RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 MIER1Q8N108 512 aa23.57■■□□□ 1.36
CHRNA7-221ENST00000636898 CUL7Q14999 1698 aa23.57■■□□□ 1.36
CHRNA7-221ENST00000636898 GTF3C3Q9Y5Q9 886 aa23.56■■□□□ 1.36
CHRNA7-221ENST00000636898 EFCAB5A4FU69 1503 aa23.55■■□□□ 1.36
CHRNA7-221ENST00000636898 RAD54L2Q9Y4B4 1467 aa23.53■■□□□ 1.36
CHRNA7-221ENST00000636898 PCF11O94913 1555 aaKnown RBP23.52■■□□□ 1.36
CHRNA7-221ENST00000636898 LAMC3Q9Y6N6 1575 aa23.5■■□□□ 1.35
CHRNA7-221ENST00000636898 AQRO60306 1485 aaKnown RBP eCLIP23.48■■□□□ 1.35
CHRNA7-221ENST00000636898 FYCO1Q9BQS8 1478 aa23.48■■□□□ 1.35
CHRNA7-221ENST00000636898 CTTNBP2Q8WZ74 1663 aa23.48■■□□□ 1.35
CHRNA7-221ENST00000636898 NESP48681 1621 aa23.47■■□□□ 1.35
CHRNA7-221ENST00000636898 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
CHRNA7-221ENST00000636898 RAB3GAP2Q9H2M9 1393 aa23.46■■□□□ 1.35
CHRNA7-221ENST00000636898 PHLDB1Q86UU1 1377 aa23.45■■□□□ 1.34
CHRNA7-221ENST00000636898 CASKIN1Q8WXD9 1431 aa23.43■■□□□ 1.34
CHRNA7-221ENST00000636898 SETD5Q9C0A6 1442 aa23.43■■□□□ 1.34
CHRNA7-221ENST00000636898 ITGAEP38570 1179 aa23.4■■□□□ 1.34
CHRNA7-221ENST00000636898 FHOD3Q2V2M9 1422 aa23.4■■□□□ 1.34
CHRNA7-221ENST00000636898 MAPKBP1O60336 1514 aa23.4■■□□□ 1.34
CHRNA7-221ENST00000636898 YTHDC1Q96MU7 727 aaKnown RBP23.39■■□□□ 1.34
CHRNA7-221ENST00000636898 URB2Q14146 1524 aaKnown RBP23.38■■□□□ 1.33
CHRNA7-221ENST00000636898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.38■■□□□ 1.33
CHRNA7-221ENST00000636898 ABCA5Q8WWZ7 1642 aa23.36■■□□□ 1.33
CHRNA7-221ENST00000636898 FMN1Q68DA7 1419 aa23.36■■□□□ 1.33
CHRNA7-221ENST00000636898 P3H3Q8IVL6 736 aa23.34■■□□□ 1.33
CHRNA7-221ENST00000636898 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
CHRNA7-221ENST00000636898 SAMD9Q5K651 1589 aa23.3■■□□□ 1.32
CHRNA7-221ENST00000636898 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
CHRNA7-221ENST00000636898 FAM50AQ14320 339 aaKnown RBP23.28■■□□□ 1.32
CHRNA7-221ENST00000636898 GAPVD1Q14C86 1478 aa23.26■■□□□ 1.31
CHRNA7-221ENST00000636898 ATP1B4Q9UN42 357 aaPredicted RBP23.24■■□□□ 1.31
CHRNA7-221ENST00000636898 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
CHRNA7-221ENST00000636898 TIMELESSQ9UNS1 1208 aa23.21■■□□□ 1.31
CHRNA7-221ENST00000636898 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
CHRNA7-221ENST00000636898 FGD6Q6ZV73 1430 aa23.21■■□□□ 1.31
CHRNA7-221ENST00000636898 KIF21AQ7Z4S6 1674 aa23.18■■□□□ 1.3
CHRNA7-221ENST00000636898 GRIN2BQ13224 1484 aa23.16■■□□□ 1.3
CHRNA7-221ENST00000636898 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
CHRNA7-221ENST00000636898 LRRIQ1Q96JM4 1722 aa23.15■■□□□ 1.3
CHRNA7-221ENST00000636898 MTUS2Q5JR59 1369 aa23.14■■□□□ 1.3
CHRNA7-221ENST00000636898 EHBP1L1Q8N3D4 1523 aa23.1■■□□□ 1.29
CHRNA7-221ENST00000636898 SUPT6HQ7KZ85 1726 aaKnown RBP23.09■■□□□ 1.29
CHRNA7-221ENST00000636898 HFM1A2PYH4 1435 aa23.09■■□□□ 1.29
CHRNA7-221ENST00000636898 MYOM3Q5VTT5 1437 aa23.07■■□□□ 1.28
CHRNA7-221ENST00000636898 NCOA2Q15596 1464 aa23.07■■□□□ 1.28
CHRNA7-221ENST00000636898 SIN3AQ96ST3 1273 aa23.07■■□□□ 1.28
CHRNA7-221ENST00000636898 PBRM1Q86U86 1689 aa23.05■■□□□ 1.28
CHRNA7-221ENST00000636898 CCDC18Q5T9S5 1454 aa23.05■■□□□ 1.28
CHRNA7-221ENST00000636898 PTPN23Q9H3S7 1636 aa23.04■■□□□ 1.28
CHRNA7-221ENST00000636898 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
CHRNA7-221ENST00000636898 UACAQ9BZF9 1416 aa23.02■■□□□ 1.28
CHRNA7-221ENST00000636898 UGGT2Q9NYU1 1516 aa23.02■■□□□ 1.27
CHRNA7-221ENST00000636898 PTPRKQ15262 1439 aa23.01■■□□□ 1.27
CHRNA7-221ENST00000636898 PPP1R15AO75807 674 aaPredicted RBP22.99■■□□□ 1.27
CHRNA7-221ENST00000636898 HECW1Q76N89 1606 aa22.98■■□□□ 1.27
CHRNA7-221ENST00000636898 ADAMTS12P58397 1594 aa22.98■■□□□ 1.27
CHRNA7-221ENST00000636898 IQGAP2Q13576 1575 aa22.98■■□□□ 1.27
CHRNA7-221ENST00000636898 DNAJC5BQ9UF47 199 aa22.97■■□□□ 1.27
CHRNA7-221ENST00000636898 NAIPQ13075 1403 aa22.97■■□□□ 1.27
CHRNA7-221ENST00000636898 TCOF1Q13428 1488 aaKnown RBP22.94■■□□□ 1.26
CHRNA7-221ENST00000636898 MAGI3Q5TCQ9 1506 aa22.94■■□□□ 1.26
CHRNA7-221ENST00000636898 MRC2Q9UBG0 1479 aa22.93■■□□□ 1.26
CHRNA7-221ENST00000636898 TONSLQ96HA7 1378 aa22.9■■□□□ 1.26
CHRNA7-221ENST00000636898 EPRSP07814 1512 aaKnown RBP22.89■■□□□ 1.25
CHRNA7-221ENST00000636898 AKNAQ7Z591 1439 aa22.88■■□□□ 1.25
CHRNA7-221ENST00000636898 GCC2Q8IWJ2 1684 aa22.87■■□□□ 1.25
CHRNA7-221ENST00000636898 WDR62O43379 1518 aa22.86■■□□□ 1.25
CHRNA7-221ENST00000636898 DDX10Q13206 875 aaKnown RBP22.85■■□□□ 1.25
CHRNA7-221ENST00000636898 MIA2Q96PC5 1412 aa22.85■■□□□ 1.25
CHRNA7-221ENST00000636898 IFT140Q96RY7 1462 aa22.82■■□□□ 1.24
CHRNA7-221ENST00000636898 SUPT16HQ9Y5B9 1047 aaKnown RBP22.79■■□□□ 1.24
CHRNA7-221ENST00000636898 KCNH8Q96L42 1107 aa22.77■■□□□ 1.24
CHRNA7-221ENST00000636898 CDK13Q14004 1512 aaKnown RBP22.77■■□□□ 1.24
CHRNA7-221ENST00000636898 KDM5BQ9UGL1 1544 aa22.77■■□□□ 1.24
CHRNA7-221ENST00000636898 CCER2I3L3R5 266 aa22.76■■□□□ 1.23
CHRNA7-221ENST00000636898 KIAA0586Q9BVV6 1533 aa22.75■■□□□ 1.23
CHRNA7-221ENST00000636898 KIAA0556O60303 1618 aa22.73■■□□□ 1.23
CHRNA7-221ENST00000636898 ZNF608Q9ULD9 1512 aaPredicted RBP22.71■■□□□ 1.23
CHRNA7-221ENST00000636898 DISP1Q96F81 1524 aa22.7■■□□□ 1.22
CHRNA7-221ENST00000636898 DENND4BO75064 1496 aaPredicted RBP22.7■■□□□ 1.22
CHRNA7-221ENST00000636898 ANP32CO43423 234 aa22.7■■□□□ 1.22
CHRNA7-221ENST00000636898 RRP7BPQ9NSQ0 103 aa22.69■■□□□ 1.22
CHRNA7-221ENST00000636898 HIRIP3Q9BW71 556 aaPredicted RBP22.68■■□□□ 1.22
CHRNA7-221ENST00000636898 ROCK1Q13464 1354 aa22.67■■□□□ 1.22
CHRNA7-221ENST00000636898 KDM6BO15054 1643 aa22.66■■□□□ 1.22
CHRNA7-221ENST00000636898 GRIN2AQ12879 1464 aa22.65■■□□□ 1.22
CHRNA7-221ENST00000636898 CHIC2Q9UKJ5 165 aa22.65■■□□□ 1.22
CHRNA7-221ENST00000636898 RAPGEF6Q8TEU7 1601 aa22.64■■□□□ 1.22
CHRNA7-221ENST00000636898 NUP153P49790 1475 aaKnown RBP22.64■■□□□ 1.21
CHRNA7-221ENST00000636898 EIF4G3O43432 1585 aaKnown RBP22.63■■□□□ 1.21
CHRNA7-221ENST00000636898 DNMT1P26358 1616 aaKnown RBP22.63■■□□□ 1.21
CHRNA7-221ENST00000636898 DAPK1P53355 1430 aa22.62■■□□□ 1.21
CHRNA7-221ENST00000636898 TRIM52Q96A61 297 aa22.6■■□□□ 1.21
CHRNA7-221ENST00000636898 MPHOSPH9Q99550 1183 aa22.59■■□□□ 1.21
CHRNA7-221ENST00000636898 CDK11AQ9UQ88 783 aaPredicted RBP22.58■■□□□ 1.21
CHRNA7-221ENST00000636898 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.21
CHRNA7-221ENST00000636898 ABCC5O15440 1437 aa22.57■■□□□ 1.2
CHRNA7-221ENST00000636898 ARID3CA6NKF2 412 aa22.52■■□□□ 1.2
CHRNA7-221ENST00000636898 TROQ12816 1431 aaPredicted RBP22.51■■□□□ 1.19
CHRNA7-221ENST00000636898 ITSN2Q9NZM3 1697 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms