABRB3-225ENST00000638099 FYCO1Q9BQS8 1478 aa11.74□□□□□ -0.53
GABRB3-225ENST00000638099 CFAP43Q8NDM7 1665 aa11.73□□□□□ -0.53
GABRB3-225ENST00000638099 LRRIQ1Q96JM4 1722 aa11.73□□□□□ -0.53
GABRB3-225ENST00000638099 SAMD9Q5K651 1589 aa11.73□□□□□ -0.53
GABRB3-225ENST00000638099 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
GABRB3-225ENST00000638099 MTUS2Q5JR59 1369 aa11.72□□□□□ -0.53
GABRB3-225ENST00000638099 IQGAP2Q13576 1575 aa11.71□□□□□ -0.53
GABRB3-225ENST00000638099 DHX57Q6P158 1386 aaKnown RBP11.71□□□□□ -0.54
GABRB3-225ENST00000638099 MAP3K1Q13233 1512 aa11.7□□□□□ -0.54
GABRB3-225ENST00000638099 RAB3GAP2Q9H2M9 1393 aa11.68□□□□□ -0.54
GABRB3-225ENST00000638099 GRIN2AQ12879 1464 aa11.67□□□□□ -0.54
GABRB3-225ENST00000638099 CDK13Q14004 1512 aaKnown RBP11.67□□□□□ -0.54
GABRB3-225ENST00000638099 MAGI3Q5TCQ9 1506 aa11.65□□□□□ -0.54
GABRB3-225ENST00000638099 DIEXFQ68CQ4 756 aaKnown RBP11.65□□□□□ -0.54
GABRB3-225ENST00000638099 CHIC2Q9UKJ5 165 aa11.63□□□□□ -0.55
GABRB3-225ENST00000638099 NCOA2Q15596 1464 aa11.63□□□□□ -0.55
GABRB3-225ENST00000638099 CEP170Q5SW79 1584 aa11.62□□□□□ -0.55
GABRB3-225ENST00000638099 FGD6Q6ZV73 1430 aa11.62□□□□□ -0.55
GABRB3-225ENST00000638099 DISP1Q96F81 1524 aa11.62□□□□□ -0.55
GABRB3-225ENST00000638099 KIAA0586Q9BVV6 1533 aa11.62□□□□□ -0.55
GABRB3-225ENST00000638099 ZNF316A6NFI3 1004 aaPredicted RBP11.62□□□□□ -0.55
GABRB3-225ENST00000638099 SETD5Q9C0A6 1442 aa11.61□□□□□ -0.55
GABRB3-225ENST00000638099 NEUROD1Q13562 356 aa11.61□□□□□ -0.55
GABRB3-225ENST00000638099 EPRSP07814 1512 aaKnown RBP11.6□□□□□ -0.55
GABRB3-225ENST00000638099 SIN3AQ96ST3 1273 aa11.6□□□□□ -0.55
GABRB3-225ENST00000638099 SYNJ2O15056 1496 aa11.6□□□□□ -0.55
GABRB3-225ENST00000638099 PTPRKQ15262 1439 aa11.6□□□□□ -0.55
GABRB3-225ENST00000638099 JPH4Q96JJ6 628 aa11.6□□□□□ -0.55
GABRB3-225ENST00000638099 KIAA0556O60303 1618 aa11.59□□□□□ -0.55
GABRB3-225ENST00000638099 UGGT2Q9NYU1 1516 aa11.59□□□□□ -0.55
GABRB3-225ENST00000638099 MAGI1Q96QZ7 1491 aaPredicted RBP11.59□□□□□ -0.55
GABRB3-225ENST00000638099 HECW1Q76N89 1606 aa11.58□□□□□ -0.56
GABRB3-225ENST00000638099 RRP7BPQ9NSQ0 103 aa11.58□□□□□ -0.56
GABRB3-225ENST00000638099 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
GABRB3-225ENST00000638099 MYOM3Q5VTT5 1437 aa11.57□□□□□ -0.56
GABRB3-225ENST00000638099 SUPT6HQ7KZ85 1726 aaKnown RBP11.57□□□□□ -0.56
GABRB3-225ENST00000638099 EHBP1L1Q8N3D4 1523 aa11.56□□□□□ -0.56
GABRB3-225ENST00000638099 ZNF644Q9H582 1327 aaPredicted RBP11.55□□□□□ -0.56
GABRB3-225ENST00000638099 MAPKBP1O60336 1514 aa11.55□□□□□ -0.56
GABRB3-225ENST00000638099 NUP153P49790 1475 aaKnown RBP11.55□□□□□ -0.56
GABRB3-225ENST00000638099 CCDC18Q5T9S5 1454 aa11.54□□□□□ -0.56
GABRB3-225ENST00000638099 PTPN23Q9H3S7 1636 aa11.53□□□□□ -0.56
GABRB3-225ENST00000638099 PRG4Q92954 1404 aaPredicted RBP11.52□□□□□ -0.56
GABRB3-225ENST00000638099 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.57
GABRB3-225ENST00000638099 RAPGEF6Q8TEU7 1601 aa11.51□□□□□ -0.57
GABRB3-225ENST00000638099 NUP160Q12769 1436 aa11.51□□□□□ -0.57
GABRB3-225ENST00000638099 CLSPNQ9HAW4 1339 aa11.51□□□□□ -0.57
GABRB3-225ENST00000638099 MIER1Q8N108 512 aa11.49□□□□□ -0.57
GABRB3-225ENST00000638099 ARHGEF11O15085 1522 aa11.49□□□□□ -0.57
GABRB3-225ENST00000638099 CARMIL2Q6F5E8 1435 aa11.48□□□□□ -0.57
GABRB3-225ENST00000638099 CHD1O14646 1710 aa11.48□□□□□ -0.57
GABRB3-225ENST00000638099 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
GABRB3-225ENST00000638099 YTHDC1Q96MU7 727 aaKnown RBP11.48□□□□□ -0.57
GABRB3-225ENST00000638099 HIRIP3Q9BW71 556 aaPredicted RBP11.48□□□□□ -0.57
GABRB3-225ENST00000638099 NAIPQ13075 1403 aa11.47□□□□□ -0.57
GABRB3-225ENST00000638099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.47□□□□□ -0.57
GABRB3-225ENST00000638099 FOXD1Q16676 465 aa11.46□□□□□ -0.58
GABRB3-225ENST00000638099 CDK11AQ9UQ88 783 aaPredicted RBP11.46□□□□□ -0.58
GABRB3-225ENST00000638099 KDM6BO15054 1643 aa11.45□□□□□ -0.58
GABRB3-225ENST00000638099 HFM1A2PYH4 1435 aa11.45□□□□□ -0.58
GABRB3-225ENST00000638099 KIF14Q15058 1648 aa11.45□□□□□ -0.58
GABRB3-225ENST00000638099 CFDP1Q9UEE9 299 aaPredicted RBP11.44□□□□□ -0.58
GABRB3-225ENST00000638099 ERCC6L2Q5T890 1561 aa11.43□□□□□ -0.58
GABRB3-225ENST00000638099 PTPRGP23470 1445 aa11.42□□□□□ -0.58
GABRB3-225ENST00000638099 PLEKHD1A6NEE1 506 aa11.41□□□□□ -0.58
GABRB3-225ENST00000638099 TROQ12816 1431 aaPredicted RBP11.41□□□□□ -0.58
GABRB3-225ENST00000638099 TCOF1Q13428 1488 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms