RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 TNIKQ9UKE5 1360 aa13.14□□□□□ -0.31
CACNA1A-254ENST00000637952 MYT1LQ9UL68 1186 aa13.14□□□□□ -0.31
CACNA1A-254ENST00000637952 CDK11AQ9UQ88 783 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-254ENST00000637952 BIVM-ERCC5R4GMW8 1640 aa13.13□□□□□ -0.31
CACNA1A-254ENST00000637952 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
CACNA1A-254ENST00000637952 CARMIL2Q6F5E8 1435 aa13.11□□□□□ -0.31
CACNA1A-254ENST00000637952 CEP162Q5TB80 1403 aa13.09□□□□□ -0.31
CACNA1A-254ENST00000637952 ITGAEP38570 1179 aa13.08□□□□□ -0.32
CACNA1A-254ENST00000637952 KCNH8Q96L42 1107 aa13.08□□□□□ -0.32
CACNA1A-254ENST00000637952 THOC2Q8NI27 1593 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-254ENST00000637952 MAGI1Q96QZ7 1491 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-254ENST00000637952 SYNJ2O15056 1496 aa13.05□□□□□ -0.32
CACNA1A-254ENST00000637952 PLEKHD1A6NEE1 506 aa13.03□□□□□ -0.32
CACNA1A-254ENST00000637952 ERICH3Q5RHP9 1530 aa13.03□□□□□ -0.32
CACNA1A-254ENST00000637952 PRXQ9BXM0 1461 aa13.01□□□□□ -0.33
CACNA1A-254ENST00000637952 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
CACNA1A-254ENST00000637952 ZNF777Q9ULD5 760 aaPredicted RBP13.01□□□□□ -0.33
CACNA1A-254ENST00000637952 FAM50AQ14320 339 aaKnown RBP13□□□□□ -0.33
CACNA1A-254ENST00000637952 EIF4G3O43432 1585 aaKnown RBP13□□□□□ -0.33
CACNA1A-254ENST00000637952 PCGF6Q9BYE7 350 aa13□□□□□ -0.33
CACNA1A-254ENST00000637952 PTPRGP23470 1445 aa12.99□□□□□ -0.33
CACNA1A-254ENST00000637952 GRIN2AQ12879 1464 aa12.99□□□□□ -0.33
CACNA1A-254ENST00000637952 FHOD3Q2V2M9 1422 aa12.98□□□□□ -0.33
CACNA1A-254ENST00000637952 PRG4Q92954 1404 aaPredicted RBP12.98□□□□□ -0.33
CACNA1A-254ENST00000637952 MTUS2Q5JR59 1369 aa12.97□□□□□ -0.33
CACNA1A-254ENST00000637952 TARBP1Q13395 1621 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-254ENST00000637952 KIAA0586Q9BVV6 1533 aa12.94□□□□□ -0.34
CACNA1A-254ENST00000637952 CUL7Q14999 1698 aa12.92□□□□□ -0.34
CACNA1A-254ENST00000637952 FMN1Q68DA7 1419 aa12.91□□□□□ -0.34
CACNA1A-254ENST00000637952 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
CACNA1A-254ENST00000637952 KIF21BO75037 1637 aa12.9□□□□□ -0.34
CACNA1A-254ENST00000637952 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
CACNA1A-254ENST00000637952 TRIM26Q12899 539 aaPredicted RBP12.87□□□□□ -0.35
CACNA1A-254ENST00000637952 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
CACNA1A-254ENST00000637952 VPS8Q8N3P4 1428 aa12.84□□□□□ -0.35
CACNA1A-254ENST00000637952 IQGAP2Q13576 1575 aa12.84□□□□□ -0.35
CACNA1A-254ENST00000637952 PBRM1Q86U86 1689 aa12.84□□□□□ -0.35
CACNA1A-254ENST00000637952 WDR97A6NE52 1622 aa12.83□□□□□ -0.36
CACNA1A-254ENST00000637952 CFDP1Q9UEE9 299 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-254ENST00000637952 ARHGAP35Q9NRY4 1499 aa12.79□□□□□ -0.36
CACNA1A-254ENST00000637952 KANK4Q5T7N3 995 aaPredicted RBP12.79□□□□□ -0.36
CACNA1A-254ENST00000637952 NUP160Q12769 1436 aa12.79□□□□□ -0.36
CACNA1A-254ENST00000637952 FAM69CQ0P6D2 419 aa12.77□□□□□ -0.36
CACNA1A-254ENST00000637952 TSPY4P0CV99 314 aa12.77□□□□□ -0.37
CACNA1A-254ENST00000637952 TSPY10P0CW01 314 aa12.77□□□□□ -0.37
CACNA1A-254ENST00000637952 CHIC2Q9UKJ5 165 aa12.77□□□□□ -0.37
CACNA1A-254ENST00000637952 CCNB3Q8WWL7 1395 aa12.76□□□□□ -0.37
CACNA1A-254ENST00000637952 ARAP1Q96P48 1450 aa12.76□□□□□ -0.37
CACNA1A-254ENST00000637952 BCL11AQ9H165 835 aa12.75□□□□□ -0.37
CACNA1A-254ENST00000637952 TRIM52Q96A61 297 aa12.74□□□□□ -0.37
CACNA1A-254ENST00000637952 UACAQ9BZF9 1416 aa12.74□□□□□ -0.37
CACNA1A-254ENST00000637952 EFCAB5A4FU69 1503 aa12.73□□□□□ -0.37
CACNA1A-254ENST00000637952 CCER1Q8TC90 406 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-254ENST00000637952 DAXXQ9UER7 740 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-254ENST00000637952 PLB1Q6P1J6 1458 aa12.72□□□□□ -0.37
CACNA1A-254ENST00000637952 CEP170Q5SW79 1584 aa12.72□□□□□ -0.37
CACNA1A-254ENST00000637952 EFCAB2Q5VUJ9 269 aa12.71□□□□□ -0.37
CACNA1A-254ENST00000637952 CHD1O14646 1710 aa12.71□□□□□ -0.38
CACNA1A-254ENST00000637952 SCAF1Q9H7N4 1312 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-254ENST00000637952 CASKIN1Q8WXD9 1431 aa12.68□□□□□ -0.38
CACNA1A-254ENST00000637952 ESF1Q9H501 851 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-254ENST00000637952 PLPPR3Q6T4P5 718 aa12.67□□□□□ -0.38
CACNA1A-254ENST00000637952 CCDC18Q5T9S5 1454 aa12.66□□□□□ -0.38
CACNA1A-254ENST00000637952 UGGT2Q9NYU1 1516 aa12.65□□□□□ -0.38
CACNA1A-254ENST00000637952 RRP7BPQ9NSQ0 103 aa12.64□□□□□ -0.39
CACNA1A-254ENST00000637952 ARID4BQ4LE39 1312 aaPredicted RBP12.64□□□□□ -0.39
CACNA1A-254ENST00000637952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.63□□□□□ -0.39
CACNA1A-254ENST00000637952 CTTNBP2Q8WZ74 1663 aa12.63□□□□□ -0.39
CACNA1A-254ENST00000637952 HNRNPMP52272 730 aaKnown RBP eCLIP12.63□□□□□ -0.39
CACNA1A-254ENST00000637952 DISP1Q96F81 1524 aa12.62□□□□□ -0.39
CACNA1A-254ENST00000637952 FYCO1Q9BQS8 1478 aa12.61□□□□□ -0.39
CACNA1A-254ENST00000637952 ERICH6Q7L0X2 663 aa12.6□□□□□ -0.39
CACNA1A-254ENST00000637952 ARHGEF11O15085 1522 aa12.6□□□□□ -0.39
CACNA1A-254ENST00000637952 KIAA0556O60303 1618 aa12.6□□□□□ -0.39
CACNA1A-254ENST00000637952 CDK13Q14004 1512 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-254ENST00000637952 EPRSP07814 1512 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-254ENST00000637952 MLECQ14165 292 aa12.56□□□□□ -0.4
CACNA1A-254ENST00000637952 HECW1Q76N89 1606 aa12.56□□□□□ -0.4
CACNA1A-254ENST00000637952 TROQ12816 1431 aaPredicted RBP12.55□□□□□ -0.4
CACNA1A-254ENST00000637952 ERCC6L2Q5T890 1561 aa12.55□□□□□ -0.4
CACNA1A-254ENST00000637952 ZNF644Q9H582 1327 aaPredicted RBP12.55□□□□□ -0.4
CACNA1A-254ENST00000637952 ATP10BO94823 1461 aa12.55□□□□□ -0.4
CACNA1A-254ENST00000637952 LRRC9Q6ZRR7 1453 aa12.54□□□□□ -0.4
CACNA1A-254ENST00000637952 PCF11O94913 1555 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-254ENST00000637952 SPAG9O60271 1321 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-254ENST00000637952 ASXL2Q76L83 1435 aa12.52□□□□□ -0.4
CACNA1A-254ENST00000637952 RSPH4AQ5TD94 716 aa12.51□□□□□ -0.41
CACNA1A-254ENST00000637952 NUP153P49790 1475 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-254ENST00000637952 CD109Q6YHK3 1445 aa12.51□□□□□ -0.41
CACNA1A-254ENST00000637952 RAPGEF6Q8TEU7 1601 aa12.51□□□□□ -0.41
CACNA1A-254ENST00000637952 AFAP1Q8N556 730 aa12.5□□□□□ -0.41
CACNA1A-254ENST00000637952 CLASP1Q7Z460 1538 aa12.5□□□□□ -0.41
CACNA1A-254ENST00000637952 GGT6Q6P531 493 aa12.5□□□□□ -0.41
CACNA1A-254ENST00000637952 ABCC2Q92887 1545 aa12.5□□□□□ -0.41
CACNA1A-254ENST00000637952 NCOA2Q15596 1464 aa12.5□□□□□ -0.41
CACNA1A-254ENST00000637952 NEUROD1Q13562 356 aa12.49□□□□□ -0.41
CACNA1A-254ENST00000637952 RAPGEF3O95398 923 aa12.49□□□□□ -0.41
CACNA1A-254ENST00000637952 PHLDB1Q86UU1 1377 aa12.48□□□□□ -0.41
CACNA1A-254ENST00000637952 CHGAP10645 457 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-254ENST00000637952 ARHGAP5Q13017 1502 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms