RNA–Protein interactions for RNA: ENST00000637535.1

CACNB4-256, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,731 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-256	ENST00000637535	PBRM1	Q86U86	1689 aa		11.74	□□□□□ -0.53
CACNB4-256	ENST00000637535	SUPT5H	O00267	1087 aa	Known RBP	11.74	□□□□□ -0.53
CACNB4-256	ENST00000637535	SYNJ2	O15056	1496 aa		11.74	□□□□□ -0.53
CACNB4-256	ENST00000637535	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNB4-256	ENST00000637535	WDR97	A6NE52	1622 aa		11.73	□□□□□ -0.53
CACNB4-256	ENST00000637535	GAPVD1	Q14C86	1478 aa		11.72	□□□□□ -0.53
CACNB4-256	ENST00000637535	ERCC6L2	Q5T890	1561 aa		11.72	□□□□□ -0.53
CACNB4-256	ENST00000637535	ABCA5	Q8WWZ7	1642 aa		11.66	□□□□□ -0.54
CACNB4-256	ENST00000637535	ABCA10	Q8WWZ4	1543 aa		11.65	□□□□□ -0.54
CACNB4-256	ENST00000637535	CEP170	Q5SW79	1584 aa		11.63	□□□□□ -0.55
CACNB4-256	ENST00000637535	GRIN2A	Q12879	1464 aa		11.62	□□□□□ -0.55
CACNB4-256	ENST00000637535	ADAMTS12	P58397	1594 aa		11.59	□□□□□ -0.55
CACNB4-256	ENST00000637535	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.58	□□□□□ -0.56
CACNB4-256	ENST00000637535	NUP160	Q12769	1436 aa		11.57	□□□□□ -0.56
CACNB4-256	ENST00000637535	HRC	P23327	699 aa		11.56	□□□□□ -0.56
CACNB4-256	ENST00000637535	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.54	□□□□□ -0.56
CACNB4-256	ENST00000637535	KIF13A	Q9H1H9	1805 aa		11.54	□□□□□ -0.56
CACNB4-256	ENST00000637535	TOP2B	Q02880	1626 aa		11.54	□□□□□ -0.56
CACNB4-256	ENST00000637535	BIVM-ERCC5	R4GMW8	1640 aa		11.53	□□□□□ -0.56
CACNB4-256	ENST00000637535	FHAD1	B1AJZ9	1412 aa		11.53	□□□□□ -0.56
CACNB4-256	ENST00000637535	PRG4	Q92954	1404 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNB4-256	ENST00000637535	SHROOM2	Q13796	1616 aa		11.53	□□□□□ -0.56
CACNB4-256	ENST00000637535	DCAF8L1	A6NGE4	600 aa		11.52	□□□□□ -0.56
CACNB4-256	ENST00000637535	JPH4	Q96JJ6	628 aa		11.52	□□□□□ -0.57
CACNB4-256	ENST00000637535	FAM69C	Q0P6D2	419 aa		11.49	□□□□□ -0.57
CACNB4-256	ENST00000637535	ERICH3	Q5RHP9	1530 aa		11.48	□□□□□ -0.57
CACNB4-256	ENST00000637535	TSPOAP1	O95153	1857 aa		11.44	□□□□□ -0.58
CACNB4-256	ENST00000637535	NPM1	P06748	294 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
CACNB4-256	ENST00000637535	RUSC2	Q8N2Y8	1516 aa		11.43	□□□□□ -0.58
CACNB4-256	ENST00000637535	ADCY10	Q96PN6	1610 aa		11.41	□□□□□ -0.58
CACNB4-256	ENST00000637535	ABCC10	Q5T3U5	1492 aa		11.4	□□□□□ -0.58
CACNB4-256	ENST00000637535	DIP2B	Q9P265	1576 aa		11.39	□□□□□ -0.59
CACNB4-256	ENST00000637535	KDM4F	A0A1W2PPD8	638 aa		11.38	□□□□□ -0.59
CACNB4-256	ENST00000637535	IGF1R	P08069	1367 aa		11.37	□□□□□ -0.59
CACNB4-256	ENST00000637535	MAPKBP1	O60336	1514 aa		11.35	□□□□□ -0.59
CACNB4-256	ENST00000637535	KDM6B	O15054	1643 aa		11.35	□□□□□ -0.59
CACNB4-256	ENST00000637535	KIAA0586	Q9BVV6	1533 aa		11.33	□□□□□ -0.6
CACNB4-256	ENST00000637535	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.32	□□□□□ -0.6
CACNB4-256	ENST00000637535	PTPRG	P23470	1445 aa		11.31	□□□□□ -0.6
CACNB4-256	ENST00000637535	KIF27	Q86VH2	1401 aa		11.31	□□□□□ -0.6
CACNB4-256	ENST00000637535	CARMIL1	Q5VZK9	1371 aa		11.29	□□□□□ -0.6
CACNB4-256	ENST00000637535	CUL7	Q14999	1698 aa		11.28	□□□□□ -0.6
CACNB4-256	ENST00000637535	ASXL2	Q76L83	1435 aa		11.26	□□□□□ -0.61
CACNB4-256	ENST00000637535	PPRC1	Q5VV67	1664 aa	Known RBP	11.25	□□□□□ -0.61
CACNB4-256	ENST00000637535	TNIK	Q9UKE5	1360 aa		11.25	□□□□□ -0.61
CACNB4-256	ENST00000637535	ABCC2	Q92887	1545 aa		11.24	□□□□□ -0.61
CACNB4-256	ENST00000637535	CACNB1	Q02641	598 aa	Predicted RBP	11.23	□□□□□ -0.61
CACNB4-256	ENST00000637535	ILDR1	Q86SU0	546 aa	Predicted RBP	11.23	□□□□□ -0.61
CACNB4-256	ENST00000637535	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.23	□□□□□ -0.61
CACNB4-256	ENST00000637535	CARMIL2	Q6F5E8	1435 aa		11.23	□□□□□ -0.61
CACNB4-256	ENST00000637535	IQGAP2	Q13576	1575 aa		11.22	□□□□□ -0.61
CACNB4-256	ENST00000637535	POTEH	Q6S545	545 aa		11.21	□□□□□ -0.61
CACNB4-256	ENST00000637535	DISP1	Q96F81	1524 aa		11.21	□□□□□ -0.61
CACNB4-256	ENST00000637535	UACA	Q9BZF9	1416 aa		11.2	□□□□□ -0.62
CACNB4-256	ENST00000637535	ADGRL1	O94910	1474 aa		11.2	□□□□□ -0.62
CACNB4-256	ENST00000637535	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.2	□□□□□ -0.62	6e-7	■■■■■ 26.8
CACNB4-256	ENST00000637535	SLC4A2	P04920	1241 aa		11.19	□□□□□ -0.62
CACNB4-256	ENST00000637535	PLB1	Q6P1J6	1458 aa		11.19	□□□□□ -0.62
CACNB4-256	ENST00000637535	EPRS	P07814	1512 aa	Known RBP	11.17	□□□□□ -0.62
CACNB4-256	ENST00000637535	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.17	□□□□□ -0.62
CACNB4-256	ENST00000637535	KCNH8	Q96L42	1107 aa		11.17	□□□□□ -0.62
CACNB4-256	ENST00000637535	GLI2	P10070	1586 aa		11.17	□□□□□ -0.62
CACNB4-256	ENST00000637535	ARID3C	A6NKF2	412 aa		11.16	□□□□□ -0.62
CACNB4-256	ENST00000637535	UHRF1BP1L	A0JNW5	1464 aa		11.16	□□□□□ -0.62
CACNB4-256	ENST00000637535	MAP3K4	Q9Y6R4	1608 aa		11.15	□□□□□ -0.63
CACNB4-256	ENST00000637535	RNF39	Q9H2S5	420 aa		11.15	□□□□□ -0.63
CACNB4-256	ENST00000637535	RAPGEF2	Q9Y4G8	1499 aa		11.14	□□□□□ -0.63
CACNB4-256	ENST00000637535	KDM5B	Q9UGL1	1544 aa		11.14	□□□□□ -0.63
CACNB4-256	ENST00000637535	KIAA0556	O60303	1618 aa		11.13	□□□□□ -0.63
CACNB4-256	ENST00000637535	UGGT2	Q9NYU1	1516 aa		11.12	□□□□□ -0.63
CACNB4-256	ENST00000637535	HECW2	Q9P2P5	1572 aa		11.11	□□□□□ -0.63
CACNB4-256	ENST00000637535	P3H3	Q8IVL6	736 aa		11.1	□□□□□ -0.63
CACNB4-256	ENST00000637535	WDR7	Q9Y4E6	1490 aa		11.09	□□□□□ -0.63
CACNB4-256	ENST00000637535	TEX14	Q8IWB6	1497 aa		11.09	□□□□□ -0.63
CACNB4-256	ENST00000637535	CTTNBP2	Q8WZ74	1663 aa		11.07	□□□□□ -0.64
CACNB4-256	ENST00000637535	CD109	Q6YHK3	1445 aa		11.07	□□□□□ -0.64
CACNB4-256	ENST00000637535	EHMT2	Q96KQ7	1210 aa		11.06	□□□□□ -0.64
CACNB4-256	ENST00000637535	KIF21B	O75037	1637 aa		11.05	□□□□□ -0.64
CACNB4-256	ENST00000637535	RANGAP1	P46060	587 aa	Predicted RBP	11.04	□□□□□ -0.64
CACNB4-256	ENST00000637535		U3KPZ7	1027 aa	Predicted RBP	11.04	□□□□□ -0.64
CACNB4-256	ENST00000637535	ABCA8	O94911	1581 aa		11.03	□□□□□ -0.64
CACNB4-256	ENST00000637535	CFAP43	Q8NDM7	1665 aa		11.02	□□□□□ -0.65
CACNB4-256	ENST00000637535	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.01	□□□□□ -0.65
CACNB4-256	ENST00000637535	MAGI3	Q5TCQ9	1506 aa		11.01	□□□□□ -0.65
CACNB4-256	ENST00000637535	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11	□□□□□ -0.65
CACNB4-256	ENST00000637535	RAPGEF3	O95398	923 aa		11	□□□□□ -0.65
CACNB4-256	ENST00000637535	C1QBP	Q07021	282 aa	Known RBP	11	□□□□□ -0.65
CACNB4-256	ENST00000637535	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11	□□□□□ -0.65
CACNB4-256	ENST00000637535	ZBTB22	O15209	634 aa		10.99	□□□□□ -0.65
CACNB4-256	ENST00000637535	FOXD4L1	Q9NU39	408 aa		10.99	□□□□□ -0.65
CACNB4-256	ENST00000637535	GOLGA3	Q08378	1498 aa		10.99	□□□□□ -0.65
CACNB4-256	ENST00000637535	ATP10B	O94823	1461 aa		10.98	□□□□□ -0.65
CACNB4-256	ENST00000637535	PRX	Q9BXM0	1461 aa		10.97	□□□□□ -0.65
CACNB4-256	ENST00000637535	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.95	□□□□□ -0.66
CACNB4-256	ENST00000637535	ARAP3	Q8WWN8	1544 aa		10.93	□□□□□ -0.66
CACNB4-256	ENST00000637535	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.92	□□□□□ -0.66
CACNB4-256	ENST00000637535	PTPRM	P28827	1452 aa		10.92	□□□□□ -0.66
CACNB4-256	ENST00000637535	PRKCSH	P14314	528 aa	Predicted RBP	10.91	□□□□□ -0.66
CACNB4-256	ENST00000637535	ABCA9	Q8IUA7	1624 aa		10.91	□□□□□ -0.66
CACNB4-256	ENST00000637535	ADAMTSL3	P82987	1691 aa		10.9	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms